Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218865 2863 bp mRNA linear INV 09-DEC-2024 (Pop1), transcript variant X2, mRNA. ACCESSION XM_070218865 VERSION XM_070218865.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2863 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2863 /gene="Pop1" /note="POP1 ribonuclease P/MRP subunit; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108058457" CDS 140..2683 /gene="Pop1" /codon_start=1 /product="ribonucleases P/MRP protein subunit POP1 isoform X2" /protein_id="XP_070074966.1" /db_xref="GeneID:108058457" /translation="MSSSTQKLEYDAAVGGRVALPSHVTTYHYAAVALQEIRTLVADC QETTQRSSKLIFQTLPKHMRRRAMSHHPKRLPRKYRQAHKSQMSKGGNQPVNSKRPSR RYRRRPKNLLREYVRRQRRHLWLETHIWHAKRFHMVDRWGYRLAFASCDKTYRACYRA TTEHCLLQDISFYECLEIRGPLEQLRQGFARLTSPQCGLGVTARTFLSGRREGSVELF KENQYPLGALQRVSFMWRPREEQEKGEHHTLWLWLHPSGAQAILEQLISVFQLKSKKQ QRLPLKEEGKKELLSKEEVKEEHLSGEKRSSKSSQKELRFWTQTKSFDFQPTYSNAEE TIHLISLQRQFNRFRLTGPRAQRVLLASLRPHHQEEEDNYCQAALQLSSPAQLLSNLV MATQVVDPRLQRPKKRTKAEGKEQPKLSPEDLLLNQPANLPESPLWSQEARQRLAGSI MSTHTYNELRQQHSVVPGAPCAFEQQMQAMPVILIQRPGSQDPKYKRLAYGCGWDVIA PAGYGMALWLTLTMWGARPGGLRELDSVAREAGAELHLPDTIAGIQQAAASAEELRAA YFRMPPNKRSNYRKLAVVSPFIAPWKCLLRDWGATPATGSSFYVLRHRQQLEEIAECL RQRRALPQELLHQEALIQIQLRLISRGCVKSNALICLPTQDDHKQRWRQLKRNDQAPV CVEPLQPDLNEQQRKDLRQSHKLKLKRLRARRVREKRQLQEKATKRVYIRPAGTAHLV KAQLEEMSALWLPSDPREMRQSVRRQCSREVFGYVTLASFTFTEALVCAVGYVTAAGL QQLVGGELPNSKGTNSLKEPLMCLLRDPDSRDYRWASFQINLNVASPGL" misc_feature 242..682 /gene="Pop1" /note="Ribonucleases P/MRP protein subunit POP1; Region: POP1; pfam06978" /db_xref="CDD:429227" misc_feature 1646..1912 /gene="Pop1" /note="POPLD (NUC188) domain; Region: POPLD; pfam08170" /db_xref="CDD:462391" ORIGIN 1 gggcgatggg gcgacaagat cgccagtgtt ggaaaacatc gaaatacgaa aatcaacacg 61 tgccgctcgg tttgttttga atttcgattc agagatcccg atcccgagat tccgattccg 121 attcctctcc aaattcccaa tgagtagctc cacccagaag ctggagtacg atgcagcggt 181 gggcggccgg gtcgccctgc cctcgcacgt gaccacctac cactatgcgg ccgtggcgct 241 gcaggagatc cggactttag ttgccgactg ccaggagacg acgcagcgga gcagcaagct 301 gatcttccag acgctgccca agcacatgcg ccgccgggcg atgtcccatc atccaaagcg 361 cctgccccgc aaataccgtc aggcgcacaa atcccagatg tccaagggcg gcaatcagcc 421 ggtaaacagc aaacgaccct cgcgaaggta ccgccggcga cccaagaacc tcctgcgcga 481 atatgtgcgc cggcagaggc gtcacctgtg gctggagacg cacatctggc acgccaagcg 541 cttccacatg gtcgaccggt ggggctatcg cctggctttc gccagctgcg acaaaaccta 601 ccgcgcctgc tatcgcgcca ccacggagca ctgcctcctg caggatatct ccttctatga 661 atgcctggag atcagaggac ctttggagca gctgcgccag ggcttcgccc gcctgaccag 