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LOCUS XM_070218927 5462 bp mRNA linear INV 09-DEC-2024 (LOC108068075), transcript variant X1, mRNA. ACCESSION XM_070218927 VERSION XM_070218927.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5462 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5462 /gene="LOC108068075" /note="uncharacterized LOC108068075; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068075" CDS 847..4458 /gene="LOC108068075" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_070075028.1" /db_xref="GeneID:108068075" /translation="MASLTLHLIVIALLASTALSKAATPTPTTTTPTTSTTTTTVTRQ RGRGVAFQGEGLRLGGVASVSASTTSTEAPTLRAPRQRRPPTTKSIDITVTVTPIRSR GRSGSAATPLPPVSTTTTAAARLLQRRRSSTSSTTTTTGATPAAGRSSRDRGSVRGPR QPRDTPDSSIRRSWQSAQAPTATPYHAQTPTFSSSGSSSSTSSGGTTSSRGALKTPRM IQRLVAGHIHNAQGHSTYEVSAVSANSSSSSYNPSTSASWSSTSTSSSTSSTSSTTTT TRQPPLKSKASSSYRLAKPSIRPRLSSTVAPSRFSNPPSTSRSTTPLPPTSSNTPNPF KDDDNDDEALLNEPDDFDDNWDNGILRLSAGSGKEAEAPAKKAPGGAKEDQKKTLADQ VRDGKYGLIERELFRRVPKRPGVLSYARNSEVPLDNERNYGGLNEEDIWLAEDHLLVI KGGSLNEETDDNQPGGGGLPWPAIDDYDAPGRQIKLPANPAVPPPFPVQLEPHGPLQL IRDNQLEILRPAAGNATLSGMVNHQSDQGAGAGEDLASHPVARTGATAAATSAKSKEA KESPSYVYPAPYAPWLLYPANETTSKGGLLRSPPLLGPWLINGLNGLNASLVSGGDSQ TNLSDFDEDDPSLYYPPAYTFVYKSNYSNPVPPGPLVPGIVLPPPPDHFSRLEGSSTR KPPTSTTSTSSTTSSTTTTTTTTSTTRPPLPIRTSYKPKYNGITYLPPHPRQKQYVER VPVPVAVPIPIYPVNYTPRPQLVFVPSSTEEPGSGSGSRDPPLSKSNPIYYEYFEAKR QPGSIKSNVIDDFLATKPPKRHHHGQSNQIYGHHHHQREHLQHYKASPSPANDVATAA EVVNITPKPRTAQLQLHAEYEASLGQLLRSNLISPQEAGGGVAVGAHPGRFQAPDFDK QPFLPMVNYSADEQDQNAFKAIVYQPNPNPSLNPNPVQRQRHLRVGKQQLQLEPSNLE ASPPQDSYLPGRHFRVGKQQHQQQQQQIYEPQVYSTPIPQFVDDPQQLRPPSPVQSNP LQFWQRPPPQFKRVRPSSKQGHPHVHPHYPPYYVPGYPSAPAGEPLYRLVPVAQHKHW RNKQTQQQQVQSQPIQVQAQHHNQNHNQGYPDRSVNIGHSLAGDILVNYNTNNQFNPQ AELVPQAQLAAPPPPPPPLSYQAQSGQPLWSERERREGDRERDRDRERSVRQSREQQ" misc_feature 1024..>1419 /gene="LOC108068075" /note="BDLF3; Provisional; Region: PHA03255" /db_xref="CDD:165513" ORIGIN 1 ttggctcccc gacttccagc gatcagtcgc aattcaaagt gcgcgctgtg cggagccatt 61 taaatcgctc aaccgttttc ccccacggtt ccaggcggtt cttttcgaaa ccaactgaaa 121 ccgaaaacat aacaaatggc ccattcggaa gttatcatta aatatatcga gtaacacacg 181 actaacgata ctgggcatgc gcactgcctt taaatgtgat ttttatcagc gataaagctg 241 tgattttttt tgggtttact tcgccgatcg atcgataatg ataaaaggga aaaaacaagg 301 tgcatccagt tagtgaaaca agccataaat tagcaaaaga aacatccatc aactttccgg 361 acttcgttat atatatattt tatcggcatg agtgttaacc aattatgaag agcatttaat 421 tcgttgattg acggtcagaa cgccgcgtca tgttgttgct gccaacggaa atatgtccag 481 cagcaacagc aacaataaca acagcaacag cagcagcaac aacaaccata aacaacacca 541 aaagttgccc aacgaaaagt aatttgcgaa aatcataaaa aagtagcgta aataactccc 601 ggctctacga gatccaagtg gagcaaaact caaaactcaa aacgcaaaga gcgaaaagca 661 caaaggccaa gcgcaaaaat agccagaaaa ttgctggaaa tcttttggtt cacaccaaaa 721 caagaaaccc cagaaataag aacaatattc