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LOCUS XM_070218928 5518 bp mRNA linear INV 09-DEC-2024 (LOC108068075), transcript variant X3, mRNA. ACCESSION XM_070218928 VERSION XM_070218928.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5518 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5518 /gene="LOC108068075" /note="uncharacterized LOC108068075; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068075" CDS 903..4514 /gene="LOC108068075" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_070075029.1" /db_xref="GeneID:108068075" /translation="MASLTLHLIVIALLASTALSKAATPTPTTTTPTTSTTTTTVTRQ RGRGVAFQGEGLRLGGVASVSASTTSTEAPTLRAPRQRRPPTTKSIDITVTVTPIRSR GRSGSAATPLPPVSTTTTAAARLLQRRRSSTSSTTTTTGATPAAGRSSRDRGSVRGPR QPRDTPDSSIRRSWQSAQAPTATPYHAQTPTFSSSGSSSSTSSGGTTSSRGALKTPRM IQRLVAGHIHNAQGHSTYEVSAVSANSSSSSYNPSTSASWSSTSTSSSTSSTSSTTTT TRQPPLKSKASSSYRLAKPSIRPRLSSTVAPSRFSNPPSTSRSTTPLPPTSSNTPNPF KDDDNDDEALLNEPDDFDDNWDNGILRLSAGSGKEAEAPAKKAPGGAKEDQKKTLADQ VRDGKYGLIERELFRRVPKRPGVLSYARNSEVPLDNERNYGGLNEEDIWLAEDHLLVI KGGSLNEETDDNQPGGGGLPWPAIDDYDAPGRQIKLPANPAVPPPFPVQLEPHGPLQL IRDNQLEILRPAAGNATLSGMVNHQSDQGAGAGEDLASHPVARTGATAAATSAKSKEA KESPSYVYPAPYAPWLLYPANETTSKGGLLRSPPLLGPWLINGLNGLNASLVSGGDSQ TNLSDFDEDDPSLYYPPAYTFVYKSNYSNPVPPGPLVPGIVLPPPPDHFSRLEGSSTR KPPTSTTSTSSTTSSTTTTTTTTSTTRPPLPIRTSYKPKYNGITYLPPHPRQKQYVER VPVPVAVPIPIYPVNYTPRPQLVFVPSSTEEPGSGSGSRDPPLSKSNPIYYEYFEAKR QPGSIKSNVIDDFLATKPPKRHHHGQSNQIYGHHHHQREHLQHYKASPSPANDVATAA EVVNITPKPRTAQLQLHAEYEASLGQLLRSNLISPQEAGGGVAVGAHPGRFQAPDFDK QPFLPMVNYSADEQDQNAFKAIVYQPNPNPSLNPNPVQRQRHLRVGKQQLQLEPSNLE ASPPQDSYLPGRHFRVGKQQHQQQQQQIYEPQVYSTPIPQFVDDPQQLRPPSPVQSNP LQFWQRPPPQFKRVRPSSKQGHPHVHPHYPPYYVPGYPSAPAGEPLYRLVPVAQHKHW RNKQTQQQQVQSQPIQVQAQHHNQNHNQGYPDRSVNIGHSLAGDILVNYNTNNQFNPQ AELVPQAQLAAPPPPPPPLSYQAQSGQPLWSERERREGDRERDRDRERSVRQSREQQ" misc_feature 1080..>1475 /gene="LOC108068075" /note="BDLF3; Provisional; Region: PHA03255" /db_xref="CDD:165513" ORIGIN 1 tcctcttctc gcttttagcc tggccaaaac gggcaggaga atcgttcaaa aacctggcgg 61 gtgtgaagtg aagtgactta tgaattgatc aaatttatca cgggtaaatc acatattttt 121 gccaacagat ttttcgctaa tgaacggaga attactcacc taattcgccc aatttttttt 181 ttgctccttt ttgtttttgt gaatttggta aaacaaaaat atatgtatag tatattagca 241 gtgaattatt aaatatacac aatacaacag cagcggcaac aaataatcat aataaaacaa 301 agcaaagcga aagaaacaaa aatttctaat atgcaaatta aataattttg tttatggtgc 361 agtcgaaaga atcccagcaa caacagcagc aaaaagtgca aaaaaatata tacgaaaata 421 atattatttg aaaatcgaac ctgttctctg atggaggctg gatccggcga ttgagttcgt 481 tgattgacgg tcagaacgcc gcgtcatgtt gttgctgcca acggaaatat gtccagcagc 541 aacagcaaca ataacaacag caacagcagc agcaacaaca accataaaca acaccaaaag 601 ttgcccaacg aaaagtaatt tgcgaaaatc ataaaaaagt agcgtaaata actcccggct 661 ctacgagatc caagtggagc aaaactcaaa actcaaaacg caaagagcga aaagcacaaa 721 ggccaagcgc aaaaatagcc agaaaattgc tggaaatctt