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LOCUS XM_070218864 6000 bp mRNA linear INV 09-DEC-2024 transcript variant X9, mRNA. ACCESSION XM_070218864 VERSION XM_070218864.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6000 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6000 /gene="OtopLa" /note="Otopetrin-like a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108058416" CDS 224..2947 /gene="OtopLa" /codon_start=1 /product="proton channel OtopLc isoform X7" /protein_id="XP_070074965.1" /db_xref="GeneID:108058416" /translation="MGGGEVKVATVDVEGGDNMATLPVSRSHTAGSTDSAEKNNAANK EMELKNVMPQPLQRTSLFIVTSLVYAILLIVVCIAYVISDVTTHRLPVLYYETFFTYL YGVSILFLLYVFCFLLQESSCCNGGNGGSKPKPQPKEKKSKKAKNADPADSKDAKGSK DSGKAAKGAAYQEAPVDAEVAVTPKNVRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIY IGLEFGSFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFMNARTRPPFQLNIHRFK VIARFGLMHVVATNICVWIRTLVKESLLEITIYHQKNEPEAGASSIAHSIRQHALRHA GTVLRTHAGPNSEFEVLDGEDILPKDVYKSDNVLSKLVRNTVDGISKSLGMGGDLTST SSTTSTTTRAPFTTPNYQWHSTTMARKLKKFITSATTAATTAAGGSGTTTTSSTTISP STTTSTIDPSSSTTTTTTTFSPFSTTTATNNNLETSSGLQRLLSSSANPPSLAPVDGF GSAVTPTSVSGSGSFMDSFLSSTLSPASSTEGSASIMNNLFGQQGPMENSFQTYSDLG HEEVTGLVSFENLESLDNIYPAALSSNIGTLNSTACGRIDIMGTIVYDSAPYLYPFII EYSLIGAVVLYVMWKHIGRYPGRMNDEDLEHRLEVMLSRRAVAMAQQQRSGRVDCVGS SKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLADASHCILMAFAILAIIVGFI RVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSIIAGSLKVLESEPSLLVTTTGGVA VFQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAMFAIYTFEAQKVFAN PVSRYVQLEFYGFVPWSIIQRITLPLCIFHRFHSAVTLAEIWKTTYKARLE" misc_feature 830..>1291 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" misc_feature <1976..2887 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" polyA_site 6000 /gene="OtopLa" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccgtttcagt ttcagttgta gttggatagt aaagggtctt ggacgtgtcg agcgaatcgt 61 tcgccagagt taagagctgt gaactgtgca attaaggaaa caagaacaaa caagtcgccg 121 ccgcgaagga ccaacaaatc ctatcgccta tcgataaaga tcggaaatcg aagatcgtcg 181 ttaaaaagcc agcacaacgg agaccgaaac ggaaacagag gcaatgggcg gcggtgaagt 241 gaaggtcgct accgtcgacg tcgagggcgg tgacaacatg gccacgctgc cggtgtcccg 301 ctcgcatacc gccggcagca cagacagcgc cgagaagaac aacgcggcca acaaggagat 361 ggagctcaag aatgtcatgc cgcagccgct gcagaggaca tcgctgttca tcgtgaccag 421 tctggtgtac gcgatcctac tgatcgtcgt ctgcattgca tacgtaatca gcgatgtaac 481 cacccaccga ctgccggttc tctactacga gacattcttc acatatctct acggcgtcag 541 catactcttc ctcctttacg tcttctgttt cctgctgcag gagagctctt gctgcaatgg 601 cggcaatggt ggcagcaaac cgaaacccca acccaaggag aagaagtcga agaaagccaa 661 aaatgccgat ccggccgatt cgaaggatgc gaagggctct aaggactcgg gcaaggcagc 721 caagggcgcc gcatatcagg aagcacccgt ggatgccgag gtggccgtca ccccaaagaa 781 tgtgcgcaag cgcaagacaa cccatagtga cctgacgcac ggtagctttt ttctgcgcgt 841 aggagccatt gctttcggat tgggcgccat gatttatatt ggcctggagt ttggatcgtt 901 cttcgaaata cccttcgatt cgccatgcca tcacattctg atcggcgtaa acccactgct 961 ccaaatgata ttcaccttca