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LOCUS XM_070218894 2490 bp mRNA linear INV 09-DEC-2024 (LOC108062280), transcript variant X2, mRNA. ACCESSION XM_070218894 VERSION XM_070218894.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2490 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2490 /gene="LOC108062280" /note="uncharacterized LOC108062280; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108062280" CDS 192..2399 /gene="LOC108062280" /codon_start=1 /product="uncharacterized protein isoform X2" /protein_id="XP_070074995.1" /db_xref="GeneID:108062280" /translation="MQAHLRPPPPPPPLIPFEEKKRELGGEIPKGPMIEEELSQSSED GTQPGIGFVDLFRRSLHFECLGIPLTPLELYSMERQRSETKEPEMSGRILGGFRTGTE KEPDKEWDPRGSDTGNPLENTFQLTVFSEKQESPHESGTEEEPSVQKLSSIELAHYSP KFQSRFLEDFPRKISSSRHLSRQPVSYFKSALSSFRLPQKNSKQNSIVHIPSQESVQL SEQPQISYPSAKFPVQSSSKILTKTKKVPKKRESRSAFQGGKKRLASPENTGNTSGSS KKKINVSKMCLNSRWLPCSPERKHHRDRGNPLKASPIHRTSNFKETKLETLLPPRCLK DCHSGSETQLKGFRNTKSPSLEVFDKRLKALLKSEPKKSCLKKSDIDNPDDSDNQPPI ELHSNDTFTEVWRKSELGREHQGKKAKPGQGGLYSRADKLRFQPLDRLDAGCAGLPLF KNSDETLERTQYFVTEFDKLSRAEKMEDIKLRMGQLRWLQSTSDRKYREHFRDRKINF KPVLTNSMKYVCPADEGQCSGVTNATLLGHFLTQHLDESGIELREIFEDQRVLMIFSP KDFELGQNTCVSVIVYGGQRGRPSTLPAERFMPAKNAELPEAYRHFDGHLPLFVMICR NRLSRIEGVEGRRVRFEDEDALALWMVSMDLPRPVHVVMTVINRRLDITRSSIMKVRG IHKSHNCLDFMQHSQQYMRLSDRDLRVLTNEHTEPIYMEIAVKEYAGIFPCHR" misc_feature 1743..2354 /gene="LOC108062280" /note="Domain of unknown function (DUF4729); Region: DUF4729; pfam15866" /db_xref="CDD:434981" polyA_site 2490 /gene="LOC108062280" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttctgctatt ctgagctgaa gatggaaaat agaaagagtg gccgtcaggg aagtcgaaat 61 ggccaattgg agagaaatca caaagatgcc gatgaagagg aaaagccacc acagatactt 121 accataattt ccacttagtg aagggagtgt tggataacct ggccaatggc tacttgaagt 181 tggtccacca aatgcaggct catctccgcc ctccgccgcc accgcctcct ttaatcccgt 241 ttgaggagaa gaaacgcgag ttgggtggag agattcccaa aggcccgatg atcgaggagg 301 agctgtcgca atcctctgag gatggcactc agccgggaat tggctttgtg gacctctttc 361 ggcgcagtct tcatttcgag tgcctgggaa ttcccctaac tcccttggaa ctctactcca 421 tggaacgtca gcgaagcgaa acgaaagaac ctgaaatgag tggtaggata ctgggtggtt 481 ttcgaactgg cactgaaaag gagccagata aggaatggga tcctagagga agtgatacgg 541 ggaaccccct ggaaaatacc tttcaattaa ctgtgttttc ggaaaagcag gaaagtcccc 601 atgaaagtgg cacagaagaa gaacctagtg ttcaaaagct ttcctctata gagctagccc 661 attattcgcc caagtttcag agtcgatttc ttgaagattt tccaagaaaa ataagttctt 721 cccgccatct atctcgtcag cctgtttcgt acttcaaatc tgccctcagc tcatttcggt 781 tgcctcagaa aaattccaag caaaattcca tagttcatat accatcccaa gaatccgttc 841 aactttcaga gcaacctcaa attagttatc ctagtgccaa atttcccgta caaagttcaa 901 gtaaaattct gacaaaaacc aagaaagttc cgaagaaacg tgagtcaaga agtgcatttc 961 aaggtggcaa aaagcgatta gcaagcccag aaaatactgg aaatacttcg ggctcatcta 1021 aaaagaaaat caacgtttct aagatgtgtt taaactcccg atggctgcct tgtagcccag 1081 aaagaaaaca tcatcgtgat agagggaatc ccttaaaggc ttctccaatt caccgaacct 1141 cgaacttcaa ggagacgaaa ttggagaccc ttttaccgcc cagatgtctt aaagattgcc 1201 acagtggcag tgaaactcaa ctgaaaggtt ttaggaatac aaaaagccct tcgttggagg 1261 ttttcgataa gcgcctgaag gctctgctca aaagtgagcc caagaaatcg tgtctaaaga 1321 agtctgatat cgataatccc gatgactccg ataaccagcc gccgattgaa ctgcattcca 1381 acgatacctt tacggaagtc tggcgaaaat ccgagttggg tcgggagcat cagggaaaga 1441 aagcaaaacc aggccaaggt ggactctata gtcgggccga taagctgagg tttcagccgt 1501 tggatcgact ggatgccggt tgtgcagggt tgccactctt caaaaactcc gatgaaactc 1561 tggagcgaac gcagtacttc gtgaccgagt tcgataagct gagtcgagcg gagaagatgg 1621 aggatattaa attgcgaatg ggccagttgc gttggctgca atccacctcg gatcggaaat 1681 atcgcgagca cttcagagat cggaaaatca acttcaagcc cgtactcaca aactccatga 1741 agtatgtgtg ccccgcggat gagggtcaat gttccggcgt aacgaatgcc accttgttgg 1801 gacacttttt gacccaacac ctcgatgaat cgggcattga gctgcgcgag atattcgagg 1861 atcagcgggt gctgatgatc ttcagtccca aggactttga gctgggccag aatacctgcg 1921 tatcggtgat tgtgtacggt ggccaaaggg gcaggcccag caccctgccc gcggagcgat 1981 ttatgccggc gaagaatgcg gaattaccgg aggcctatcg ccatttcgat ggccatctgc 2041 ccctgttcgt gatgatctgc cgcaatcgac tgagtcgaat tgagggcgtg gagggcagga 2101 gggtgcgatt cgaggacgag gatgccctcg ccctgtggat ggtcagcatg gatctgccgc 2161 ggcccgttca tgtggtcatg acggtgatca accggcgact cgatatcacc aggagttcga 2221 tcatgaaggt ccgtggaatc cacaagtcgc acaattgcct cgacttcatg cagcacagcc 2281 agcagtatat gcgactcagc gatcgcgatc tgcgggtcct gaccaacgag cacacggaac 2341 ccatctacat ggagatcgcc gtgaaggagt atgccggcat attcccctgc caccgatagt 2401 aacctatagt tgaccatagt agaagacctt ttataacttt ttacctcttt tgtctagcca 2461 ataaaatgga ttactttgat ttttaaaaaa