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LOCUS XM_070218863 6651 bp mRNA linear INV 09-DEC-2024 transcript variant X8, mRNA. ACCESSION XM_070218863 VERSION XM_070218863.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6651 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6651 /gene="OtopLa" /note="Otopetrin-like a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058416" CDS 812..3598 /gene="OtopLa" /codon_start=1 /product="proton channel OtopLc isoform X6" /protein_id="XP_070074964.1" /db_xref="GeneID:108058416" /translation="MQRCPYIHEMRERLLDQPRETLQLENMERANLLDNRQSASESNQ LQGDGYHTSPAHQRTPLVPHDLGEDFNLDFDDDFPIDARRPKNAKTSLFIVTSLVYAI LLIVVCIAYVISDVTTHRLPVLYYETFFTYLYGVSILFLLYVFCFLLQESSCCNGGNG GSKPKPQPKEKKSKKAKNADPADSKDAKGSKDSGKAAKGAAYQEAPVDAEVAVTPKNV RKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHILIGVNPL LQMIFTFMQMYFIFMNARLNIHRFKVIARFGLMHVVATNICVWIRTLVKESLLEITIY HQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGEDILPKDVYKSDNV LSKLVRNTVDGISKSLGMGGDLTSTSSTTSTTTRAPFTTPNYQWHSTTMARKLKKFIT SATTAATTAAGGSGTTTTSSTTISPSTTTSTIDPSSSTTTTTTTFSPFSTTTATNNNL ETSSGLQRLLSSSANPPSLAPVDGFGSAVTPTSVSGSGSFMDSFLSSTLSPASSTEGS ASIMNNLFGQQGPMENSFQTYSDLGHEEVTGLVSFENLESLDNIYPAALSSNIGTLNS TACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDEDLEHRL EVMLSRRAVAMAQQQRSGRVDCVGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLL AIYLADASHCILMAFAILAIIVGFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVF SIIAGSLKVLESEPSLLVTTTGGVAVFQVILQLLFIADVSRRRVHLPEHDRSKPGRQI VTFLLICNVAMFAIYTFEAQKVFANPVQLEFYGFVPWSIIQRITLPLCIFHRFHSAVT LAEIWKTTYKARLE" misc_feature 1511..>1954 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" misc_feature <2639..3538 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" polyA_site 6651 /gene="OtopLa" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgaacttttg cgagtgatgg aagacaagtt gtctcttctc agaccgtgag agacaaaagt 61 gctgggaaat aactaaaaat taaatcagca aaactaccga ataacgaata aaaacagaaa 121 gtgcgtcgtc gtccattttg tgtgtgttgt gcgtgtgtgc gtgtgtccat gtccttttgt 181 atttcgtatt ttggcccaca acgcaggaca ataatagcct aaatcaaccc gaaacaaaac 241 cgaaataata aaacaaaaac gcgcgcaaaa ccacgacccc ctctccacgc caaaacatct 301 tgttcttctt ctcgagcgga agcaaaacaa aaacaacagg acaacgccaa aagaaagtag 361 aaaagagaag cgaaatagaa agaagcaaga ggaagcgacc ccaaaagcac acacatatga 421 tctgaacggc aggatataac cccaaaaaaa acgaccaatc tgcgcaacca aaagtcttaa 481 accttcaact gctgctgcaa accgtatgac tgatttatca agttgagcaa accgtagcga 541 ttacctccct aagtacttta tactagctta caagcataaa catagtatat aaacccgcat 601 ttacggccgg atatatatta cgaatggcaa ggcaatagat ccaaatatat gtattggatt 661 gattatatcg taaaaagcta gaactgctgc attttgaaac tcccgtagat agtgtctaca 721 ctttagcata tatacatata tatttatctg atagataggg aagagcagag gagcagagaa 781 gggtcggaag agagagagag aggagcaagg aatgcagcgg tgtccctaca ttcatgagat 841 gcgcgaaaga ttactggacc agccacggga gacacttcaa ctggagaaca tggagcgggc 901 caatctgctc gacaaccgcc aatcggcatc cgaatccaac cagctgcagg gcgatggcta 961 tcacacgagt cctgcacacc agcgcactcc actagtgcct cacgatctcg gcgaggactt 1021 caatttggat ttcgacgatg actttccgat cgacgcccga cgaccgaaaa atgccaagac 1081 atcgctgttc atcgtgacca gtctggtgta cgcgatccta ctgatcgtcg tctgcattgc 1141 atacgtaatc agcgatgtaa ccacccaccg actgccggtt ctctactacg agacattctt 1201 cacatatctc