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LOCUS XM_070218853 5755 bp mRNA linear INV 09-DEC-2024 X1, mRNA. ACCESSION XM_070218853 VERSION XM_070218853.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5755 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5755 /gene="rsh" /note="radish; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068229" CDS 936..5639 /gene="rsh" /codon_start=1 /product="uncharacterized protein rsh isoform X1" /protein_id="XP_070074954.1" /db_xref="GeneID:108068229" /translation="MSKLRHYRSMDQPCSSTCVVIRKKTMTAICFVCNLPIMSHQVGL VWQGGNGWDDLVREQLEESTIRQRLGGRRDSAAQITTPPSTSPPPGLQRRRRSSLAQL TDILREWSGGTTKQQQHHQQQQQQQLAQQASRSKAQLNRRETLADLARSLPWRTSTTT DASTGAGGGGSGGGACTTYMAPRKRRESSADSGIRSMRSRRDSNTAEFVRHWNRRESG AVEEQPSSCVAVPVVVECSKSASRRGSGESYLSGSRRDSNVAGRVTTPPPPGKYQMAK KRDSLAAPEFPNFRQEQRPSTSSAGSCSDHSMPLISTHSSTSTHHLATHSQQVDSACQ ALPPPTIITSSVTPPATSPTAPKGRRDSQTQCGRVNRRDSKAGVSPERAPRLQRLQRQ ATAFDEGCLPGGGGGGSRRGSQPALSPDPPDDCGERRTSRRDSLSPDSASRGGRRDSR THLSPDRSHERDGSPRRHTLRRQSSSAARSPRSPDSNSCCSSRDPSPCSRPQTQTTVE QNQRPAIRRQSTTEEILIARGFRRQSTTEEMIRCRNFRRQSSQSDDVCRYRGRRDSSA QIIDGTIGTMTVETTSTFFDSSTQTEPSPLYDNNHYHEECLRCNSCGLNLTGPNQKRA RRFKNQILCDLHFADVALMECSDFMQQLRSFKPQSLGCAVARRKSSTTLIFPLPPQAC SDEFCEEYPHNLMPTPGYWIECSRQKITMPTPHTIWDESDSEHEDIRAGSASDAYLER ECSDLYEDDEDSEATPSPRKKTTIEEQWDQQGAFELISVEQETYEKYFYGTEHWNYFT SDEDLGPVILSIKQETLNGRDQFRILVRAGSYTVHGLIPASCVFADRYNREEVVRSLG KEVNLNPPLTLGQLPDTPEELLKLDQVFIKSELKVGVIFVKEDQYTEEQILDNNENSP LFDEFLTLLGDRVRLRGFDKYKGGLDTVHDLTGLFSVYTNWRNIEIMFHVSTLLPYEK HDPQKLQRKRHIGNDIVCVVFLEADNTRFSPACIKSHFLHTFILVRVSARIKHKPTRY EVSVVTRDEVGAYKPYLWEQSVFEKGPMFREWLLTKIVNGERASYSAPKFARMQERTR SQMLEDLVMNLSNHAETGQIPKPYRRGSWRPIGHMRPSSPLLDSVRDQFEDYDQLAKD FTRVFLNEEPSCLTNAHLFDVVFLVGQSKQKARFIGVRAILGVRSRVFQEMLYGIQTG FGSPQIPVAEIFARPAPSLVSPQNQKPKSNNYLTVPDSDSIRPKSVPSSPMVKRAFSR LGTITAGWGRSIRNKNTNQLNPDDKKKWISSTDCSNRDSKDKDKDKPGNNQLAVPRLS VCADAQKVDRAKLAQTEFNIIEFDPDTFRVLLDYLHTGTCPLTCVSIPGLLCAAEHYD LPELLQACFHHCKQFLRIEVVCPMLISLENYYWRYTSASELVNMILSFVESKAHSLFK CPEFLHLSESMVQMIMCRELQTPEIRKFEAMLAWAQHKVGKLKNHPNKDTQFEFECIM ERLTRDLNLCRISPSELLTVVLPSKSMKNERIMETLMVQVNLGTYRMPELDAYRQQLR QQESAEATVQVHRGG" misc_feature <2724..2846 /gene="rsh" /note="LIM is a small protein-protein interaction domain, containing two zinc fingers; Region: LIM; cd08368" /db_xref="CDD:259829" misc_feature 3654..4199 /gene="rsh" /note="Rap/ran-GAP; Region: Rap_GAP; pfam02145" /db_xref="CDD:460463" misc_feature 4404..