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LOCUS XM_070218897 2734 bp mRNA linear INV 09-DEC-2024 (Pink1), transcript variant X1, mRNA. ACCESSION XM_070218897 VERSION XM_070218897.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2734 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2734 /gene="Pink1" /note="PTEN-induced putative kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:108067642" CDS 581..2632 /gene="Pink1" /codon_start=1 /product="serine/threonine-protein kinase Pink1, mitochondrial" /protein_id="XP_070074998.1" /db_xref="GeneID:108067642" /translation="MSVRLLTVRLIKHGRYILRSYCKRDIHANILDQNQLKTRSKRGF PLPSASAAHVPRTTPQQAAKSVVNVVPPSAGSPLGGRSPSSGLFRVGQHARKLFIDNI LSRVTTAYSEDLRQRATRRLFFGDSAPFFALIGVSLASGGGVLSKEDELEGVCWEIRE AAGRLQRAWNQDDISETLDSRFSIDDLEIGPPIAKGCAAVVYAAGFKKDADLSSQPSD VETPAVAPNSWSGQEMLMSPLQNMSRFVHNFGGSVDNIFHYSQPSAASDFVGAQEREQ QQEQQDPRSSALNENSPRNSSNNYPLALKMMFNYDIQSNALSILRAMYKETVPARQRG MNEASGEWERLLQRQTVALPPHPNIVCMFGFFCDEVRNFPDGHLLYPVAQPPRINPQG YGRNMSLYLLMKRYDHSLRGLLDSQELDTRTRILLLAQMLEGVNHLSRHGVAHRDLKS DNVLIELQDDASPVLVLSDFGCCLADKVHGLRLPYVSPDVDKGGNAALMAPEIFNTLP GPFAVLNYGKADLWACGALAYEIFGSRNPFYASVGEQTLSLRNSDYRQEQLPPMGDAC PPLLQQLVHNILNPNPSKRVSPDIAANVVQLFLWAPSNWLKAGGMPGSSEILQWLLSL TTKIMCEGRPQLAAGSWAAAAAAGRRAYVEYLLICSFLARARLRRIRGALNWIQNAVV A" misc_feature 1478..2380 /gene="Pink1" /note="Catalytic domain of the Serine/Threonine protein kinase, Pten INduced Kinase 1; Region: STKc_PINK1; cd14018" /db_xref="CDD:270920" misc_feature order(1805..1807,1811..1813,1919..1921,1925..1927, 1931..1933,1994..1996,2060..2071) /gene="Pink1" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270920" misc_feature order(1982..2011,2018..2071) /gene="Pink1" /note="activation loop (A-loop); other site" /db_xref="CDD:270920" polyA_site 2734 /gene="Pink1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttccagcgta attagctgct ttattacagc ggaatataag cctaaaaaaa agatagacaa 61 gtgttagctt cggtggcctt tttcagtggt ccaaaaatat tcgagctggc agcgattatc 121 taacgacaaa atcgaaacga aacgaagcag taggcggaga taataaaaat aaggcagcca 181 ggcaagttgg cttcttcgta aattatccgt tccgtccagt tgaaaaaaaa gagcaaaatc 241 tagaccagcc cgcaaggaat cgagaaggcg acataacttt tgagtcagag gaaaaccacc 301 atttcgattt gcggattttg ccttgtagtt gcaccctgcc cacaccctcc ccctgcaagc 361 cacccacttg cagcaccacc acccacaaac aaaatataaa atatatttac gacgcaaaaa 421 caaaacaatc gaatcggcgc accagctgtt cggctatcga accgcactat cgatctcacg 481 cacatgagca acgttggcga ggaagaagaa gcagcagcag caaggaacct aaaaaaataa 541 cttacaggca ctggtagccg agctctttgt gggccgaaag atgtctgtga