tacggcgtca gcatactctt cctcctttac gtcttctgtt tcctgctgca 1261 ggagagctct tgctgcaatg gcggcaatgg tggcagcaaa ccgaaacccc aacccaagga 1321 gaagaagtcg aagaaagcca aaaatgccga tccggccgat tcgaaggatg cgaagggctc 1381 taaggactcg ggcaaggcag ccaagggcgc cgcatatcag gaagcacccg tggatgccga 1441 ggtggccgtc accccaaaga atgtgcgcaa gcgcaagaca acccatagtg acctgacgca 1501 cggtagcttt tttctgcgcg taggagccat tgctttcgga ttgggcgcca tgatttatat 1561 tggcctggag tttggatcgt tcttcgaaat acccttcgat tcgccatgcc atcacattct 1621 gatcggcgta aacccactgc tccaaatgat attcaccttc atgcagatgt atttcatatt 1681 catgaatgcc cggctgaaca tccaccgctt caaggtgatc gcccgctttg gcctgatgca 1741 cgtggtggcc accaacatat gcgtgtggat tcgcacgctg gtcaaggaat cgctgctcga 1801 gattacgatc tatcaccaga agaacgaacc ggaggcggga gcctcctcca ttgcccattc 1861 gatacggcag catgccctgc gtcatgctgg cactgtgctg agaactcatg cgggacccaa 1921 tagcgagttc gaggttctcg acggcgagga cattctgccc aaggatgtgt acaaaagcga 1981 caatgtgctg tcgaagctgg ttcgcaatac agtggatggt atttccaaga gtctgggaat 2041 gggtggtgat ctaaccagca ctagtagcac cacctcgacg acgacgaggg ctccgtttac 2101 cactccgaac taccaatggc acagcactac tatggcccgc aagttgaaga agtttatcac 2161 cagcgccacc acagcggcga ccacggcggc gggcggcagt ggcaccacca ccaccagtag 2221 caccaccatc tcaccttcga ccaccaccag taccattgac ccatcatcga gcaccaccac 2281 caccaccacc accttcagtc catttagcac caccactgcc acgaataata atctcgagac 2341 cagcagcggc ctgcagcgcc ttctatcatc cagcgctaat ccgccgagcc tggcgccagt 2401 cgatgggttc ggttccgctg ttacgcctac ttccgtttcc ggttcgggat cctttatgga 2461 ttccttcctg tccagcacct tgagcccggc aagcagcacc gaaggctcgg ccagcataat 2521 gaacaacctg ttcggccagc agggacccat ggagaatagc ttccaaacgt attcggatct 2581 gggccacgaa gaggtcaccg ggctggttag cttcgagaat ttggagagcc tggacaatat 2641 ctacccggcg gccctgtcct ccaatatcgg cacactcaac tccaccgcct gcggaaggat 2701 cgatataatg ggcaccattg tctacgattc ggcgccgtat ctgtatccat ttattatcga 2761 atactcgctg atcggggcgg tggttttgta tgtcatgtgg aagcatatcg gtcgctatcc 2821 cggcaggatg aacgatgagg acttggagca ccggctggag gtgatgctat cgcgcagggc 2881 ggtggccatg gcgcagcagc agcgatccgg acgcgttgac tgcgtcggct cgtcgaaggg 2941 cctgttcttt gggctcctgc tgctggtcgg agcgctcatc tgcctgatac tcttcttcgt 3001 cttggtgcgc catcagcagt tctcgctgtt ggccatttac ctcgccgacg ccagccactg 3061 cattctgatg gcctttgcca tactggccat tatagttgga tttatcaggg tcaagaacct 3121 gaagttccgc tgcgaggagc agtcgaacct gaacgacata ttgctgcgca tatcggcctt 3181 tggcctgttc acctactcgg tgttcagcat catcgccggc agcctgaagg tcctggagag 3241 cgagccgagc ctgctggtga cgaccaccgg gggcgtggcc gtcttccagg tgatcctgca 3301 gctgctcttc atcgccgatg tgtcccgccg ccgcgtccac ctgccggagc acgatcgcag 3361 caagccgggc cgccagatag tcaccttcct tctcatctgc aacgtggcca tgttcgccat 3421 ctacacattc gaagctcaaa aagtattcgc caatcctgtt cagctggagt tctacggctt 3481 tgtgccctgg tcgatcatcc agcgcatcac actgcccctg tgcatattcc atcgattcca 3541 cagcgccgtg acactcgccg agatctggaa gaccacctac aaggcacgcc tggagtaaga 3601 tgtctatata ggccgatgtg ggagttatga aaaaatgcac caaaccaaaa tgtagcgagc 3661 ccagaacgca aatagaaatc aagtgaagag ttagtttcta attacgtatt aaaaacatat 3721 atgcgtacta catataatat acatattata cattaatgca gatatgatta ttattttttt 3781 gtttgacaac caaagcaaag cgaaacgaaa tgagaaacga aacgaacgaa ccgatttgtt 3841 gattttgccc tgctttcctt ttttactttg ttaactcgtg gaggacttaa gaacttaaga 3901 actaagtcat agcgtttaca gtttacccga