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LOCUS XM_070218929 4639 bp mRNA linear INV 09-DEC-2024 (LOC108068075), transcript variant X4, mRNA. ACCESSION XM_070218929 VERSION XM_070218929.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4639 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4639 /gene="LOC108068075" /note="uncharacterized LOC108068075; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068075" CDS 24..3635 /gene="LOC108068075" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_070075030.1" /db_xref="GeneID:108068075" /translation="MASLTLHLIVIALLASTALSKAATPTPTTTTPTTSTTTTTVTRQ RGRGVAFQGEGLRLGGVASVSASTTSTEAPTLRAPRQRRPPTTKSIDITVTVTPIRSR GRSGSAATPLPPVSTTTTAAARLLQRRRSSTSSTTTTTGATPAAGRSSRDRGSVRGPR QPRDTPDSSIRRSWQSAQAPTATPYHAQTPTFSSSGSSSSTSSGGTTSSRGALKTPRM IQRLVAGHIHNAQGHSTYEVSAVSANSSSSSYNPSTSASWSSTSTSSSTSSTSSTTTT TRQPPLKSKASSSYRLAKPSIRPRLSSTVAPSRFSNPPSTSRSTTPLPPTSSNTPNPF KDDDNDDEALLNEPDDFDDNWDNGILRLSAGSGKEAEAPAKKAPGGAKEDQKKTLADQ VRDGKYGLIERELFRRVPKRPGVLSYARNSEVPLDNERNYGGLNEEDIWLAEDHLLVI KGGSLNEETDDNQPGGGGLPWPAIDDYDAPGRQIKLPANPAVPPPFPVQLEPHGPLQL IRDNQLEILRPAAGNATLSGMVNHQSDQGAGAGEDLASHPVARTGATAAATSAKSKEA KESPSYVYPAPYAPWLLYPANETTSKGGLLRSPPLLGPWLINGLNGLNASLVSGGDSQ TNLSDFDEDDPSLYYPPAYTFVYKSNYSNPVPPGPLVPGIVLPPPPDHFSRLEGSSTR KPPTSTTSTSSTTSSTTTTTTTTSTTRPPLPIRTSYKPKYNGITYLPPHPRQKQYVER VPVPVAVPIPIYPVNYTPRPQLVFVPSSTEEPGSGSGSRDPPLSKSNPIYYEYFEAKR QPGSIKSNVIDDFLATKPPKRHHHGQSNQIYGHHHHQREHLQHYKASPSPANDVATAA EVVNITPKPRTAQLQLHAEYEASLGQLLRSNLISPQEAGGGVAVGAHPGRFQAPDFDK QPFLPMVNYSADEQDQNAFKAIVYQPNPNPSLNPNPVQRQRHLRVGKQQLQLEPSNLE ASPPQDSYLPGRHFRVGKQQHQQQQQQIYEPQVYSTPIPQFVDDPQQLRPPSPVQSNP LQFWQRPPPQFKRVRPSSKQGHPHVHPHYPPYYVPGYPSAPAGEPLYRLVPVAQHKHW RNKQTQQQQVQSQPIQVQAQHHNQNHNQGYPDRSVNIGHSLAGDILVNYNTNNQFNPQ AELVPQAQLAAPPPPPPPLSYQAQSGQPLWSERERREGDRERDRDRERSVRQSREQQ" misc_feature 201..>596 /gene="LOC108068075" /note="BDLF3; Provisional; Region: PHA03255" /db_xref="CDD:165513" ORIGIN 1 ttacgaagtg ttgcggaaat aaaatggcat cgttaacctt gcacttgata gtgatagctc 61 tgctggcgtc gactgcgctg tcaaaggcgg cgacaccaac accaacaaca accacaccaa 121 caacatctac aacaacaaca acagtgacgc gacagcgcgg cagaggcgtc gccttccagg 181 gggaggggct gcggctgggg ggcgtggcat ctgtatctgc atccacaacc agcacagagg 241 cgccaacgtt gcgggcaccg cgtcagcgtc gtccgcccac gacgaaatcg atcgatataa 301 cggtgacggt gaccccgatt cgcagtcgcg gtcgcagtgg cagcgcagcg acgcctctgc 361 cgccggtcag cacaacaaca actgctgctg ctaggctgct gcagcgacgt cgcagcagca 421 cttccagtac aacaacaaca acaggagcaa ctccagcagc tggaagatct