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LOCUS XM_070218899 2743 bp mRNA linear INV 09-DEC-2024 (Pink1), transcript variant X3, mRNA. ACCESSION XM_070218899 VERSION XM_070218899.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2743 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2743 /gene="Pink1" /note="PTEN-induced putative kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:108067642" CDS 590..2641 /gene="Pink1" /codon_start=1 /product="serine/threonine-protein kinase Pink1, mitochondrial" /protein_id="XP_070075000.1" /db_xref="GeneID:108067642" /translation="MSVRLLTVRLIKHGRYILRSYCKRDIHANILDQNQLKTRSKRGF PLPSASAAHVPRTTPQQAAKSVVNVVPPSAGSPLGGRSPSSGLFRVGQHARKLFIDNI LSRVTTAYSEDLRQRATRRLFFGDSAPFFALIGVSLASGGGVLSKEDELEGVCWEIRE AAGRLQRAWNQDDISETLDSRFSIDDLEIGPPIAKGCAAVVYAAGFKKDADLSSQPSD VETPAVAPNSWSGQEMLMSPLQNMSRFVHNFGGSVDNIFHYSQPSAASDFVGAQEREQ QQEQQDPRSSALNENSPRNSSNNYPLALKMMFNYDIQSNALSILRAMYKETVPARQRG MNEASGEWERLLQRQTVALPPHPNIVCMFGFFCDEVRNFPDGHLLYPVAQPPRINPQG YGRNMSLYLLMKRYDHSLRGLLDSQELDTRTRILLLAQMLEGVNHLSRHGVAHRDLKS DNVLIELQDDASPVLVLSDFGCCLADKVHGLRLPYVSPDVDKGGNAALMAPEIFNTLP GPFAVLNYGKADLWACGALAYEIFGSRNPFYASVGEQTLSLRNSDYRQEQLPPMGDAC PPLLQQLVHNILNPNPSKRVSPDIAANVVQLFLWAPSNWLKAGGMPGSSEILQWLLSL TTKIMCEGRPQLAAGSWAAAAAAGRRAYVEYLLICSFLARARLRRIRGALNWIQNAVV A" misc_feature 1487..2389 /gene="Pink1" /note="Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; Region: STKc_PINK1; cd14018" /db_xref="CDD:270920" misc_feature order(1814..1816,1820..1822,1928..1930,1934..1936, 1940..1942,2003..2005,2069..2080) /gene="Pink1" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270920" misc_feature order(1991..2020,2027..2080) /gene="Pink1" /note="activation loop (A-loop); other site" /db_xref="CDD:270920" polyA_site 2743 /gene="Pink1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 attccagcgt aattagctgc tttattacag cggaatataa gcctaaaaaa aagatagaca 61 agtgttagct tcggtggcct ttttcagtgg tccaaaaata ttcgagctgg cagcgattat 121 ctaacgacaa aatcgaaacg aaacgaagca gtaggcggag ataataaaaa taaggcagcc 181 aggcaagttg gcttcttcgt aaattatccg ttccgtccag ttgaaaaaaa agagcaaaat 241 ctagaccagc ccgcaaggaa tcgagaaggc gacataactt ttgagtcaga ggaaaaccac 301 catttcgatt tgcggatttt gccttgtagt tgcaccctgc ccacaccctc cccctgcaag 361 ccacccactt gcagcaccac cacccacaaa caaaatataa aatatattta cgacgcaaaa 421 acaaaacaat cgaatcggcg caccagctgt tcggctatcg aaccgcacta tcgatctcac 481 gcacatgagc aacgttggcg aggaagaaga agcagcagca gcaaggaacc taaaaaaata 541 actccttcag ttacaggcac tggtagccga gctctttgtg ggccgaaaga tgtctgtgag 601 