aggaaaacca cggcacacgt ttttaatctg 3961 agttacgtat ttaattttag ttttagttta gtttaacaca ctgcaatatc ttgttactaa 4021 atcgatgaat tcaaattaat attaatttct taattgttta acccttatcc gcttcggcag 4081 aaacagaaac caaaaagaaa tcgattaaaa aattcacata acaaataaga ttgaaattac 4141 tataaaccaa aaaacaaaaa aggttgttta cttttcgcgt attttttcgc gactgtgaaa 4201 agtcaagaat cccgggaaaa gcgaacatga atgaacacga actaaaacac aaaacaggga 4261 cacaaaaagc aatgccatga agaacgcggc cacaggaaac ggaaacgaaa ggactttctt 4321 aataaatttg atctgacttt tccgcaaaac aaccaataaa cagtaacagc cgaaacaaca 4381 acaaactgtg atgaatttat ttgatttact ggtattattt aattttattt ccgttttgtt 4441 ctctcgactt gatttaatca cttaacctct tttgttattt tattctcagc ttcacacttc 4501 actcactgag tcgacgcaac ttttgtaaga atttagaaac aatggcgata agacaacttc 4561 atggccaatt gtaaaaacaa attccccgaa acaccataaa agaaaaacat aaaatacgac 4621 aaaaaaaatc aagagaaaac taagaaaatt gtggcattta atggccaaaa atacaaaaaa 4681 aaaaaaaaac aaacaatttt taatatacat tatataaaag tttataaatg tccatttttt 4741 gattattagt agtgatgtta aaaaaaaaca taattaacgt aaacataata atatatgtat 4801 gtatgttata gcaaagaatc ggataaacca agacattctt aagctacact cgaagaaaga 4861 aatcagagaa cttgtgaacc aaacgaacaa aatctttcca agtgaatccc cgcatttatg 4921 aatgaacatt tttagataaa gcgaaatgga gaaatcaagt ggagtgacag gaagagaagg 4981 gagaaaccat tgacaagcat caatttgttt acagcaatgt taaaaaaaaa aaacgaaacg 5041 aacattttga aagatatata tgccacgtat atctataaat atatgtatac taacccacca 5101 aattcaaagt atttcaacgt tttatacaag gagacgatgc gcaagacaag agatcggggc 5161 agctaacgac ctgtcccact cggatcccga atcccgaacc caagttcctc tacccctatt 5221 aacccgaaaa tcaaaaacct catcccaatt acagctgcaa tctaagtcag aaagcatcag 5281 tttgccaaag accaaagaag ataaagacaa agacgttacc gaaaggcgat aaatcgataa 5341 attgcgaatc cgattataat ctgtaatcat aatccagtct tcaagtctac atatatataa 5401 tgcatgttaa ctgtagacgc tggttcaagc agttcaagaa gaatacgtat acaatactcg 5461 taatccaatc aaatgtaatg tggtagcaaa agcataggta agccaagtcg aaaaatcgaa 5521 caaaccatta aagtagctca gcacacacac actcagtcac tcacacgatc gatcactcat 5581 ggatctgggt attcagtatt cagtatcgag tattcagtat tcagtattcg gtgaatcata 5641 tatccaaacg tttgcgaatt aaattcagtt tgaaacttgt acttgcgtag gctcttagac 5701 attttacttg aatgcatacg cttcataagt cacatacata catatatata tatatattta 5761 actatacata tatatatata aatataaatt taaaaaagaa ttgttttttt ccttaacatt 5821 tagttaaacg taagattgaa tcatatttta cgccgtacaa ccgaacagaa aaaaagtgag 5881 cagaaagaaa tatttattaa atgtttcaac taagttgtat aattataagt gagaatttac 5941 ataatggaat tatgtatctg tatctaagcc agacaaaaaa aaaacaaaaa acactgaaaa 6001 catttttggg aaagcggcga aagtaaaaaa gagttgggaa ttcgaattcg attaacgtta 6061 aaatattcag acagaaactt aacgcacaag aacaaaagag atcaacacca aaagcagctg 6121 ctaaatccca agaaaacaga aaaccaaata caacatgaac aatttatatg ctcgtaagta 6181 tatagacaat ttcaataact gataaaaata tatatacaag aaaaaaagcg aaatttacat 6241 gcaattcaaa tacattttcc ataaccgcat caactaaaca acaattacaa acgaattaaa 6301 gtggatgaaa acgattcgag gaatgaatat tataaattat ggatgtgcga acgaaaacgc 6361 cacaaaaacc aaaaattgta agccattttt taatcattgt cgcatttaag atatgataaa 6421 cgagaacgaa atacaaaatt caaaaatttc tcagttctaa aaacacacgt tcagaatcac 6481 actgacattc gctcaataca ttgagttcat tgcataacga atacaaaaat tgacatacat 6541 acaacataaa aatgaagtaa acaaaacatt tgatggtaaa cgaacgtaca gatgacatac 6601 aagtaatttt aaattgaata aaaactagta ttaaatatgt acaacaaaaa a