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LOCUS XM_070218908 3635 bp mRNA linear INV 09-DEC-2024 (LOC108056115), transcript variant X2, mRNA. ACCESSION XM_070218908 VERSION XM_070218908.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3635 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3635 /gene="LOC108056115" /note="uncharacterized LOC108056115; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056115" CDS 202..3168 /gene="LOC108056115" /codon_start=1 /product="uncharacterized protein isoform X2" /protein_id="XP_070075009.1" /db_xref="GeneID:108056115" /translation="MMLLRLTLVAACCLCAAQAVLHGSKDVKRREAGFDTYGPPPRPA PQYGPPPQQHVPHREYGVPQQIPFREYGPPALKYGPPKLNFLGGGGGGGGGGGSSLHE QIKTHFGVPKPFYGPPHIQHKPAPQYGPPPKPAPQYGPPPQQYGPPPPKPAPQYGPPP PQYGPPPVKIQHRPAPQYGPPPQQYGPPPPPPQLLPSPHSAPLFKPAHQPATSYGPPA SGPLNLPPKQIFDAPPPNYGPPPLPVALPGNGGPPQSTTIILTGGHPSGPSGPSGPGP VKQVQIQIDSSGHTHSVSGSQAPFHTACDGWKPIPAPIGAYVEQNHIETQGGYSQVGH GGGSFGTQYSGVGGSASGSASGSGSLIEGLSDEQLVAVALQGGGDGAHVITGPGGGNS IEAEALQAAIGSLDDSYSKPPSDSFAPGSVHAQKYQTIGGHSGGSSGGNYGPPPPPPS GNYGPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPSGNYGPPPSGNFGPPPPPPQF AALTSSHSNSHSSHSQSQSNVNIQYGPPSGNPQPFPQHGAGQPNKPVAYRPPVPAGLL ESIGATVQHLDQFGVKPQQQPATYIPPAANEIPLTGSSIPSLPVPQALYQPPPPPPQS APQVILQQQLPAPQPGPNFIHQQQQPKQQYLPPPPVANVRPLGPPPPQPPTQQYLPAL GPPQSSYFQQQQSQHSENSYSASQFHSQGLPLPQQAPRFNLQQQQVQQQVQQPQPIIV HDCGHGPNLLSSNGYQVQQQQQFQNFGSISAASSGAYNAISQSIPVAEQHTQQLVTGP SDSYGPPPSGNDLDYDHTGYASQKNAVAALPDGTDPQQLPGLDGLDVLSAQKSQSIQL NGQQPQQNFQVQFGGSLNNSPGVASGDANHEEILSQGLLQSILTAIEQPNGQQNLPQN HKAQSRSDEHAKDHDLDQDQDQELANEEDSEQTSSSSNRVEVRVLPEHNENEEETPAE VKEIEPIVVKEEEARH" polyA_site 3635 /gene="LOC108056115" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tggttggttt ttgccagccg aaccgaacca tcgaaccatt gacaaggtaa ctgagcctca 61 cgaaaacagt gccagcggtg cgtatgcgta atatgaaata aagatgctcc gcacgttcac 121 gttcgtgtgc aagtgcataa gtgtgggtaa atagtgtttt agtttggcaa agaaattccc 181 ggagcgttta attactaatc gatgatgctg ctccgcctga ctttggtggc cgcctgctgc 241 ctttgtgccg cccaagcggt gctccacggc tccaaggatg tgaagcgtcg cgaggcgggc 301 ttcgatactt atggtccgcc tcctcgtcct gccccccagt atggtcctcc gccccagcag 361 catgtgcctc atcgggagta cggagtgccg cagcagattc ccttccgcga atacggacct 421 ccggccttga agtacggccc tcccaagctt aactttttgg gtggaggagg aggaggcggt 481 ggaggaggtg gttcctccct gcacgagcag atcaagacgc actttggagt gcccaaaccc 541 ttctacggac cacctcacat ccagcacaag ccggcgcctc aatatggtcc acctcctaag 601 ccagctcctc aatatggtcc accaccacag caatatggtc caccaccacc caagccagct 661 cctcaatatg gtccaccacc cccgcagtat ggtccaccac cagtgaagat ccagcaccgc 721 ccggctcctc agtacggacc accacctcag cagtacggac ctccaccacc accaccacaa 781 ctgctgccct cgccccacag cgccccactc ttcaagcccg cccaccagcc ggccacctcg 841 tacggaccac ccgcctccgg gccactcaac ctgccgccca agcagatctt cgatgccccg 901 ccacccaact acggaccgcc accactgccg gtggctctgc cgggcaacgg gggaccacca 961 cagagcacca cgattatcct gaccggaggt catccaagtg gtcctagtgg acccagtggt 1021 ccgggacccg tgaagcaggt gcagatccag atcgactcct ccgggcacac gcatagtgtg 1081 agcggctccc aggcgccctt