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LOCUS XM_070218931 4878 bp mRNA linear INV 09-DEC-2024 (LOC108068075), transcript variant X6, mRNA. ACCESSION XM_070218931 VERSION XM_070218931.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4878 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4878 /gene="LOC108068075" /note="uncharacterized LOC108068075; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068075" CDS 263..3874 /gene="LOC108068075" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_070075032.1" /db_xref="GeneID:108068075" /translation="MASLTLHLIVIALLASTALSKAATPTPTTTTPTTSTTTTTVTRQ RGRGVAFQGEGLRLGGVASVSASTTSTEAPTLRAPRQRRPPTTKSIDITVTVTPIRSR GRSGSAATPLPPVSTTTTAAARLLQRRRSSTSSTTTTTGATPAAGRSSRDRGSVRGPR QPRDTPDSSIRRSWQSAQAPTATPYHAQTPTFSSSGSSSSTSSGGTTSSRGALKTPRM IQRLVAGHIHNAQGHSTYEVSAVSANSSSSSYNPSTSASWSSTSTSSSTSSTSSTTTT TRQPPLKSKASSSYRLAKPSIRPRLSSTVAPSRFSNPPSTSRSTTPLPPTSSNTPNPF KDDDNDDEALLNEPDDFDDNWDNGILRLSAGSGKEAEAPAKKAPGGAKEDQKKTLADQ VRDGKYGLIERELFRRVPKRPGVLSYARNSEVPLDNERNYGGLNEEDIWLAEDHLLVI KGGSLNEETDDNQPGGGGLPWPAIDDYDAPGRQIKLPANPAVPPPFPVQLEPHGPLQL IRDNQLEILRPAAGNATLSGMVNHQSDQGAGAGEDLASHPVARTGATAAATSAKSKEA KESPSYVYPAPYAPWLLYPANETTSKGGLLRSPPLLGPWLINGLNGLNASLVSGGDSQ TNLSDFDEDDPSLYYPPAYTFVYKSNYSNPVPPGPLVPGIVLPPPPDHFSRLEGSSTR KPPTSTTSTSSTTSSTTTTTTTTSTTRPPLPIRTSYKPKYNGITYLPPHPRQKQYVER VPVPVAVPIPIYPVNYTPRPQLVFVPSSTEEPGSGSGSRDPPLSKSNPIYYEYFEAKR QPGSIKSNVIDDFLATKPPKRHHHGQSNQIYGHHHHQREHLQHYKASPSPANDVATAA EVVNITPKPRTAQLQLHAEYEASLGQLLRSNLISPQEAGGGVAVGAHPGRFQAPDFDK QPFLPMVNYSADEQDQNAFKAIVYQPNPNPSLNPNPVQRQRHLRVGKQQLQLEPSNLE ASPPQDSYLPGRHFRVGKQQHQQQQQQIYEPQVYSTPIPQFVDDPQQLRPPSPVQSNP LQFWQRPPPQFKRVRPSSKQGHPHVHPHYPPYYVPGYPSAPAGEPLYRLVPVAQHKHW RNKQTQQQQVQSQPIQVQAQHHNQNHNQGYPDRSVNIGHSLAGDILVNYNTNNQFNPQ AELVPQAQLAAPPPPPPPLSYQAQSGQPLWSERERREGDRERDRDRERSVRQSREQQ" misc_feature 440..>835 /gene="LOC108068075" /note="BDLF3; Provisional; Region: PHA03255" /db_xref="CDD:165513" ORIGIN 1 ttgggcaaaa aaaaacacga acagcgggct aaaaaaatga attgagtcca atttaatcta 61 tgacaccatc gccccaaact gctttcaaat aaactaatta aatttaagta aagcaacagg 121 cgcagcaaca acaaagaatt atttattgcc aatagccaaa gacaacaacg ttgcctttca 181 ttcaaaagca caaagcctac gagtaaaaaa tttataagaa aggcaggctg tttttgtata 241 gccgaagtgg gatacccttg aaatggcatc gttaaccttg cacttgatag tgatagctct 301 gctggcgtcg actgcgctgt caaaggcggc gacaccaaca ccaacaacaa ccacaccaac 361 aacatctaca acaacaacaa cagtgacgcg acagcgcggc agaggcgtcg ccttccaggg 421 ggaggggctg cggctggggg gcgtggcatc tgtatctgca tccacaacca gcacagaggc 481 gccaacgttg cgggcaccgc gtcagcgtcg tccgcccacg acgaaatcga tcgatataac 541 ggtgacggtg