tccagggatc 481 gtggaagtgt gagggggcca cgacaaccgc gcgatacgcc cgattcgagc attcgacgga 541 gttggcagtc cgcccaagcg cccaccgcca ccccctacca cgcccaaaca cccactttca 601 gttccagtgg cagttccagt tccacttcca gtggcggtac cacttccagt cgaggcgcac 661 tgaaaacgcc gcgaatgatc cagcgcctgg tggccggtca catccacaat gcccagggac 721 actccaccta cgaggtgtcg gcggtcagtg ccaacagctc ctcgtctagt tataatcctt 781 cgacgagtgc cagttggagt tccacttcca cttccagttc cacttcctcc acttcctcca 841 cgacgacgac gacgaggcag ccgcctttga agagcaaggc gagcagcagc taccgactgg 901 ccaaaccctc gatcaggccg agattgagca gcacagtggc ccccagtcgc ttcagtaatc 961 cgcccagtac ctcgagatcc accactcccc tgccgccgac gagttccaat accccgaatc 1021 cttttaagga cgacgacaac gatgatgagg cgctgctgaa cgaaccggat gacttcgacg 1081 acaactggga caatgggatc ctgcggctga gcgccggttc gggcaaggag gcggaggcgc 1141 cggccaagaa ggccccagga ggagccaagg aggaccagaa gaagacgctg gccgaccagg 1201 tgagggacgg caagtatgga ctgatcgaaa gggagctctt ccgtcgcgtt cccaagcgtc 1261 cgggagtgct gagctatgcc cgcaactcgg aggttccgct ggacaatgag cgcaactatg 1321 gaggcctcaa cgaggaggac atctggctgg ccgaggatca cctgctggtg atcaagggtg 1381 gctccctcaa cgaggagacc gatgacaatc agccgggggg tggtggcctg ccctggccgg 1441 ccatcgatga ctacgatgcg ccgggaaggc agatcaagtt gccagccaat ccagctgtgc 1501 cgcctccatt tcccgtgcag ctcgagccgc atgggccgct gcagcttatc cgagataatc 1561 aactcgagat cctccgtccg gcggctggca atgcaacgct atccgggatg gtcaaccacc 1621 agagcgacca gggcgccggc gccggcgaag atctcgcatc gcatcctgtt gcccggacgg 1681 gagcgactgc agcagctacg tcggctaagt ccaaggaggc caaggaatcc ccctcctatg 1741 tttatcccgc gccctatgcc ccctggctgc tctaccccgc caacgagacg acgtccaaag 1801 gcgggttgct gagatcgccg ccgcttttgg gaccctggct gatcaacggg ctgaatggct 1861 tgaatgcctc tctagtttct ggcggggatt cccaaacgaa tctgagcgat ttcgacgagg 1921 acgatccctc actctactat ccaccagcct acacgtttgt ctacaagtcc aactactcga 1981 atccggtgcc accgggtccc ttggtgcccg gcatagtcct gccaccgccg ccggatcact 2041 tcagtcgact ggagggcagc agcaccagga aaccacccac aagcactact tctacaagta 2101 gtactacttc tagcactact actactacta ctactaccag taccacacga ccaccgctgc 2161 ccattcgcac ctcgtacaag cccaagtaca atgggatcac ctatctgccg ccgcatccga 2221 ggcagaaaca gtatgtggag cgagtgcccg ttccggtggc agtgcccata cccatttacc 2281 ccgtcaacta tacgccgcgt ccccagctgg tctttgtgcc cagctccacg gaggaaccgg 2341 gatcgggttc gggatctcga gatcccccgc tctccaagtc gaaccccatc tactacgagt 2401 acttcgaggc caagcggcag ccgggctcca tcaagtccaa cgtcatcgac gacttcctgg 2461 ccaccaagcc gcccaagcgg catcatcatg gccagagtaa ccagatatat ggccaccatc 2521 accatcagcg ggagcatctg cagcactaca aggcgtcgcc