actgctgacc gtgcgactga tcaaacatgg tcgctacatt ttgcgcagct actgtaaacg 661 tgatatacac gccaacattt tggaccagaa tcaattgaag acgagaagca agcgcggctt 721 tcccctaccc tccgcctccg ccgcccatgt gccgcggacg acgccccagc aggcggccaa 781 atcggtggtc aatgtagtgc ctcctagtgc aggatctccg ttgggcggga ggagcccctc 841 cagcggcctc ttccgcgtgg gccagcatgc ccgcaaactg ttcatcgaca acatcctcag 901 ccgggtgacc accgcctact cggaggatct gcgccagcgg gccacgcgac gcctcttctt 961 cggcgactcg gctccctttt tcgccctgat aggcgtgagt ttggcctccg gcggcggtgt 1021 cctcagcaag gaggacgaac tggagggcgt gtgctgggag attcgcgagg ccgccggccg 1081 attgcagcgg gcctggaacc aggacgacat ctccgagacg ctggacagca ggttcagcat 1141 cgatgatttg gaaatcgggc cgcccattgc caagggctgt gccgccgtcg tctacgcggc 1201 gggatttaag aaggatgcgg atttaagcag ccagccctcc gatgtggaga caccagccgt 1261 tgctccaaat agctggagtg gccaggagat gttgatgtcg ccgctgcaga acatgtcgcg 1321 cttcgtgcac aactttggcg gctctgtgga caacatcttt cactacagtc agccctcggc 1381 ggccagcgac tttgtgggcg cccaggagag ggagcagcag caggagcagc aggatcccag 1441 aagcagtgcc ttaaatgaga attccccgcg gaacagttcg aacaactatc cactggccct 1501 gaagatgatg ttcaactacg acatccagag caacgccttg tccatcctgc gcgccatgta 1561 caaggagaca gtacccgccc gccagcgcgg catgaacgag gcctccggcg agtgggagcg 1621 cctgctgcag cgccaaacgg tcgccctgcc gccgcatccg aatatcgtct gcatgttcgg 1681 cttcttctgc gacgaggtgc gcaactttcc cgacggccat ctcctgtatc cggtggccca 1741 gccgccgcgg atcaatccgc agggctacgg ccgcaacatg tcgctgtatc tgctgatgaa 1801 gcgctacgat cacagtctgc gcggcctgct cgacagccag gagctggaca cgcgcacccg 1861 catcctgctg ctggcccaaa tgctcgaggg cgtgaaccat ttgagccgcc acggggtggc 1921 ccatcgggat ctcaagtcgg acaacgtgct gatcgagctg caggacgatg cctcgccggt 1981 gctggtgctc tcggactttg gctgctgcct ggcggacaag gtgcacggcc tgcggctgcc 2041 ctacgtctcg ccggacgtcg acaagggcgg caatgcggcg ctgatggcgc cggagatctt 2101 caacacgctg cccggtccct ttgccgtcct caactacggc aaggcggacc tgtgggcctg 2161 cggtgcgctg gcctacgaga tcttcggcag ccgcaatccc ttctacgcga gcgtcggcga 2221 gcagacactg tcgctgcgga acagcgacta ccggcaggag cagctgccgc cgatgggcga 2281 cgcctgtccg ccgctgctgc agcagctggt ccacaacatc ctcaatccca acccgtcgaa 2341 gcgggtcagt ccggacattg cggcgaatgt ggtgcagctc ttcctgtggg ccccctccaa 2401 ttggctcaag gcgggcggca tgcccggcag ctcggagatc ctccagtggc tgctctcgct 2461 gaccaccaag atcatgtgcg agggccgtcc gcagctggcg gcgggcagct gggcagccgc 2521 cgccgccgcc ggcagacgcg cctacgtgga gtacctgctc atctgcagct tcctggcgcg 2581 cgcccgcctg cgtcgcattc gcggcgccct caactggatc cagaatgcgg tggtggcgta 2641 ggcgctgcct gcccatctat ctacctgtta ccctgagaaa atcaaatgga aaagcgtgtg 2701 atacctatat tttacatatg tatttataaa tcaaaaatcg aaa