aagaacaacc agagcaacaa cagcaaaaca 781 gcaaacagca agtgtcgccg ttttcttagg cacaaaaacc attctgtgat atctcaagac 841 ccaaagatgg catcgttaac cttgcacttg atagtgatag ctctgctggc gtcgactgcg 901 ctgtcaaagg cggcgacacc aacaccaaca acaaccacac caacaacatc tacaacaaca 961 acaacagtga cgcgacagcg cggcagaggc gtcgccttcc agggggaggg gctgcggctg 1021 gggggcgtgg catctgtatc tgcatccaca accagcacag aggcgccaac gttgcgggca 1081 ccgcgtcagc gtcgtccgcc cacgacgaaa tcgatcgata taacggtgac ggtgaccccg 1141 attcgcagtc gcggtcgcag tggcagcgca gcgacgcctc tgccgccggt cagcacaaca 1201 acaactgctg ctgctaggct gctgcagcga cgtcgcagca gcacttccag tacaacaaca 1261 acaacaggag caactccagc agctggaaga tcttccaggg atcgtggaag tgtgaggggg 1321 ccacgacaac cgcgcgatac gcccgattcg agcattcgac ggagttggca gtccgcccaa 1381 gcgcccaccg ccacccccta ccacgcccaa acacccactt tcagttccag tggcagttcc 1441 agttccactt ccagtggcgg taccacttcc agtcgaggcg cactgaaaac gccgcgaatg 1501 atccagcgcc tggtggccgg tcacatccac aatgcccagg gacactccac ctacgaggtg 1561 tcggcggtca gtgccaacag ctcctcgtct agttataatc cttcgacgag tgccagttgg 1621 agttccactt ccacttccag ttccacttcc tccacttcct ccacgacgac gacgacgagg 1681 cagccgcctt tgaagagcaa ggcgagcagc agctaccgac tggccaaacc ctcgatcagg 1741 ccgagattga gcagcacagt ggcccccagt cgcttcagta atccgcccag tacctcgaga 1801 tccaccactc ccctgccgcc gacgagttcc aataccccga atccttttaa ggacgacgac 1861 aacgatgatg aggcgctgct gaacgaaccg gatgacttcg acgacaactg ggacaatggg 1921 atcctgcggc tgagcgccgg ttcgggcaag gaggcggagg cgccggccaa gaaggcccca 1981 ggaggagcca aggaggacca gaagaagacg ctggccgacc aggtgaggga cggcaagtat 2041 ggactgatcg aaagggagct cttccgtcgc gttcccaagc gtccgggagt gctgagctat 2101 gcccgcaact cggaggttcc gctggacaat gagcgcaact atggaggcct caacgaggag 2161 gacatctggc tggccgagga tcacctgctg gtgatcaagg gtggctccct caacgaggag 2221 accgatgaca atcagccggg gggtggtggc ctgccctggc cggccatcga tgactacgat 2281 gcgccgggaa ggcagatcaa gttgccagcc aatccagctg tgccgcctcc atttcccgtg 2341 cagctcgagc cgcatgggcc gctgcagctt atccgagata atcaactcga gatcctccgt 2401 ccggcggctg gcaatgcaac gctatccggg atggtcaacc accagagcga ccagggcgcc 2461 ggcgccggcg aagatctcgc atcgcatcct gttgcccgga cgggagcgac tgcagcagct 2521 acgtcggcta agtccaagga ggccaaggaa tccccctcct atgtttatcc cgcgccctat 2581 gccccctggc tgctctaccc cgccaacgag acgacgtcca aaggcgggtt gctgagatcg 2641 ccgccgcttt tgggaccctg gctgatcaac gggctgaatg gcttgaatgc ctctctagtt 2701 tctggcgggg attcccaaac gaatctgagc gatttcgacg aggacgatcc ctcactctac 2761 tatccaccag cctacacgtt tgtctacaag tccaactact cgaatccggt gccaccgggt 2821 cccttggtgc ccggcatagt cctgccaccg ccgccggatc acttcagtcg actggagggc 2881 agcagcacca ggaaaccacc cacaagcact acttctacaa gtagtactac ttctagcact 2941 actactacta ctactactac cagtaccaca cgaccaccgc tgcccattcg cacctcgtac 3001 aagcccaagt acaatgggat cacctatctg ccgccgcatc cgaggcagaa acagtatgtg 3061 gagcgagtgc ccgttccggt ggcagtgccc atacccattt accccgtcaa