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LOCUS XM_070218930 4960 bp mRNA linear INV 09-DEC-2024 (LOC108068075), transcript variant X5, mRNA. ACCESSION XM_070218930 VERSION XM_070218930.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4960 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4960 /gene="LOC108068075" /note="uncharacterized LOC108068075; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068075" CDS 345..3956 /gene="LOC108068075" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_070075031.1" /db_xref="GeneID:108068075" /translation="MASLTLHLIVIALLASTALSKAATPTPTTTTPTTSTTTTTVTRQ RGRGVAFQGEGLRLGGVASVSASTTSTEAPTLRAPRQRRPPTTKSIDITVTVTPIRSR GRSGSAATPLPPVSTTTTAAARLLQRRRSSTSSTTTTTGATPAAGRSSRDRGSVRGPR QPRDTPDSSIRRSWQSAQAPTATPYHAQTPTFSSSGSSSSTSSGGTTSSRGALKTPRM IQRLVAGHIHNAQGHSTYEVSAVSANSSSSSYNPSTSASWSSTSTSSSTSSTSSTTTT TRQPPLKSKASSSYRLAKPSIRPRLSSTVAPSRFSNPPSTSRSTTPLPPTSSNTPNPF KDDDNDDEALLNEPDDFDDNWDNGILRLSAGSGKEAEAPAKKAPGGAKEDQKKTLADQ VRDGKYGLIERELFRRVPKRPGVLSYARNSEVPLDNERNYGGLNEEDIWLAEDHLLVI KGGSLNEETDDNQPGGGGLPWPAIDDYDAPGRQIKLPANPAVPPPFPVQLEPHGPLQL IRDNQLEILRPAAGNATLSGMVNHQSDQGAGAGEDLASHPVARTGATAAATSAKSKEA KESPSYVYPAPYAPWLLYPANETTSKGGLLRSPPLLGPWLINGLNGLNASLVSGGDSQ TNLSDFDEDDPSLYYPPAYTFVYKSNYSNPVPPGPLVPGIVLPPPPDHFSRLEGSSTR KPPTSTTSTSSTTSSTTTTTTTTSTTRPPLPIRTSYKPKYNGITYLPPHPRQKQYVER VPVPVAVPIPIYPVNYTPRPQLVFVPSSTEEPGSGSGSRDPPLSKSNPIYYEYFEAKR QPGSIKSNVIDDFLATKPPKRHHHGQSNQIYGHHHHQREHLQHYKASPSPANDVATAA EVVNITPKPRTAQLQLHAEYEASLGQLLRSNLISPQEAGGGVAVGAHPGRFQAPDFDK QPFLPMVNYSADEQDQNAFKAIVYQPNPNPSLNPNPVQRQRHLRVGKQQLQLEPSNLE ASPPQDSYLPGRHFRVGKQQHQQQQQQIYEPQVYSTPIPQFVDDPQQLRPPSPVQSNP LQFWQRPPPQFKRVRPSSKQGHPHVHPHYPPYYVPGYPSAPAGEPLYRLVPVAQHKHW RNKQTQQQQVQSQPIQVQAQHHNQNHNQGYPDRSVNIGHSLAGDILVNYNTNNQFNPQ AELVPQAQLAAPPPPPPPLSYQAQSGQPLWSERERREGDRERDRDRERSVRQSREQQ" misc_feature 522..>917 /gene="LOC108068075" /note="BDLF3; Provisional; Region: PHA03255" /db_xref="CDD:165513" ORIGIN 1 ccgccttggc tccccgactt ccagcgatca gtcgcaattc aaagtgcgcg ctgtgcggag 61 ccatttaaat cgctcaaccg ttttccccca cggttccagg cggttctttt cgaaaccaac 121 tgaaaccgaa aacataacaa atggcccatt cggaagttat cattaaatat atcgagtaac 181 acacgactaa cgatactggg catgcgcact gcctttaaat gtgattttta tcagcgataa 241 agctgtgatt ttttttgggt ttacttcgcc gatcgatcga taatgataaa agggaaaaaa 301 caaggtgcat ccagttagtg aaacaagcca taaattagca aaagatggca tcgttaacct 361 tgcacttgat agtgatagct ctgctggcgt cgactgcgct gtcaaaggcg gcgacaccaa 421 caccaacaac aaccacacca acaacatcta caacaacaac aacagtgacg cgacagcgcg 481 gcagaggcgt cgccttccag ggggaggggc tgcggctggg gggcgtggca tctgtatctg 541 catccacaac cagcacagag gcgccaacgt tgcgggcacc