accccgattc gcagtcgcgg tcgcagtggc agcgcagcga cgcctctgcc 601 gccggtcagc acaacaacaa ctgctgctgc taggctgctg cagcgacgtc gcagcagcac 661 ttccagtaca acaacaacaa caggagcaac tccagcagct ggaagatctt ccagggatcg 721 tggaagtgtg agggggccac gacaaccgcg cgatacgccc gattcgagca ttcgacggag 781 ttggcagtcc gcccaagcgc ccaccgccac cccctaccac gcccaaacac ccactttcag 841 ttccagtggc agttccagtt ccacttccag tggcggtacc acttccagtc gaggcgcact 901 gaaaacgccg cgaatgatcc agcgcctggt ggccggtcac atccacaatg cccagggaca 961 ctccacctac gaggtgtcgg cggtcagtgc caacagctcc tcgtctagtt ataatccttc 1021 gacgagtgcc agttggagtt ccacttccac ttccagttcc acttcctcca cttcctccac 1081 gacgacgacg acgaggcagc cgcctttgaa gagcaaggcg agcagcagct accgactggc 1141 caaaccctcg atcaggccga gattgagcag cacagtggcc cccagtcgct tcagtaatcc 1201 gcccagtacc tcgagatcca ccactcccct gccgccgacg agttccaata ccccgaatcc 1261 ttttaaggac gacgacaacg atgatgaggc gctgctgaac gaaccggatg acttcgacga 1321 caactgggac aatgggatcc tgcggctgag cgccggttcg ggcaaggagg cggaggcgcc 1381 ggccaagaag gccccaggag gagccaagga ggaccagaag aagacgctgg ccgaccaggt 1441 gagggacggc aagtatggac tgatcgaaag ggagctcttc cgtcgcgttc ccaagcgtcc 1501 gggagtgctg agctatgccc gcaactcgga ggttccgctg gacaatgagc gcaactatgg 1561 aggcctcaac gaggaggaca tctggctggc cgaggatcac ctgctggtga tcaagggtgg 1621 ctccctcaac gaggagaccg atgacaatca gccggggggt ggtggcctgc cctggccggc 1681 catcgatgac tacgatgcgc cgggaaggca gatcaagttg ccagccaatc cagctgtgcc 1741 gcctccattt cccgtgcagc tcgagccgca tgggccgctg cagcttatcc gagataatca 1801 actcgagatc ctccgtccgg cggctggcaa tgcaacgcta tccgggatgg tcaaccacca 1861 gagcgaccag ggcgccggcg ccggcgaaga tctcgcatcg catcctgttg cccggacggg 1921 agcgactgca gcagctacgt cggctaagtc caaggaggcc aaggaatccc cctcctatgt 1981 ttatcccgcg ccctatgccc cctggctgct ctaccccgcc aacgagacga cgtccaaagg 2041 cgggttgctg agatcgccgc cgcttttggg accctggctg atcaacgggc tgaatggctt 2101 gaatgcctct ctagtttctg gcggggattc ccaaacgaat ctgagcgatt tcgacgagga 2161 cgatccctca ctctactatc caccagccta cacgtttgtc tacaagtcca actactcgaa 2221 tccggtgcca ccgggtccct tggtgcccgg catagtcctg ccaccgccgc cggatcactt 2281 cagtcgactg gagggcagca gcaccaggaa accacccaca agcactactt ctacaagtag 2341 tactacttct agcactacta ctactactac tactaccagt accacacgac caccgctgcc 2401 cattcgcacc tcgtacaagc ccaagtacaa tgggatcacc tatctgccgc cgcatccgag 2461 gcagaaacag tatgtggagc gagtgcccgt tccggtggca gtgcccatac ccatttaccc 2521 cgtcaactat acgccgcgtc cccagctggt ctttgtgccc agctccacgg aggaaccggg 2581 atcgggttcg ggatctcgag atcccccgct ctccaagtcg aaccccatct actacgagta 2641 cttcgaggcc aagcggcagc cgggctccat caagtccaac gtcatcgacg acttcctggc 2701 caccaagccg cccaagcggc