ttggttcaca ccaaaacaag 781 aaaccccaga aataagaaca atattcaaga acaaccagag caacaacagc aaaacagcaa 841 acagcaagtg tcgccgtttt cttaggcaca aaaaccattc tgtgatatct caagacccaa 901 agatggcatc gttaaccttg cacttgatag tgatagctct gctggcgtcg actgcgctgt 961 caaaggcggc gacaccaaca ccaacaacaa ccacaccaac aacatctaca acaacaacaa 1021 cagtgacgcg acagcgcggc agaggcgtcg ccttccaggg ggaggggctg cggctggggg 1081 gcgtggcatc tgtatctgca tccacaacca gcacagaggc gccaacgttg cgggcaccgc 1141 gtcagcgtcg tccgcccacg acgaaatcga tcgatataac ggtgacggtg accccgattc 1201 gcagtcgcgg tcgcagtggc agcgcagcga cgcctctgcc gccggtcagc acaacaacaa 1261 ctgctgctgc taggctgctg cagcgacgtc gcagcagcac ttccagtaca acaacaacaa 1321 caggagcaac tccagcagct ggaagatctt ccagggatcg tggaagtgtg agggggccac 1381 gacaaccgcg cgatacgccc gattcgagca ttcgacggag ttggcagtcc gcccaagcgc 1441 ccaccgccac cccctaccac gcccaaacac ccactttcag ttccagtggc agttccagtt 1501 ccacttccag tggcggtacc acttccagtc gaggcgcact gaaaacgccg cgaatgatcc 1561 agcgcctggt ggccggtcac atccacaatg cccagggaca ctccacctac gaggtgtcgg 1621 cggtcagtgc caacagctcc tcgtctagtt ataatccttc gacgagtgcc agttggagtt 1681 ccacttccac ttccagttcc acttcctcca cttcctccac gacgacgacg acgaggcagc 1741 cgcctttgaa gagcaaggcg agcagcagct accgactggc caaaccctcg atcaggccga 1801 gattgagcag cacagtggcc cccagtcgct tcagtaatcc gcccagtacc tcgagatcca 1861 ccactcccct gccgccgacg agttccaata ccccgaatcc ttttaaggac gacgacaacg 1921 atgatgaggc gctgctgaac gaaccggatg acttcgacga caactgggac aatgggatcc 1981 tgcggctgag cgccggttcg ggcaaggagg cggaggcgcc ggccaagaag gccccaggag 2041 gagccaagga ggaccagaag aagacgctgg ccgaccaggt gagggacggc aagtatggac 2101 tgatcgaaag ggagctcttc cgtcgcgttc ccaagcgtcc gggagtgctg agctatgccc 2161 gcaactcgga ggttccgctg gacaatgagc gcaactatgg aggcctcaac gaggaggaca 2221 tctggctggc cgaggatcac ctgctggtga tcaagggtgg ctccctcaac gaggagaccg 2281 atgacaatca gccggggggt ggtggcctgc cctggccggc catcgatgac tacgatgcgc 2341 cgggaaggca gatcaagttg ccagccaatc cagctgtgcc gcctccattt cccgtgcagc 2401 tcgagccgca tgggccgctg cagcttatcc gagataatca actcgagatc ctccgtccgg 2461 cggctggcaa tgcaacgcta tccgggatgg tcaaccacca gagcgaccag ggcgccggcg 2521 ccggcgaaga tctcgcatcg catcctgttg cccggacggg agcgactgca gcagctacgt 2581 cggctaagtc caaggaggcc aaggaatccc cctcctatgt ttatcccgcg ccctatgccc 2641 cctggctgct ctaccccgcc aacgagacga cgtccaaagg cgggttgctg agatcgccgc 2701 cgcttttggg accctggctg atcaacgggc tgaatggctt gaatgcctct ctagtttctg 2761 gcggggattc ccaaacgaat ctgagcgatt tcgacgagga cgatccctca ctctactatc 2821 caccagccta cacgtttgtc tacaagtcca actactcgaa tccggtgcca ccgggtccct 2881 tggtgcccgg catagtcctg ccaccgccgc cggatcactt cagtcgactg gagggcagca 2941 gcaccaggaa accacccaca agcactactt ctacaagtag tactacttct agcactacta 3001 ctactactac tactaccagt accacacgac caccgctgcc cattcgcacc tcgtacaagc 3061 ccaagtacaa tgggatcacc tatctgccgc cgcatccgag gcagaaacag tatgtggagc 3121 gagtgcccgt tccggtggca