ccacacggcc tgcgatggct ggaaaccgat cccggcgccc 1141 atcggtgcct atgtggagca gaaccacatc gagacccagg gcggctacag ccaggtggga 1201 catggcggcg gctcctttgg cacccagtac agcggagtgg gaggaagtgc cagtggaagt 1261 gcaagtggaa gtggctccct gatcgaggga ctctccgatg agcagctggt ggcagtggct 1321 ctgcagggag gcggcgatgg agcccatgtg atcaccggac ccggaggagg caactccatc 1381 gaggcggaag ctcttcaggc cgccattggt tcgttggatg attcgtactc gaagccaccg 1441 tcggattcct ttgctcccgg ttcggttcac gcgcagaagt accagactat cggtggacat 1501 tcgggaggct caagtggagg aaactatgga ccaccaccac cacctcctag tggaaactac 1561 ggacctccac cacccagtgg aaactacgga cctccaccac caccgcccag tggaaactat 1621 ggaccaccac cacctcccag tggaaactac ggacctccgc caagtggcaa ctatggacct 1681 ccgccaagtg gaaactttgg accaccaccg ccacctccgc agtttgccgc cctcaccagc 1741 agccattcga actcgcactc gtcccactcg cagtcgcagt cgaatgtgaa catccagtac 1801 ggtcctccct ccgggaatcc ccagcccttc ccgcagcacg gagccggtca gcccaacaag 1861 ccggtggcct atcgtccacc tgttccagcc ggtcttttag agtccattgg cgccaccgtt 1921 cagcatctgg atcagtttgg agtgaagccc cagcagcagc cagccaccta tattccacca 1981 gcagccaatg agattccgct gacgggttct tccatcccct cgcttcctgt tccccaggct 2041 ctctatcagc cgcctccgcc gccgcctcag tctgcacccc aggtgatcct gcagcagcag 2101 ctgcctgctc ctcagccagg acccaacttc attcaccagc agcagcagcc gaagcagcag 2161 tatctgcctc ctccgccggt ggccaatgtg cgacccctgg gacctccgcc acctcagcca 2221 cccacgcagc agtatttgcc cgccctggga ccacctcagt catcctactt ccagcagcag 2281 cagtcgcagc actcggagaa cagctacagt gcctcgcagt tccactcgca gggtttgccc 2341 ttgcctcagc aggcgccccg cttcaatctg caacagcagc aggtgcaaca gcaggtgcag 2401 caaccccagc ccatcatagt tcacgactgc ggacatggac ccaatctcct gagcagcaat 2461 ggctaccagg tgcaacagca gcagcagttc cagaactttg gcagcatctc ggccgcctcc 2521 tcgggcgcct acaacgccat ctcgcagagc atcccggtgg ccgagcagca cacccagcaa 2581 ctggtcaccg gaccctcgga cagctacgga ccaccgccct ccggaaacga tctggactac 2641 gatcacacgg gctatgcctc gcagaagaac gcggtggccg ccctgcccga tggcaccgat 2701 ccccagcagc tgcccggttt ggatggcctt gatgtgctgt ccgcccaaaa gtcgcagagc 2761 attcagctga atggccagca gccgcagcaa aacttccagg tgcagttcgg cggttcgctg 2821 aacaattcgc cgggcgtcgc ctccggggat gccaatcacg aggagatcct ctcgcagggt 2881 ctgctgcagt ccatcttgac ggccatcgag cagcccaacg gacagcagaa tttgccccag 2941 aaccacaagg cccagagtcg ctccgatgag cacgctaagg atcacgacct cgatcaggat 3001 caggatcagg agctggccaa tgaagaggac agcgagcaga cctccagctc ctccaatcgc 3061 gtcgaggtga gggtgctgcc cgagcataac gagaacgagg aggagacccc cgccgaggtc 3121 aaggagatcg aaccgatcgt ggtcaaggag gaggaggcca ggcattagtc atcagtcact 3181 agttactagt taatgacttt gatgtgacta gttattagct actagttact cgtcactcgt 3241 tactggttac ttgttactaa ttactagtta ctcgtcactt gttactagtt actcgttact 3301 cgttactagc tactagtcac atcaaagtta gcatcatcag cgccgcttga acctatttat 3361 tgctgcctca tcatcatcta agagctggga gtcgtctgtc ccccagttgc cataaagaga 3421 aagtaaaagg ggacaggagg ggattcgaaa aaaatacaca aagagaaaaa agaagctaca 3481 aaacacgcgg agtcgatcgc cgcgtgcaaa aagtgccttt tcatgctcgc agctcgtgta 3541 taaaaattat ttaaaataaa taattaattt attatagcat tgtattgtat tttatgcctt 3601 aaacaaacaa ataaatatgt atgtaaacag aaaaa