gcgtcagcgt cgtccgccca 601 cgacgaaatc gatcgatata acggtgacgg tgaccccgat tcgcagtcgc ggtcgcagtg 661 gcagcgcagc gacgcctctg ccgccggtca gcacaacaac aactgctgct gctaggctgc 721 tgcagcgacg tcgcagcagc acttccagta caacaacaac aacaggagca actccagcag 781 ctggaagatc ttccagggat cgtggaagtg tgagggggcc acgacaaccg cgcgatacgc 841 ccgattcgag cattcgacgg agttggcagt ccgcccaagc gcccaccgcc accccctacc 901 acgcccaaac acccactttc agttccagtg gcagttccag ttccacttcc agtggcggta 961 ccacttccag tcgaggcgca ctgaaaacgc cgcgaatgat ccagcgcctg gtggccggtc 1021 acatccacaa tgcccaggga cactccacct acgaggtgtc ggcggtcagt gccaacagct 1081 cctcgtctag ttataatcct tcgacgagtg ccagttggag ttccacttcc acttccagtt 1141 ccacttcctc cacttcctcc acgacgacga cgacgaggca gccgcctttg aagagcaagg 1201 cgagcagcag ctaccgactg gccaaaccct cgatcaggcc gagattgagc agcacagtgg 1261 cccccagtcg cttcagtaat ccgcccagta cctcgagatc caccactccc ctgccgccga 1321 cgagttccaa taccccgaat ccttttaagg acgacgacaa cgatgatgag gcgctgctga 1381 acgaaccgga tgacttcgac gacaactggg acaatgggat cctgcggctg agcgccggtt 1441 cgggcaagga ggcggaggcg ccggccaaga aggccccagg aggagccaag gaggaccaga 1501 agaagacgct ggccgaccag gtgagggacg gcaagtatgg actgatcgaa agggagctct 1561 tccgtcgcgt tcccaagcgt ccgggagtgc tgagctatgc ccgcaactcg gaggttccgc 1621 tggacaatga gcgcaactat ggaggcctca acgaggagga catctggctg gccgaggatc 1681 acctgctggt gatcaagggt ggctccctca acgaggagac cgatgacaat cagccggggg 1741 gtggtggcct gccctggccg gccatcgatg actacgatgc gccgggaagg cagatcaagt 1801 tgccagccaa tccagctgtg ccgcctccat ttcccgtgca gctcgagccg catgggccgc 1861 tgcagcttat ccgagataat caactcgaga tcctccgtcc ggcggctggc aatgcaacgc 1921 tatccgggat ggtcaaccac cagagcgacc agggcgccgg cgccggcgaa gatctcgcat 1981 cgcatcctgt tgcccggacg ggagcgactg cagcagctac gtcggctaag tccaaggagg 2041 ccaaggaatc cccctcctat gtttatcccg cgccctatgc cccctggctg ctctaccccg 2101 ccaacgagac gacgtccaaa ggcgggttgc tgagatcgcc gccgcttttg ggaccctggc 2161 tgatcaacgg gctgaatggc ttgaatgcct ctctagtttc tggcggggat tcccaaacga 2221 atctgagcga tttcgacgag gacgatccct cactctacta tccaccagcc tacacgtttg 2281 tctacaagtc caactactcg aatccggtgc caccgggtcc cttggtgccc ggcatagtcc 2341 tgccaccgcc gccggatcac ttcagtcgac tggagggcag cagcaccagg aaaccaccca 2401 caagcactac ttctacaagt agtactactt ctagcactac tactactact actactacca 2461 gtaccacacg accaccgctg cccattcgca cctcgtacaa gcccaagtac aatgggatca 2521 cctatctgcc gccgcatccg aggcagaaac agtatgtgga gcgagtgccc gttccggtgg 2581 cagtgcccat acccatttac cccgtcaact atacgccgcg tccccagctg gtctttgtgc 2641 ccagctccac ggaggaaccg ggatcgggtt cgggatctcg agatcccccg ctctccaagt 2701 cgaaccccat ctactacgag tacttcgagg ccaagcggca gccgggctcc atcaagtcca 2761 acgtcatcga