gtgcccatac ccatttaccc cgtcaactat acgccgcgtc 3181 cccagctggt ctttgtgccc agctccacgg aggaaccggg atcgggttcg ggatctcgag 3241 atcccccgct ctccaagtcg aaccccatct actacgagta cttcgaggcc aagcggcagc 3301 cgggctccat caagtccaac gtcatcgacg acttcctggc caccaagccg cccaagcggc 3361 atcatcatgg ccagagtaac cagatatatg gccaccatca ccatcagcgg gagcatctgc 3421 agcactacaa ggcgtcgccg agtccggcaa acgatgtggc caccgccgcc gaggtggtca 3481 acatcacgcc caagcccagg accgcccagc tgcagctgca cgcggagtac gaggcgtccc 3541 tgggccagct gctcaggagc aacctcatct cgccccagga agcaggagga ggagtggcag 3601 tcggagccca tccggggcga ttccaggccc ccgactttga caagcagccc ttcctgccca 3661 tggtgaacta cagtgcggac gagcaggacc agaacgcctt caaggccatc gtttaccagc 3721 ccaatcccaa tcccagtctg aatcccaatc ccgtccagcg gcagcgtcac ctgcgtgttg 3781 gcaagcagca gctgcagctg gagcccagca acttggaggc ctctccgccg caggactcct 3841 atctgccggg tcgccacttc cgggtgggca agcagcagca ccagcagcag cagcagcaga 3901 tctacgagcc gcaggtctac agcaccccaa ttccccagtt tgtggacgat ccgcagcaac 3961 taaggccccc atctccggtc caatcgaatc ctttgcagtt ctggcagcga cctccgccgc 4021 agtttaaaag ggtgcgaccc agcagcaagc agggtcaccc tcatgtccat ccccattatc 4081 cgccgtacta tgtgcccggc tatcccagtg ctccggcggg ggaacccctg taccgcctgg 4141 tgcccgtggc ccagcacaag cactggagga acaagcagac gcagcagcag caggtgcaat 4201 cgcagcccat ccaggtgcag gcccagcatc acaatcagaa tcacaaccag ggttatcccg 4261 atcggagcgt taatattgga cacagtctcg ccggcgacat cctcgtcaac tacaacacca 4321 acaatcagtt caatccgcag gcggaactgg tgccccaggc ccagttggcc gccccccctc 4381 cgccgccgcc gccgctgtcc tatcaggccc aaagtggcca gcccctgtgg tccgaaaggg 4441 agaggaggga gggagatcgg gagcgggatc gggatcggga gcgatcggtg agacagtcca 4501 gggaacagca gtagtactta tatatcttaa aaatccgagt aatcatgtcg ataatgatgg 4561 tttctatgtc attgataaac gtagtgtcaa aatgtgatct atagggaggc caatccgcaa 4621 ttctttttca ttcaatacca tttcatatca ttcacaacca atcccgatta tggtctcatt 4681 ttcgtatttg aacattttta tttttataac ccgaaatatt cctctcgaaa tcgctgaaaa 4741 attgaattct tcaaaatgat ttcttttatt cgataaaatc atcattttaa tgggtgtttt 4801 gtgggcgttt cttctttgcc gcttccattt cgacttttat ttaagctccc agtttatttc 4861 gcgttctttg ctaccactaa caaatagtta cgttacgtag agctggtcat ttaagagata 4921 aaccccgatt tggtcctgct gtgctgccaa cgtctcgatg gcgatcgaca atcgatacat 4981 atcgccaatc gctgacagag ttgcaacaag caaatacaca tacatatata tttataccat 5041 atataagtgt agctatatcc ctatgcggta ataatatata ttcacaaacc tatgtaaata 5101 aaaaacgagt gtaggcgcta ccgacaccac ttagtcctag gggcagtaaa atatgtgcat 5161 caatgtatgt atactttatc gataccgtta ccgatgtcga tatcgaacga aggatccttc 5221 gcttagccgt agctatctgt tttatcctgc acacacacta tatgtattat ttttttctat 5281 ttattgtaat ctgtttttga atgttttcca aaatcattgc aaaactttgt ataaaagcca 5341 taacaactaa ggtcactata agttaaaatc acgctattca gctaatgaaa actacgcgtt 5401 aattatacct ttagtttgta taccgtgcat aaaaatatac ctatattttt ttttgttaat 5461 tgtaaacgaa taaaataatt tgtagacgca aattcttatt atcgaaataa agcaaatt