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LOCUS XM_070218906 3779 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_070218906 VERSION XM_070218906.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3779 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3779 /gene="btd" /note="buttonhead; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108068018" CDS 1357..3318 /gene="btd" /codon_start=1 /product="transcription factor btd" /protein_id="XP_070075007.1" /db_xref="GeneID:108068018" /translation="MIDAACNYLNLNLNPNPYVQQQQQAAQQQAAQQQQHHLHMQQAQ QQLHLSQQQHQQHMQHLPQQQQMQQQQMQQQQQPQQQPHDFLLSAPSSLSGSSSGSSS GGSPIYNSSGSGSSKAPMKLELPYPQASSTGTASPNSSIQSAPSSASVSPSIFPSPAQ SFASISASPSTPSTAATHLAPPTAATSSSPSSSSSSSSSAASASAAAAAAAAAAAAAD LGAAAVASAAYGWNTAYSGLGPPRSQFPYAQYASDYYGNAVGAMSSSAAWFSHQERLY QPWSSQSYPGFNFDDIAFQTQLQRRSVRCTCPNCTNEMSGLPPIVGPDERGRKQHICH IPGCERLYGKASHLKTHLRWHTGERPFLCLTCGKRFSRSDELQRHGRTHTNYRPYACP ICSKKFSRSDHLSKHKKTHFKDKKSKKALAAEAKEQAAAAIKQEKKEKKAGKQPLVTP VEFKQEQPEVAAPLVNYAPYANLYQQSSGGSANALPPPPPLFQQHHHQQQMASSSSSA AAGYVEQQPWSSRAIQQPAAAVVTTSANSTTSTASSAASSPATAAAAAVAASSPAASA TALAAQHHYAALAMQSESQLAAEYGLTMSGLASGASQDSSSSCHMKSEYAASYPAEFG AGTASYGYPHPHPHHHNAWAAAYHPHATA" misc_feature 2362..2421 /gene="btd" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(2374..2376,2380..2382,2386..2388,2392..2397, 2404..2409,2416..2418,2458..2460,2464..2466,2476..2481, 2488..2493,2500..2502,2542..2544,2548..2550,2554..2556, 2560..2565,2572..2577,2584..2586) /gene="btd" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 2395..2472 /gene="btd" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 2443..2505 /gene="btd" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 2479..2556 /gene="btd" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 2521..2589 /gene="btd" /note="Zinc finger, C2H2 type; Region: zf-C2H2; pfam00096" /db_xref="CDD:395048" misc_feature 2527..2589 /gene="btd" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 tcgacattaa cttttacaat atttcgctca catcactcac atcgcataca tctcaactaa 61 attttattaa acaaaaataa cgaaatggat aaagtttata tgactctaag aaaccgagtt 121 gtgtactaca ccgaaccaac aagaagagtg cgaaggacca gaagggtgca gagacaagca 181 gatcaaaatg atatgcaagt ggtaaagcca atcgagccat cgccgttacc ggcagaaaat 241 gggagtgacc aatcgagtga tagcgaaatg gatctggaga tcccctgata taagttggag 301 gtgcgttaaa tatgttgtaa tttttgttaa tattttagtg cgagtgaaat tcaaattcca 361 gttgtatttt tagttgaagt ttaatttaaa ttctggtaca acaacaacaa ccacaacagc 421 aatatgagag caccaaggag caacaacaac aacaacagca acccaattgc tttgacacac 481 aaacccacac atagaaatta aaacaaaacg cccgcggcag cagcagcagc agcaaaaaca 541 acaataccaa aggcaaggag agagcaccac caactactca gtgcgcgaaa aagagagcca 601 gagagtgctg ttccagggag tcacagttag ttggccatgg caaagcagag cgagcgagac 661 aaagcgagcg tgcccggaag gcacgaagaa aaaaaaacaa ccaccatgat tgtcgtcccc 721 ccagcatggc cacagagaga gcgagcgaga gagcgcgcga gagggcgcgt ggcgagagca 781 gcatggcgga gcgtaagcca aagcaggaca gcactagcgc tgcgctgctg ctgctgctct 841 ctgccccgct cgctgcccgc gccgctgccc gcagccaagt gattcgtttt gtacgttgtt 901 agactctctc gccgcgtttt ggaattcagt cggcaatcga cgataattac cggtggttct 961 atcacatcac gcgcagcagc agcagcacga agaagaagaa gaagaggcag tagcagtagc 1021 agagaaactc gctcgttttc ggatctatat atatatatat acgcatatat