gactgctgac 601 cgtgcgactg atcaaacatg gtcgctacat tttgcgcagc tactgtaaac gtgatataca 661 cgccaacatt ttggaccaga atcaattgaa gacgagaagc aagcgcggct ttcccctacc 721 ctccgcctcc gccgcccatg tgccgcggac gacgccccag caggcggcca aatcggtggt 781 caatgtagtg cctcctagtg caggatctcc gttgggcggg aggagcccct ccagcggcct 841 cttccgcgtg ggccagcatg cccgcaaact gttcatcgac aacatcctca gccgggtgac 901 caccgcctac tcggaggatc tgcgccagcg ggccacgcga cgcctcttct tcggcgactc 961 ggctcccttt ttcgccctga taggcgtgag tttggcctcc ggcggcggtg tcctcagcaa 1021 ggaggacgaa ctggagggcg tgtgctggga gattcgcgag gccgccggcc gattgcagcg 1081 ggcctggaac caggacgaca tctccgagac gctggacagc aggttcagca tcgatgattt 1141 ggaaatcggg ccgcccattg ccaagggctg tgccgccgtc gtctacgcgg cgggatttaa 1201 gaaggatgcg gatttaagca gccagccctc cgatgtggag acaccagccg ttgctccaaa 1261 tagctggagt ggccaggaga tgttgatgtc gccgctgcag aacatgtcgc gcttcgtgca 1321 caactttggc ggctctgtgg acaacatctt tcactacagt cagccctcgg cggccagcga 1381 ctttgtgggc gcccaggaga gggagcagca gcaggagcag caggatccca gaagcagtgc 1441 cttaaatgag aattccccgc ggaacagttc gaacaactat ccactggccc tgaagatgat 1501 gttcaactac gacatccaga gcaacgcctt gtccatcctg cgcgccatgt acaaggagac 1561 agtacccgcc cgccagcgcg gcatgaacga ggcctccggc gagtgggagc gcctgctgca 1621 gcgccaaacg gtcgccctgc cgccgcatcc gaatatcgtc tgcatgttcg gcttcttctg 1681 cgacgaggtg cgcaactttc ccgacggcca tctcctgtat ccggtggccc agccgccgcg 1741 gatcaatccg cagggctacg gccgcaacat gtcgctgtat ctgctgatga agcgctacga 1801 tcacagtctg cgcggcctgc tcgacagcca ggagctggac acgcgcaccc gcatcctgct 1861 gctggcccaa atgctcgagg gcgtgaacca tttgagccgc cacggggtgg cccatcggga 1921 tctcaagtcg gacaacgtgc tgatcgagct gcaggacgat gcctcgccgg tgctggtgct 1981 ctcggacttt ggctgctgcc tggcggacaa ggtgcacggc ctgcggctgc cctacgtctc 2041 gccggacgtc gacaagggcg gcaatgcggc gctgatggcg ccggagatct tcaacacgct 2101 gcccggtccc tttgccgtcc tcaactacgg caaggcggac ctgtgggcct gcggtgcgct 2161 ggcctacgag atcttcggca gccgcaatcc cttctacgcg agcgtcggcg agcagacact 2221 gtcgctgcgg aacagcgact accggcagga gcagctgccg ccgatgggcg acgcctgtcc 2281 gccgctgctg cagcagctgg tccacaacat cctcaatccc aacccgtcga agcgggtcag 2341 tccggacatt gcggcgaatg tggtgcagct cttcctgtgg gccccctcca attggctcaa 2401 ggcgggcggc atgcccggca gctcggagat cctccagtgg ctgctctcgc tgaccaccaa 2461 gatcatgtgc gagggccgtc cgcagctggc ggcgggcagc tgggcagccg ccgccgccgc 2521 cggcagacgc gcctacgtgg agtacctgct catctgcagc ttcctggcgc gcgcccgcct 2581 gcgtcgcatt cgcggcgccc tcaactggat ccagaatgcg gtggtggcgt aggcgctgcc 2641 tgcccatcta tctacctgtt accctgagaa aatcaaatgg aaaagcgtgt gatacctata 2701 ttttacatat gtatttataa atcaaaaatc gaaa