721 tccacaatgc ggcctcggtg tgacggccag aactttcctc agcggaagac gcgagggcag 781 cgtggagctg ttcaaggaga accaatatcc gctgggagct ctacagcgag ttagcttcat 841 gtggcggcca agggaggagc aggagaaggg tgagcatcac acgctctggc tgtggctgca 901 tcctagcgga gcacaggcca tcctggagca gctaatcagc gtgttccagc tgaaatcgaa 961 gaagcaacag aggttgccgc tcaaggagga aggaaaaaaa gagcttctca gcaaggagga 1021 agtaaaggag gagcatctca gcggggaaaa acggtcctcc aagtcgagtc aaaaggaatt 1081 acgcttctgg acccaaacga aatcctttga tttccaaccc acttactcca atgccgagga 1141 aaccattcat ttaatctccc tccagcggca attcaatcgc ttccgcctca caggaccccg 1201 cgcccaacgt gtcctgctgg ccagcctgcg tccgcatcat caggaggagg aggataacta 1261 ctgccaggca gccctgcagc tgagttcgcc cgcccagctg ctttccaacc tggtaatggc 1321 cacccaggtg gtggatccgc gactccagcg acccaagaag cgcacgaagg cggagggaaa 1381 ggagcaaccg aaactctccc ccgaggatct ccttttgaat cagcccgcga atctcccaga 1441 gagtccgctg tggagccagg aggcgcggca gaggctggcc gggagtatta tgtccacgca 1501 cacgtacaat gagctgcgtc aacagcatag cgtggtgcca ggagcgccgt gtgccttcga 1561 gcagcaaatg caggcgatgc ccgtgatact catccaaaga cccggctccc aggatcccaa 1621 atataagcga ttagcctacg gctgcggctg ggatgtgatt gcgccggctg gttatggcat 1681 ggccctttgg ctcacgctca ccatgtgggg cgccaggccg gggggattgc gggaactgga 1741 ttcggtggcc agggaagcgg gcgctgagtt gcatctgccg gatacaatag caggaatcca 1801 gcaggctgct gcttcagctg aggagctacg cgccgcctac ttccgcatgc cgcccaacaa 1861 gcgctcgaac taccggaaac tggcggtggt cagtccgttc attgctccct ggaagtgctt 1921 actgcgcgat tggggcgcta ctcctgccac aggatcctcg ttctacgtgc tgcgccatcg 1981 ccagcagctg gaggagattg ccgagtgcct gcgacaacgt agagcgctgc cgcaggagct 2041 tctgcaccag gaggcactca tccagattca actgcgtttg attagtcgcg gctgcgtgaa 2101 gagcaatgct ctgatttgcc tgcccacgca agatgatcac aagcaacgct ggcgacagct 2161 gaaacgcaat gatcaggccc ctgtttgtgt agagccactg cagccggatt tgaatgaaca 2221 gcagcgcaag gatctgcgcc agagtcacaa gctcaagttg aagcgtttgc gtgcgcggag 2281 ggtgcgtgag aagcggcagc tgcaggagaa ggccaccaag cgtgtttaca tccggccagc 2341 gggcactgct catctggtga aagcccagct ggaggagatg agcgccctgt ggctgcccag 2401 cgatccgcgg gagatgcggc aaagcgtgcg acgtcagtgt agccgtgagg tcttcggtta 2461 tgtcaccttg gccagcttta cgtttaccga ggctctggtc tgcgccgtgg gctatgtaac 2521 cgccgccggt ctgcagcaac tcgtcggagg ggagctaccg aactccaagg gaaccaactc 2581 cctcaaggaa cccctcatgt gcctgctgcg cgatccggat agccgcgact accgctgggc 2641 cagctttcaa atcaatctta atgtggccag tccaggtctt tagagcttag gtcttgtttt 2701 tctgcttgtt agtgccaaat atataatgct atcatatagc aaaaataaga aaataactcg 2761 attctgttat aaatttctaa aaatctgcct aatttttatc aaattaattt agttttctta 2821 ggcattttta tttttaattg aagaaaataa ctagagtctg cat