atatgtacta 1081 cgaattttcg tttgccttta atttgtttgt gttttttccg tgttctcctc cgcatgtgca 1141 tgcaattacg tgcgccgcgg caaaagacta taattataaa actaaagtga aaagcgtgcc 1201 ataattacac gagcgaatat caataagtgc gaataagagc gaagagcaat gtgcgaaaat 1261 tgctaacgaa gtagtagccg aaaaaaaaac ataatcgcag attccaaaaa gaaaaaacct 1321 taaaatccaa cgaaagaaaa gctaccgttt ttcaaaatga tcgatgcggc ctgcaattac 1381 ctgaatctca atctgaatcc gaatccctat gtgcaacagc agcagcaggc ggcgcaacag 1441 caggcggcgc aacagcagca gcatcatctt cacatgcagc aggcgcagca gcaactgcac 1501 ttgtcgcaac agcagcacca acagcacatg caacacttgc cgcagcagca acaaatgcaa 1561 cagcagcaaa tgcaacagca acagcaaccg caacagcagc cacatgactt cctgctgtcc 1621 gccccctcgt ccctctccgg ctcaagttcc ggctccagtt ccggtggctc tcccatctac 1681 aacagcagcg gcagcggcag cagcaaggcg cccatgaagc tggagctgcc ctatccgcag 1741 gcctcctcca ccggcaccgc ctcacccaat tccagcatcc agtcggcccc ctcctccgcc 1801 tccgtttcgc ccagcatctt cccctcgccc gcccagtcgt tcgcctccat ttcggccagt 1861 ccctcgacgc cctcgaccgc cgccacccac ttggcgccac ccacagcggc aacatcctcg 1921 tcgccgtctt cctcctcctc ctcctcgtcg tcagccgcct cggcatcggc ggcagcggcg 1981 gcggcagcag cggcagccgc agcagcggac ctcggggcag cggcggtcgc cagtgccgcc 2041 tacggctgga ataccgccta ctccggattg ggacctccaa gaagccagtt cccgtatgcc 2101 cagtacgcct ccgattacta cggcaatgcg gtgggcgcca tgtcctcctc ggccgcctgg 2161 ttctcccatc aggagcgtct ctatcagccc tggagctccc agagctatcc gggcttcaac 2221 ttcgacgaca tcgccttcca gacgcagctg cagcggcgct ccgttcgctg cacgtgcccc 2281 aattgcacga acgagatgag cggactgccg ccgattgtgg gtcccgatga gcgcggtcgc 2341 aagcagcaca tctgtcacat tcccggctgc gagaggctgt acggcaaggc ctcccatttg 2401 aagacccacc tgcgctggca cacgggcgag cggcccttcc tgtgcctcac ctgcggcaag 2461 cgattctcgc gatccgacga actgcagcgg cacggcagga cgcacaccaa ctaccggccc 2521 tacgcctgcc ccatttgctc caagaagttc tcgcgcagcg atcatttgag caagcacaag 2581 aagacccatt tcaaggacaa gaagagcaag aaggctctgg ccgccgaggc caaggagcag 2641 gcggcggcgg cgataaagca ggagaagaag gagaagaagg cggggaagca gcctttggtg 2701 actccagtgg agttcaagca ggagcagccg gaggttgcag cgccgctggt caactatgcg 2761 ccgtatgcga atctctacca gcaatcgagt ggcggctccg ccaatgcact gccaccaccg 2821 ccgccgctct tccagcagca tcatcatcag cagcagatgg cttcctcctc ctcctccgcc 2881 gccgcaggct atgtggagca gcagccctgg agcagccgtg ccatacagca accagcagca 2941 gcagtcgtca ctacctcagc gaactcaacc acatccacag cctccagtgc ggccagttca 3001 ccagcgacgg cggcggcagc ggcggtggcg gcatcctcgc cagccgcctc ggcgacggca 3061 ctggccgccc agcatcacta tgccgctctg gccatgcaga gtgaatccca gctggccgcc 3121 gaatatgggc tgaccatgag cggactggcc agcggagcga gccaggactc aagctccagt 3181 tgtcacatga agtccgagta tgcggccagt tatccagctg aattcggagc gggcaccgcc 3241 agctacggct atccgcatcc gcatccgcat catcacaatg cctgggcagc ggcctatcat 3301 ccgcatgcca cggcctagga ttcaaaggat tcctcatccc ccaagattgt tacagtttaa 3361 agttgaaaga acaaaacgaa atgccataaa gtcccgaaag aaggcaaaga aagcaagcgt 3421 agaacgaacc tctagtgtgt gtgttttttt tcagtgttta ttgttgatat atataaaaat 3481 agatgtgaaa atcgaagaaa aaaaaatcca caaataccgc ctaagacatt atattacatt 3541 acatattata attatatatt atatatatta actatacatg tagctagttc tagaaatttt 3601 ttttcaattt tttttccccc ccaaaaacct agttaaggca tttttttttg catgtctgta 3661 catacaaata tatatcgtgt ttttttttaa gccataccat atagaatgag agaaaccatc 3721 tagttgtgta ccataataat tgttaattgt ctttaagata aattatatac aaagcaaac