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LOCUS XM_070218898 2729 bp mRNA linear INV 09-DEC-2024 (Pink1), transcript variant X2, mRNA. ACCESSION XM_070218898 VERSION XM_070218898.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2729 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2729 /gene="Pink1" /note="PTEN-induced putative kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:108067642" CDS 576..2627 /gene="Pink1" /codon_start=1 /product="serine/threonine-protein kinase Pink1, mitochondrial" /protein_id="XP_070074999.1" /db_xref="GeneID:108067642" /translation="MSVRLLTVRLIKHGRYILRSYCKRDIHANILDQNQLKTRSKRGF PLPSASAAHVPRTTPQQAAKSVVNVVPPSAGSPLGGRSPSSGLFRVGQHARKLFIDNI LSRVTTAYSEDLRQRATRRLFFGDSAPFFALIGVSLASGGGVLSKEDELEGVCWEIRE AAGRLQRAWNQDDISETLDSRFSIDDLEIGPPIAKGCAAVVYAAGFKKDADLSSQPSD VETPAVAPNSWSGQEMLMSPLQNMSRFVHNFGGSVDNIFHYSQPSAASDFVGAQEREQ QQEQQDPRSSALNENSPRNSSNNYPLALKMMFNYDIQSNALSILRAMYKETVPARQRG MNEASGEWERLLQRQTVALPPHPNIVCMFGFFCDEVRNFPDGHLLYPVAQPPRINPQG YGRNMSLYLLMKRYDHSLRGLLDSQELDTRTRILLLAQMLEGVNHLSRHGVAHRDLKS DNVLIELQDDASPVLVLSDFGCCLADKVHGLRLPYVSPDVDKGGNAALMAPEIFNTLP GPFAVLNYGKADLWACGALAYEIFGSRNPFYASVGEQTLSLRNSDYRQEQLPPMGDAC PPLLQQLVHNILNPNPSKRVSPDIAANVVQLFLWAPSNWLKAGGMPGSSEILQWLLSL TTKIMCEGRPQLAAGSWAAAAAAGRRAYVEYLLICSFLARARLRRIRGALNWIQNAVV A" misc_feature 1473..2375 /gene="Pink1" /note="Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; Region: STKc_PINK1; cd14018" /db_xref="CDD:270920" misc_feature order(1800..1802,1806..1808,1914..1916,1920..1922, 1926..1928,1989..1991,2055..2066) /gene="Pink1" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270920" misc_feature order(1977..2006,2013..2066) /gene="Pink1" /note="activation loop (A-loop); other site" /db_xref="CDD:270920" polyA_site 2729 /gene="Pink1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 attccagcgt aattagctgc tttattacag cggaatataa gcctaaaaaa aagatagaca 61 agtgttagct tcggtggcct ttttcagtgg tccaaaaata ttcgagctgg cagcgattat 121 ctaacgacaa aatcgaaacg aaacgaagca gtaggcggag ataataaaaa taaggcagcc 181 aggcaagttg gcttcttcgt aaattatccg ttccgtccag ttgaaaaaaa agagcaaaat 241 ctagaccagc ccgcaaggaa tcgagaaggc gacataactt ttgagtcaga ggaaaaccac 301 catttcgatt tgcggatttt gccttgtagt tgcaccctgc ccacaccctc cccctgcaag 361 ccacccactt gcagcaccac cacccacaaa caaaatataa aatatattta cgacgcaaaa 421 acaaaacaat cgaatcggcg caccagctgt tcggctatcg aaccgcacta tcgatctcac 481 gcacatgagc aacgttggcg aggaagaaga agcagcagca gcaaggaacc taaaaaaata 541 acgcactggt agccgagctc tttgtgggcc gaaagatgtc tgtgagactg ctgaccgtgc 