ctatacgccg 3121 cgtccccagc tggtctttgt gcccagctcc acggaggaac cgggatcggg ttcgggatct 3181 cgagatcccc cgctctccaa gtcgaacccc atctactacg agtacttcga ggccaagcgg 3241 cagccgggct ccatcaagtc caacgtcatc gacgacttcc tggccaccaa gccgcccaag 3301 cggcatcatc atggccagag taaccagata tatggccacc atcaccatca gcgggagcat 3361 ctgcagcact acaaggcgtc gccgagtccg gcaaacgatg tggccaccgc cgccgaggtg 3421 gtcaacatca cgcccaagcc caggaccgcc cagctgcagc tgcacgcgga gtacgaggcg 3481 tccctgggcc agctgctcag gagcaacctc atctcgcccc aggaagcagg aggaggagtg 3541 gcagtcggag cccatccggg gcgattccag gcccccgact ttgacaagca gcccttcctg 3601 cccatggtga actacagtgc ggacgagcag gaccagaacg ccttcaaggc catcgtttac 3661 cagcccaatc ccaatcccag tctgaatccc aatcccgtcc agcggcagcg tcacctgcgt 3721 gttggcaagc agcagctgca gctggagccc agcaacttgg aggcctctcc gccgcaggac 3781 tcctatctgc cgggtcgcca cttccgggtg ggcaagcagc agcaccagca gcagcagcag 3841 cagatctacg agccgcaggt ctacagcacc ccaattcccc agtttgtgga cgatccgcag 3901 caactaaggc ccccatctcc ggtccaatcg aatcctttgc agttctggca gcgacctccg 3961 ccgcagttta aaagggtgcg acccagcagc aagcagggtc accctcatgt ccatccccat 4021 tatccgccgt actatgtgcc cggctatccc agtgctccgg cgggggaacc cctgtaccgc 4081 ctggtgcccg tggcccagca caagcactgg aggaacaagc agacgcagca gcagcaggtg 4141 caatcgcagc ccatccaggt gcaggcccag catcacaatc agaatcacaa ccagggttat 4201 cccgatcgga gcgttaatat tggacacagt ctcgccggcg acatcctcgt caactacaac 4261 accaacaatc agttcaatcc gcaggcggaa ctggtgcccc aggcccagtt ggccgccccc 4321 cctccgccgc cgccgccgct gtcctatcag gcccaaagtg gccagcccct gtggtccgaa 4381 agggagagga gggagggaga tcgggagcgg gatcgggatc gggagcgatc ggtgagacag 4441 tccagggaac agcagtagta cttatatatc ttaaaaatcc gagtaatcat gtcgataatg 4501 atggtttcta tgtcattgat aaacgtagtg tcaaaatgtg atctataggg aggccaatcc 4561 gcaattcttt ttcattcaat accatttcat atcattcaca accaatcccg attatggtct 4621 cattttcgta tttgaacatt tttattttta taacccgaaa tattcctctc gaaatcgctg 4681 aaaaattgaa ttcttcaaaa tgatttcttt tattcgataa aatcatcatt ttaatgggtg 4741 ttttgtgggc gtttcttctt tgccgcttcc atttcgactt ttatttaagc tcccagttta 4801 tttcgcgttc tttgctacca ctaacaaata gttacgttac gtagagctgg tcatttaaga 4861 gataaacccc gatttggtcc tgctgtgctg ccaacgtctc gatggcgatc gacaatcgat 4921 acatatcgcc aatcgctgac agagttgcaa caagcaaata cacatacata tatatttata 4981 ccatatataa gtgtagctat atccctatgc ggtaataata tatattcaca aacctatgta 5041 aataaaaaac gagtgtaggc gctaccgaca ccacttagtc ctaggggcag taaaatatgt 5101 gcatcaatgt atgtatactt tatcgatacc gttaccgatg tcgatatcga acgaaggatc 5161 cttcgcttag ccgtagctat ctgttttatc ctgcacacac actatatgta ttattttttt 5221 ctatttattg taatctgttt ttgaatgttt tccaaaatca ttgcaaaact ttgtataaaa 5281 gccataacaa ctaaggtcac tataagttaa aatcacgcta ttcagctaat gaaaactacg 5341 cgttaattat acctttagtt tgtataccgt gcataaaaat atacctatat ttttttttgt 5401 taattgtaaa cgaataaaat aatttgtaga cgcaaattct tattatcgaa ataaagcaaa 5461 tt