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PREDICTED: Drosophila takahashii eukaryotic translation initiation


LOCUS       XM_070218856            1973 bp    mRNA    linear   INV 09-DEC-2024
            factor 4E7 (eIF4E7), transcript variant X1, mRNA.
ACCESSION   XM_070218856
VERSION     XM_070218856.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1973
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1973
                     /gene="eIF4E7"
                     /note="eukaryotic translation initiation factor 4E7;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins"
                     /db_xref="GeneID:108054939"
     CDS             170..1675
                     /gene="eIF4E7"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 4E1"
                     /protein_id="XP_070074957.1"
                     /db_xref="GeneID:108054939"
                     /translation="MFPNNFYKMKNFANPKSMFKSSSGSTNDDSSSSLQKVAASSSQQ
                     TTTAAVVAQTQPAKNQEPGKNAPKKAVTPATQDTPKQGKNKNKKGKKNQKTVPPPRNP
                     SQVSKDSSSLNLKKNQTKEVATKKVQEKPKEKVLPEQKKVQEKPKEKVLPEQKKVQDK
                     QKSLPEKKNVQDKKNVQDKKNVPEKKNNGQDKLTPEQKLLELKIQKKLSEQKLLDRML
                     EPKIYQNTYPDQKQIEKKIQKKLSEQKILDKMLEPEIYAKAVSQPLEPQAPQDVQKDA
                     VEVPQEEHNEPPASDLSEGNDNLVTIEAEEDTIDSQETEEPDEGPQHPLNNRWTLWYL
                     ENDRTKTWEEMLHEVTSFETVENFWSLVTHIKPPSDLKIGSDYCLFKKGIRPMWEDEA
                     NCRGGRWVISLSKTAKTDLDNFWMDSMLCLIGEACENSVELCGVVVNIRGKNNKISVW
                     TADGGKEEAVLEIGRKLREGLHMDSAYSLQYQLHKDTMVKQGSTVKSIYTL"
     misc_feature    <353..>655
                     /gene="eIF4E7"
                     /note="cell division protein DedD; Provisional; Region:
                     PRK11633"
                     /db_xref="CDD:236940"
     misc_feature    <509..>805
                     /gene="eIF4E7"
                     /note="MAEBL; Provisional; Region: PTZ00121"
                     /db_xref="CDD:173412"
     misc_feature    1139..1612
                     /gene="eIF4E7"
                     /note="Eukaryotic initiation factor 4E; Region: IF4E;
                     pfam01652"
                     /db_xref="CDD:460281"
     polyA_site      1973
                     /gene="eIF4E7"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcttagaaat aatcaacagt ttggaacgat ttcgtactca gacaaaaatt gtgtttgatt
       61 caaattttgt acaacaactt ttaagttttt ctttggtgcc caataaattt aattctctta
      121 agcgatatat gcgaaaaagt gcagtgcgtt gaatcttccc caagccgcca tgtttcccaa
      181 caatttttac aagatgaaga actttgccaa tccgaaatcg atgttcaaga gcagcagcgg
      241 cagcaccaac gatgattcct cgtcgtccct ccagaaggtg gcagcttcat cttctcaaca
      301 aaccaccacc gctgcagtgg tggcccaaac tcaaccggcg aagaaccagg aaccggggaa
      361 gaatgccccc aagaaggcag tgactccagc gactcaagat accccaaagc aggggaagaa
      421 caagaacaag aagggcaaga agaatcagaa gactgtgccg cctcctcgta atcctagcca
      481 ggtgagcaag gattcctctt cattgaatct aaaaaagaat cagacaaagg aggtggcgac
      541 aaagaaggtg caggagaaac ccaaagagaa ggtccttccc gagcaaaaga aagtgcagga
      601 gaaacccaaa gagaaggtcc ttcccgagca aaagaaagtg caggataagc agaaaagtct
      661 accggaaaag aagaatgttc aagacaagaa gaatgttcaa gacaagaaga atgtgccgga
      721 gaagaagaac aatgggcagg ataagttgac gccagagcaa aagctcttgg agctaaaaat
      781 ccagaagaag ctatcggagc aaaagctgct tgacaggatg ctagagccca agatctatca
      841 gaacacttat ccagaccaaa agcagattga gaagaagatc cagaagaagc tatcggagca
      901 gaaaattctc gataagatgc tggagcccga gatttatgca aaggccgttt ctcaacctct
      961 ggaacctcag gcacctcagg atgtccagaa ggatgcagtt gaagtgccac aggaggagca
     1021 caatgagcca ccagccagcg atctcagcga ggggaatgac aatcttgtga ccatcgaggc
     1081 ggaggaggat accatcgata gtcaggagac cgaagagccc gatgagggac cgcaacatcc
     1141 tttgaacaac cgctggacgc tgtggtatct ggagaacgat cgcaccaaga cctgggagga
     1201 aatgctgcac gaggtgacga gcttcgaaac cgtggagaac ttttggtctc tcgtgaccca
     1261 cataaagccg ccatcggatc tgaaaattgg cagtgactat tgcctgttta agaagggaat
     1321 tcgaccgatg tgggaggacg aggccaattg ccgtggcggc cgttgggtca tcagtttgag
     1381 caagaccgcc aagacggatc tcgataactt ttggatggac tcgatgctct gcctgatcgg
     1441 cgaggcctgt gagaattcgg tcgaactgtg cggcgtcgtg gtgaatattc gcggcaagaa
     1501 taacaagatc tctgtgtgga ccgccgacgg cgggaaggag gaggctgtcc tcgagattgg
     1561 acgcaagttg cgcgagggcc tgcacatgga tagcgcctat tcgctgcagt atcagctgca
     1621 caaggacacc atggtcaagc agggatccac tgtcaaatcg atatataccc tgtaattaga
     1681 agaagacgta acctgtaacc catatcaaaa atcaaatagg gcatcatcac acagcccctt
     1741 ttagttattt tcggtatttt ttcacctagc agataaccac aacccagccc aacccaacca
     1801 ttcgttcgag catcacccaa atcatccatt gtccatcgtt cagatgtcaa tcggatgcca
     1861 aaatctgcag tcaagtcttc tcctcttgta catgttgtac atgtaaattt taacgttgct
     1921 cttgcggagc caagaaataa atatataacc ttatgagtgt ttagccctaa caa