atcatcatgg ccagagtaac cagatatatg gccaccatca 2761 ccatcagcgg gagcatctgc agcactacaa ggcgtcgccg agtccggcaa acgatgtggc 2821 caccgccgcc gaggtggtca acatcacgcc caagcccagg accgcccagc tgcagctgca 2881 cgcggagtac gaggcgtccc tgggccagct gctcaggagc aacctcatct cgccccagga 2941 agcaggagga ggagtggcag tcggagccca tccggggcga ttccaggccc ccgactttga 3001 caagcagccc ttcctgccca tggtgaacta cagtgcggac gagcaggacc agaacgcctt 3061 caaggccatc gtttaccagc ccaatcccaa tcccagtctg aatcccaatc ccgtccagcg 3121 gcagcgtcac ctgcgtgttg gcaagcagca gctgcagctg gagcccagca acttggaggc 3181 ctctccgccg caggactcct atctgccggg tcgccacttc cgggtgggca agcagcagca 3241 ccagcagcag cagcagcaga tctacgagcc gcaggtctac agcaccccaa ttccccagtt 3301 tgtggacgat ccgcagcaac taaggccccc atctccggtc caatcgaatc ctttgcagtt 3361 ctggcagcga cctccgccgc agtttaaaag ggtgcgaccc agcagcaagc agggtcaccc 3421 tcatgtccat ccccattatc cgccgtacta tgtgcccggc tatcccagtg ctccggcggg 3481 ggaacccctg taccgcctgg tgcccgtggc ccagcacaag cactggagga acaagcagac 3541 gcagcagcag caggtgcaat cgcagcccat ccaggtgcag gcccagcatc acaatcagaa 3601 tcacaaccag ggttatcccg atcggagcgt taatattgga cacagtctcg ccggcgacat 3661 cctcgtcaac tacaacacca acaatcagtt caatccgcag gcggaactgg tgccccaggc 3721 ccagttggcc gccccccctc cgccgccgcc gccgctgtcc tatcaggccc aaagtggcca 3781 gcccctgtgg tccgaaaggg agaggaggga gggagatcgg gagcgggatc gggatcggga 3841 gcgatcggtg agacagtcca gggaacagca gtagtactta tatatcttaa aaatccgagt 3901 aatcatgtcg ataatgatgg tttctatgtc attgataaac gtagtgtcaa aatgtgatct 3961 atagggaggc caatccgcaa ttctttttca ttcaatacca tttcatatca ttcacaacca 4021 atcccgatta tggtctcatt ttcgtatttg aacattttta tttttataac ccgaaatatt 4081 cctctcgaaa tcgctgaaaa attgaattct tcaaaatgat ttcttttatt cgataaaatc 4141 atcattttaa tgggtgtttt gtgggcgttt cttctttgcc gcttccattt cgacttttat 4201 ttaagctccc agtttatttc gcgttctttg ctaccactaa caaatagtta cgttacgtag 4261 agctggtcat ttaagagata aaccccgatt tggtcctgct gtgctgccaa cgtctcgatg 4321 gcgatcgaca atcgatacat atcgccaatc gctgacagag ttgcaacaag caaatacaca 4381 tacatatata tttataccat atataagtgt agctatatcc ctatgcggta ataatatata 4441 ttcacaaacc tatgtaaata aaaaacgagt gtaggcgcta ccgacaccac ttagtcctag 4501 gggcagtaaa atatgtgcat caatgtatgt atactttatc gataccgtta ccgatgtcga 4561 tatcgaacga aggatccttc gcttagccgt agctatctgt tttatcctgc acacacacta 4621 tatgtattat ttttttctat ttattgtaat ctgtttttga atgttttcca aaatcattgc 4681 aaaactttgt ataaaagcca taacaactaa ggtcactata agttaaaatc acgctattca 4741 gctaatgaaa actacgcgtt aattatacct ttagtttgta taccgtgcat aaaaatatac 4801 ctatattttt ttttgttaat tgtaaacgaa taaaataatt tgtagacgca aattcttatt 4861 atcgaaataa agcaaatt