tgcagatgta tttcatattc atgaatgccc ggactaggcc 1021 gccatttcag ctgaacatcc accgcttcaa ggtgatcgcc cgctttggcc tgatgcacgt 1081 ggtggccacc aacatatgcg tgtggattcg cacgctggtc aaggaatcgc tgctcgagat 1141 tacgatctat caccagaaga acgaaccgga ggcgggagcc tcctccattg cccattcgat 1201 acggcagcat gccctgcgtc atgctggcac tgtgctgaga actcatgcgg gacccaatag 1261 cgagttcgag gttctcgacg gcgaggacat tctgcccaag gatgtgtaca aaagcgacaa 1321 tgtgctgtcg aagctggttc gcaatacagt ggatggtatt tccaagagtc tgggaatggg 1381 tggtgatcta accagcacta gtagcaccac ctcgacgacg acgagggctc cgtttaccac 1441 tccgaactac caatggcaca gcactactat ggcccgcaag ttgaagaagt ttatcaccag 1501 cgccaccaca gcggcgacca cggcggcggg cggcagtggc accaccacca ccagtagcac 1561 caccatctca ccttcgacca ccaccagtac cattgaccca tcatcgagca ccaccaccac 1621 caccaccacc ttcagtccat ttagcaccac cactgccacg aataataatc tcgagaccag 1681 cagcggcctg cagcgccttc tatcatccag cgctaatccg ccgagcctgg cgccagtcga 1741 tgggttcggt tccgctgtta cgcctacttc cgtttccggt tcgggatcct ttatggattc 1801 cttcctgtcc agcaccttga gcccggcaag cagcaccgaa ggctcggcca gcataatgaa 1861 caacctgttc ggccagcagg gacccatgga gaatagcttc caaacgtatt cggatctggg 1921 ccacgaagag gtcaccgggc tggttagctt cgagaatttg gagagcctgg acaatatcta 1981 cccggcggcc ctgtcctcca atatcggcac actcaactcc accgcctgcg gaaggatcga 2041 tataatgggc accattgtct acgattcggc gccgtatctg tatccattta ttatcgaata 2101 ctcgctgatc ggggcggtgg ttttgtatgt catgtggaag catatcggtc gctatcccgg 2161 caggatgaac gatgaggact tggagcaccg gctggaggtg atgctatcgc gcagggcggt 2221 ggccatggcg cagcagcagc gatccggacg cgttgactgc gtcggctcgt cgaagggcct 2281 gttctttggg ctcctgctgc tggtcggagc gctcatctgc ctgatactct tcttcgtctt 2341 ggtgcgccat cagcagttct cgctgttggc catttacctc gccgacgcca gccactgcat 2401 tctgatggcc tttgccatac tggccattat agttggattt atcagggtca agaacctgaa 2461 gttccgctgc gaggagcagt cgaacctgaa cgacatattg ctgcgcatat cggcctttgg 2521 cctgttcacc tactcggtgt tcagcatcat cgccggcagc ctgaaggtcc tggagagcga 2581 gccgagcctg ctggtgacga ccaccggggg cgtggccgtc ttccaggtga tcctgcagct 2641 gctcttcatc gccgatgtgt cccgccgccg cgtccacctg ccggagcacg atcgcagcaa 2701 gccgggccgc cagatagtca ccttccttct catctgcaac gtggccatgt tcgccatcta 2761 cacattcgaa gctcaaaaag tattcgccaa tcctgtaagt agatatgttc agctggagtt 2821 ctacggcttt gtgccctggt cgatcatcca gcgcatcaca ctgcccctgt gcatattcca 2881 tcgattccac agcgccgtga cactcgccga gatctggaag accacctaca aggcacgcct 2941 ggagtaagat gtctatatag gccgatgtgg gagttatgaa aaaatgcacc aaaccaaaat 3001 gtagcgagcc cagaacgcaa atagaaatca agtgaagagt tagtttctaa ttacgtatta 3061 aaaacatata tgcgtactac atataatata catattatac attaatgcag atatgattat 3121 tatttttttg tttgacaacc aaagcaaagc gaaacgaaat gagaaacgaa acgaacgaac 3181 cgatttgttg attttgccct gctttccttt tttactttgt taactcgtgg aggacttaag 3241 aacttaagaa ctaagtcata gcgtttacag tttacccgaa ggaaaaccac ggcacacgtt 3301 tttaatctga gttacgtatt taattttagt tttagtttag tttaacacac tgcaatatct 3361 tgttactaaa tcgatgaatt caaattaata ttaatttctt aattgtttaa cccttatccg 3421 cttcggcaga aacagaaacc aaaaagaaat cgattaaaaa attcacataa caaataagat 3481 tgaaattact