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LOCUS XM_070218901 2217 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_070218901 VERSION XM_070218901.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2217 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2217 /gene="upd3" /note="unpaired 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108060960" CDS 520..1668 /gene="upd3" /codon_start=1 /product="uncharacterized protein upd3" /protein_id="XP_070075002.1" /db_xref="GeneID:108060960" /translation="MTAADPPLDVSRSSSKTARTRRPPLVDRRHPNRICSLATLALLM CQLYMAFGGIGGDGAFGGVSAAPSLSTAVTMAPLKHLQKRSGVNFKATFQQLLNASST HLDWENTCNSKPTGLVEKRNKTKRCKKRHMILQKLQRQTGRELRGLQVEDSQRTPVEN MNTLARKNISALNIRKMKRYQFHMRNYTTFLPRLSNSSNQLNLRHVHRDLQHFVGTFT YLRNAKMHWDVVNLQARSVLADELGRLRKSARDMLCSVEDVINLTNLLYAPNPRKKLR HQKRRRQAQPVVTFRIQPRAVMEKWLNQFKSNPVELNQQATLAARGVDVPPPADSTDL ANDALFAKFKFVQYMKSIRVILSRQRQRKGCRVSPTPKAVTPRSQIES" misc_feature 763..1308 /gene="upd3" /note="Unpaired protein; Region: Unpaired; pfam15972" /db_xref="CDD:374263" ORIGIN 1 tccgtcaaag acagccaaag gcgaaaaaag ttgcgaaaaa agaaggaaaa aggctgcgaa 61 aaaagcgaag cgaggaaggc gacgagaaag ccactccaat ccacttcact ccactccact 121 ccactccaca aaacaacagt ctactccact ccacgctcgg catcgccacg ctctccaccc 181 ggcgagaaat cgacagcgac tttgacttcg acggcgggcc attcgatcgg atcggaatca 241 aatcatagca gacagtcgaa ggcagcgcgt cgacacttaa cgcgatagtt cctcctgctc 301 caacaaaaag ataaaaagat acaaagatac atccaatcgc caacttgcca atccgcgttc 361 gccaagttct tgttattatt tttatatttt ttttggttac attctggaag cttccttccg 421 gcaaaaaatc aaaaagaaaa ctaccaagta aaaaacccaa gtgcgtgtca accaagtacg 481 aattttgtgc ggatttccca gccaactatt tttatgtaaa tgacggcagc tgacccaccg 541 ctcgacgtca gcaggagcag cagcaaaacg gccaggacaa ggaggccgcc cctcgtggat 601 cgacgtcatc cgaacaggat ctgttcgctg gccacgctcg ccttgctcat gtgccaatta 661 tatatggctt tcggcggcat cggtggcgat ggggcctttg ggggcgtctc ggctgcccca 721 tctctgagta ccgccgttac catggccccg ctgaagcatc tgcaaaaacg ctcgggtgtg 781 aacttcaagg cgaccttcca gcagctgctg aacgccagca gtacgcacct ggactgggag 841 aacacctgca acagcaagcc aacgggcctg gttgagaagc gcaacaagac gaagcgctgc 901 aagaagcggc acatgatcct gcagaagttg cagcggcaaa cgggccgcga attgaggggc 961 cttcaggtcg aggacagcca aaggaccccg gtcgagaata tgaacacgtt ggccaggaag 1021 aacataagcg ccctcaacat acgcaaaatg aagaggtatc agttccacat gcgcaactac 1081 acaacgtttt tgccccggct gagcaacagc agtaatcagc tgaacctgcg ccacgtgcac 1141 cgcgacctgc agcacttcgt gggcaccttc acctacctgc gcaacgccaa gatgcactgg 1201 gacgtggtca acctgcaggc gcggagcgtg ctggccgacg agctggggcg gctgcgcaag 1261 tcggcgaggg acatgctctg cagcgtggag gacgtgatca acctgaccaa cctgctgtac 1321 gcccccaatc cgcgcaagaa gctgcgccac cagaagcggc ggcggcaggc ccagccggtg 1381 gtgaccttca ggatccagcc gcgagccgtg atggagaagt ggctgaatca gttcaagtcc 1441 aatcccgtcg agctcaacca gcaggcgacc ttggccgccc gcggcgtgga cgtaccgccg 1501 ccggccgact ccacggatct ggccaacgat gcgctgttcg ccaaattcaa gttcgtgcag 1561 tacatgaaga gcatccgcgt gattctcagc cgtcagcggc agcggaaggg ttgcagggtg 1621 agccccaccc ccaaggcggt gaccccaagg agccagatcg aaagctaaag gagagaaaaa 1681 aactcaaaac cggtgaaacc tccattccag aaaacgaggc tcattccatg aagacatcct 1741 taatttatta aacattctat atttattact cacgccacca tacctctcac gacgaatcac 1801 gaggaatccc cgacaatccc taggctatga atgaaaaccg aataagtaat gagaacaacc 1861 aaactaaaac cgaatgaaga tacccagttt tctcgatatc tcaagacgaa tgtaattctt 1921 tttttttttg accctataat aagtaagttc tattgtatta tttatatata ctatatgtcg 1981 tcaactcgcc aacaatctgc cgcacattcc gctagatact aagtgtacta agatatactt 2041 tgccttgtat tacgatgctg tgatagtaga tgattaaagt gaaaacacaa cgctccacga 2101 tggcccataa gagctatgaa agatatctcc cccgattata tacacggata tacctatacc 2161 taaagatata tatgtacgat tatacacacc tcgatgtaac ttagctttgt ttaggta