gagtccggca aacgatgtgg 2581 ccaccgccgc cgaggtggtc aacatcacgc ccaagcccag gaccgcccag ctgcagctgc 2641 acgcggagta cgaggcgtcc ctgggccagc tgctcaggag caacctcatc tcgccccagg 2701 aagcaggagg aggagtggca gtcggagccc atccggggcg attccaggcc cccgactttg 2761 acaagcagcc cttcctgccc atggtgaact acagtgcgga cgagcaggac cagaacgcct 2821 tcaaggccat cgtttaccag cccaatccca atcccagtct gaatcccaat cccgtccagc 2881 ggcagcgtca cctgcgtgtt ggcaagcagc agctgcagct ggagcccagc aacttggagg 2941 cctctccgcc gcaggactcc tatctgccgg gtcgccactt ccgggtgggc aagcagcagc 3001 accagcagca gcagcagcag atctacgagc cgcaggtcta cagcacccca attccccagt 3061 ttgtggacga tccgcagcaa ctaaggcccc catctccggt ccaatcgaat cctttgcagt 3121 tctggcagcg acctccgccg cagtttaaaa gggtgcgacc cagcagcaag cagggtcacc 3181 ctcatgtcca tccccattat ccgccgtact atgtgcccgg ctatcccagt gctccggcgg 3241 gggaacccct gtaccgcctg gtgcccgtgg cccagcacaa gcactggagg aacaagcaga 3301 cgcagcagca gcaggtgcaa tcgcagccca tccaggtgca ggcccagcat cacaatcaga 3361 atcacaacca gggttatccc gatcggagcg ttaatattgg acacagtctc gccggcgaca 3421 tcctcgtcaa ctacaacacc aacaatcagt tcaatccgca ggcggaactg gtgccccagg 3481 cccagttggc cgccccccct ccgccgccgc cgccgctgtc ctatcaggcc caaagtggcc 3541 agcccctgtg gtccgaaagg gagaggaggg agggagatcg ggagcgggat cgggatcggg 3601 agcgatcggt gagacagtcc agggaacagc agtagtactt atatatctta aaaatccgag 3661 taatcatgtc gataatgatg gtttctatgt cattgataaa cgtagtgtca aaatgtgatc 3721 tatagggagg ccaatccgca attctttttc attcaatacc atttcatatc attcacaacc 3781 aatcccgatt atggtctcat tttcgtattt gaacattttt atttttataa cccgaaatat 3841 tcctctcgaa atcgctgaaa aattgaattc ttcaaaatga tttcttttat tcgataaaat 3901 catcatttta atgggtgttt tgtgggcgtt tcttctttgc cgcttccatt tcgactttta 3961 tttaagctcc cagtttattt cgcgttcttt gctaccacta acaaatagtt acgttacgta 4021 gagctggtca tttaagagat aaaccccgat ttggtcctgc tgtgctgcca acgtctcgat 4081 ggcgatcgac aatcgataca tatcgccaat cgctgacaga gttgcaacaa gcaaatacac 4141 atacatatat atttatacca tatataagtg tagctatatc cctatgcggt aataatatat 4201 attcacaaac ctatgtaaat aaaaaacgag tgtaggcgct accgacacca cttagtccta 4261 ggggcagtaa aatatgtgca tcaatgtatg tatactttat cgataccgtt accgatgtcg 4321 atatcgaacg aaggatcctt cgcttagccg tagctatctg ttttatcctg cacacacact 4381 atatgtatta tttttttcta tttattgtaa tctgtttttg aatgttttcc aaaatcattg 4441 caaaactttg tataaaagcc ataacaacta aggtcactat aagttaaaat cacgctattc 4501 agctaatgaa aactacgcgt taattatacc tttagtttgt ataccgtgca taaaaatata 4561 cctatatttt tttttgttaa ttgtaaacga ataaaataat ttgtagacgc aaattcttat 4621 tatcgaaata aagcaaatt