ataaaccaaa aaacaaaaaa ggttgtttac ttttcgcgta ttttttcgcg 3541 actgtgaaaa gtcaagaatc ccgggaaaag cgaacatgaa tgaacacgaa ctaaaacaca 3601 aaacagggac acaaaaagca atgccatgaa gaacgcggcc acaggaaacg gaaacgaaag 3661 gactttctta ataaatttga tctgactttt ccgcaaaaca accaataaac agtaacagcc 3721 gaaacaacaa caaactgtga tgaatttatt tgatttactg gtattattta attttatttc 3781 cgttttgttc tctcgacttg atttaatcac ttaacctctt ttgttatttt attctcagct 3841 tcacacttca ctcactgagt cgacgcaact tttgtaagaa tttagaaaca atggcgataa 3901 gacaacttca tggccaattg taaaaacaaa ttccccgaaa caccataaaa gaaaaacata 3961 aaatacgaca aaaaaaatca agagaaaact aagaaaattg tggcatttaa tggccaaaaa 4021 tacaaaaaaa aaaaaaaaca aacaattttt aatatacatt atataaaagt ttataaatgt 4081 ccattttttg attattagta gtgatgttaa aaaaaaacat aattaacgta aacataataa 4141 tatatgtatg tatgttatag caaagaatcg gataaaccaa gacattctta agctacactc 4201 gaagaaagaa atcagagaac ttgtgaacca aacgaacaaa atctttccaa gtgaatcccc 4261 gcatttatga atgaacattt ttagataaag cgaaatggag aaatcaagtg gagtgacagg 4321 aagagaaggg agaaaccatt gacaagcatc aatttgttta cagcaatgtt aaaaaaaaaa 4381 aacgaaacga acattttgaa agatatatat gccacgtata tctataaata tatgtatact 4441 aacccaccaa attcaaagta tttcaacgtt ttatacaagg agacgatgcg caagacaaga 4501 gatcggggca gctaacgacc tgtcccactc ggatcccgaa tcccgaaccc aagttcctct 4561 acccctatta acccgaaaat caaaaacctc atcccaatta cagctgcaat ctaagtcaga 4621 aagcatcagt ttgccaaaga ccaaagaaga taaagacaaa gacgttaccg aaaggcgata 4681 aatcgataaa ttgcgaatcc gattataatc tgtaatcata atccagtctt caagtctaca 4741 tatatataat gcatgttaac tgtagacgct ggttcaagca gttcaagaag aatacgtata 4801 caatactcgt aatccaatca aatgtaatgt ggtagcaaaa gcataggtaa gccaagtcga 4861 aaaatcgaac aaaccattaa agtagctcag cacacacaca ctcagtcact cacacgatcg 4921 atcactcatg gatctgggta ttcagtattc agtatcgagt attcagtatt cagtattcgg 4981 tgaatcatat atccaaacgt ttgcgaatta aattcagttt gaaacttgta cttgcgtagg 5041 ctcttagaca ttttacttga atgcatacgc ttcataagtc acatacatac atatatatat 5101 atatatttaa ctatacatat atatatataa atataaattt aaaaaagaat tgtttttttc 5161 cttaacattt agttaaacgt aagattgaat catattttac gccgtacaac cgaacagaaa 5221 aaaagtgagc agaaagaaat atttattaaa tgtttcaact aagttgtata attataagtg 5281 agaatttaca taatggaatt atgtatctgt atctaagcca gacaaaaaaa aaacaaaaaa 5341 cactgaaaac atttttggga aagcggcgaa agtaaaaaag agttgggaat tcgaattcga 5401 ttaacgttaa aatattcaga cagaaactta acgcacaaga acaaaagaga tcaacaccaa 5461 aagcagctgc taaatcccaa gaaaacagaa aaccaaatac aacatgaaca atttatatgc 5521 tcgtaagtat atagacaatt tcaataactg ataaaaatat atatacaaga aaaaaagcga 5581 aatttacatg caattcaaat acattttcca taaccgcatc aactaaacaa caattacaaa 5641 cgaattaaag tggatgaaaa cgattcgagg aatgaatatt ataaattatg gatgtgcgaa 5701 cgaaaacgcc acaaaaacca aaaattgtaa gccatttttt aatcattgtc gcatttaaga 5761 tatgataaac gagaacgaaa tacaaaattc aaaaatttct cagttctaaa aacacacgtt 5821 cagaatcaca ctgacattcg ctcaatacat tgagttcatt gcataacgaa tacaaaaatt 5881 gacatacata caacataaaa atgaagtaaa caaaacattt gatggtaaac gaacgtacag 5941 atgacataca agtaatttta aattgaataa aaactagtat taaatatgta caacaaaaaa