601 gactgatcaa acatggtcgc tacattttgc gcagctactg taaacgtgat atacacgcca 661 acattttgga ccagaatcaa ttgaagacga gaagcaagcg cggctttccc ctaccctccg 721 cctccgccgc ccatgtgccg cggacgacgc cccagcaggc ggccaaatcg gtggtcaatg 781 tagtgcctcc tagtgcagga tctccgttgg gcgggaggag cccctccagc ggcctcttcc 841 gcgtgggcca gcatgcccgc aaactgttca tcgacaacat cctcagccgg gtgaccaccg 901 cctactcgga ggatctgcgc cagcgggcca cgcgacgcct cttcttcggc gactcggctc 961 cctttttcgc cctgataggc gtgagtttgg cctccggcgg cggtgtcctc agcaaggagg 1021 acgaactgga gggcgtgtgc tgggagattc gcgaggccgc cggccgattg cagcgggcct 1081 ggaaccagga cgacatctcc gagacgctgg acagcaggtt cagcatcgat gatttggaaa 1141 tcgggccgcc cattgccaag ggctgtgccg ccgtcgtcta cgcggcggga tttaagaagg 1201 atgcggattt aagcagccag ccctccgatg tggagacacc agccgttgct ccaaatagct 1261 ggagtggcca ggagatgttg atgtcgccgc tgcagaacat gtcgcgcttc gtgcacaact 1321 ttggcggctc tgtggacaac atctttcact acagtcagcc ctcggcggcc agcgactttg 1381 tgggcgccca ggagagggag cagcagcagg agcagcagga tcccagaagc agtgccttaa 1441 atgagaattc cccgcggaac agttcgaaca actatccact ggccctgaag atgatgttca 1501 actacgacat ccagagcaac gccttgtcca tcctgcgcgc catgtacaag gagacagtac 1561 ccgcccgcca gcgcggcatg aacgaggcct ccggcgagtg ggagcgcctg ctgcagcgcc 1621 aaacggtcgc cctgccgccg catccgaata tcgtctgcat gttcggcttc ttctgcgacg 1681 aggtgcgcaa ctttcccgac ggccatctcc tgtatccggt ggcccagccg ccgcggatca 1741 atccgcaggg ctacggccgc aacatgtcgc tgtatctgct gatgaagcgc tacgatcaca 1801 gtctgcgcgg cctgctcgac agccaggagc tggacacgcg cacccgcatc ctgctgctgg 1861 cccaaatgct cgagggcgtg aaccatttga gccgccacgg ggtggcccat cgggatctca 1921 agtcggacaa cgtgctgatc gagctgcagg acgatgcctc gccggtgctg gtgctctcgg 1981 actttggctg ctgcctggcg gacaaggtgc acggcctgcg gctgccctac gtctcgccgg 2041 acgtcgacaa gggcggcaat gcggcgctga tggcgccgga gatcttcaac acgctgcccg 2101 gtccctttgc cgtcctcaac tacggcaagg cggacctgtg ggcctgcggt gcgctggcct 2161 acgagatctt cggcagccgc aatcccttct acgcgagcgt cggcgagcag acactgtcgc 2221 tgcggaacag cgactaccgg caggagcagc tgccgccgat gggcgacgcc tgtccgccgc 2281 tgctgcagca gctggtccac aacatcctca atcccaaccc gtcgaagcgg gtcagtccgg 2341 acattgcggc gaatgtggtg cagctcttcc tgtgggcccc ctccaattgg ctcaaggcgg 2401 gcggcatgcc cggcagctcg gagatcctcc agtggctgct ctcgctgacc accaagatca 2461 tgtgcgaggg ccgtccgcag ctggcggcgg gcagctgggc agccgccgcc gccgccggca 2521 gacgcgccta cgtggagtac ctgctcatct gcagcttcct ggcgcgcgcc cgcctgcgtc 2581 gcattcgcgg cgccctcaac tggatccaga atgcggtggt ggcgtaggcg ctgcctgccc 2641 atctatctac ctgttaccct gagaaaatca aatggaaaag cgtgtgatac ctatatttta 2701 catatgtatt tataaatcaa aaatcgaaa