cgacttcctg gccaccaagc cgcccaagcg gcatcatcat ggccagagta 2821 accagatata tggccaccat caccatcagc gggagcatct gcagcactac aaggcgtcgc 2881 cgagtccggc aaacgatgtg gccaccgccg ccgaggtggt caacatcacg cccaagccca 2941 ggaccgccca gctgcagctg cacgcggagt acgaggcgtc cctgggccag ctgctcagga 3001 gcaacctcat ctcgccccag gaagcaggag gaggagtggc agtcggagcc catccggggc 3061 gattccaggc ccccgacttt gacaagcagc ccttcctgcc catggtgaac tacagtgcgg 3121 acgagcagga ccagaacgcc ttcaaggcca tcgtttacca gcccaatccc aatcccagtc 3181 tgaatcccaa tcccgtccag cggcagcgtc acctgcgtgt tggcaagcag cagctgcagc 3241 tggagcccag caacttggag gcctctccgc cgcaggactc ctatctgccg ggtcgccact 3301 tccgggtggg caagcagcag caccagcagc agcagcagca gatctacgag ccgcaggtct 3361 acagcacccc aattccccag tttgtggacg atccgcagca actaaggccc ccatctccgg 3421 tccaatcgaa tcctttgcag ttctggcagc gacctccgcc gcagtttaaa agggtgcgac 3481 ccagcagcaa gcagggtcac cctcatgtcc atccccatta tccgccgtac tatgtgcccg 3541 gctatcccag tgctccggcg ggggaacccc tgtaccgcct ggtgcccgtg gcccagcaca 3601 agcactggag gaacaagcag acgcagcagc agcaggtgca atcgcagccc atccaggtgc 3661 aggcccagca tcacaatcag aatcacaacc agggttatcc cgatcggagc gttaatattg 3721 gacacagtct cgccggcgac atcctcgtca actacaacac caacaatcag ttcaatccgc 3781 aggcggaact ggtgccccag gcccagttgg ccgccccccc tccgccgccg ccgccgctgt 3841 cctatcaggc ccaaagtggc cagcccctgt ggtccgaaag ggagaggagg gagggagatc 3901 gggagcggga tcgggatcgg gagcgatcgg tgagacagtc cagggaacag cagtagtact 3961 tatatatctt aaaaatccga gtaatcatgt cgataatgat ggtttctatg tcattgataa 4021 acgtagtgtc aaaatgtgat ctatagggag gccaatccgc aattcttttt cattcaatac 4081 catttcatat cattcacaac caatcccgat tatggtctca ttttcgtatt tgaacatttt 4141 tatttttata acccgaaata ttcctctcga aatcgctgaa aaattgaatt cttcaaaatg 4201 atttctttta ttcgataaaa tcatcatttt aatgggtgtt ttgtgggcgt ttcttctttg 4261 ccgcttccat ttcgactttt atttaagctc ccagtttatt tcgcgttctt tgctaccact 4321 aacaaatagt tacgttacgt agagctggtc atttaagaga taaaccccga tttggtcctg 4381 ctgtgctgcc aacgtctcga tggcgatcga caatcgatac atatcgccaa tcgctgacag 4441 agttgcaaca agcaaataca catacatata tatttatacc atatataagt gtagctatat 4501 ccctatgcgg taataatata tattcacaaa cctatgtaaa taaaaaacga gtgtaggcgc 4561 taccgacacc acttagtcct aggggcagta aaatatgtgc atcaatgtat gtatacttta 4621 tcgataccgt taccgatgtc gatatcgaac gaaggatcct tcgcttagcc gtagctatct 4681 gttttatcct gcacacacac tatatgtatt atttttttct atttattgta atctgttttt 4741 gaatgttttc caaaatcatt gcaaaacttt gtataaaagc cataacaact aaggtcacta 4801 taagttaaaa tcacgctatt cagctaatga aaactacgcg ttaattatac ctttagtttg 4861 tataccgtgc ataaaaatat acctatattt ttttttgtta attgtaaacg aataaaataa 4921 tttgtagacg caaattctta ttatcgaaat aaagcaaatt