>4571 /gene="rsh" /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily; Region: BTB_POZ; cl38908" /db_xref="CDD:453885" misc_feature <4938..5117 /gene="rsh" /note="Broad-Complex, Tramtrack and Bric a brac; Region: BTB; smart00225" /db_xref="CDD:197585" misc_feature 5130..5348 /gene="rsh" /note="BACK (BTB and C-terminal Kelch) domain; Region: BACK; cl28903" /db_xref="CDD:475122" ORIGIN 1 ccaagccaaa aggttgtgcg cctcgcaaca gcaacagcag caacaggagc aacatcaaca 61 ggagcaacag caacaggagc aacagcaaca tcaacagcag cagcatcaac agctcaacag 121 ttcaacattc acagaagcaa ttagcaaacg tgcaacaagt cacagacaat acgctcttat 181 ttttttcaaa gtgccaaata ttaagtgtgt ttttgtgtta atattttaca tgacatgtac 241 aagagtatat aaatatatat atatttttgt ttgtcgcgaa ccgaaagcaa tgcaatagtt 301 agcccgatag ttagcacccc catcgaatca ctcccactac ctgaaagcag aagcagccac 361 ggaagtacaa caaatcagag accatactta tacctgatct actcaccaaa taccaaatac 421 cgaatataca catttaatca ttactccgag gacctgacaa gcaacagatg ctttaaccat 481 tgatcaaaga aacaatagca ggaagaaaag agacgagaag cgagggaaac cgcagattta 541 aatgccaaaa ccgagggaaa agaaaccata agccgaaaaa ggtaaccaaa accgaggaaa 601 ccaagctcaa acgaggcggc agccagttaa gaagacaaat tcagcattgt atctctgtgt 661 ctctgtgtgt gtagcaaacc aatcagaacc ccaaaaaccc cacccaaaag ccccaaataa 721 aaccaaacaa tacagatacc taatcaccgc actttcggca agccgaaaaa ccgcattatt 781 agaaccgcat tgaatcgaac tcgaaagacg gcgacggcca agaagggaag gatataggcg 841 actaaagagg aaggccgccg gagcggcagg agccgaagga taacgctcac tttcgaggat 901 cggcgggcgc tgccacagaa accagaacat gcgccatgtc aaaactgcgg cattaccggt 961 ccatggatca gccctgcagc agcacctgcg tggtcatacg caaaaagact atgacagcca 1021 tttgcttcgt gtgcaacctg cccatcatgt cgcaccaagt gggtttggtg tggcagggcg 1081 gcaacggctg ggacgatctt gtgcgcgaac agctggagga gtcgaccatc cggcagcggc 1141 tgggcgggcg gcgggactcg gcggcgcaga tcaccacccc gccgagcacc tcgccgccgc 1201 cgggactgca gcgccggcgg cgcagctcgc tggcccagct gacggacatc ctgcgcgagt 1261 ggagcggcgg caccaccaag cagcagcagc accaccagca gcagcagcag cagcagctgg 1321 cgcagcaggc gtcccgctcg aaggcgcagc tcaaccgccg cgagacgctg gcggacctgg 1381 cccgcagtct gccgtggcgc acctccacca ccacggacgc cagcacgggg gcagggggcg 1441 ggggctcggg tggtggcgcc tgcaccacct acatggcgcc ccgcaagcgg cgggagtcgt 1501 ccgcggactc tggcatccgg agcatgaggt cgcgccgcga ctcgaacacc gccgagttcg 1561 tgcggcactg gaatcgccgc gaaagcgggg cagttgagga gcagcccagc agctgcgtcg 1621 ccgtgcccgt cgtcgtcgag tgctctaaaa gcgcttcccg tcgcggatcc ggcgagagct 1681 acctgtccgg cagtcggcgc gatagcaacg tggccggtcg ggtgaccacg cccccgcccc 1741 cgggcaaata ccagatggcc aagaagcgcg actcgctcgc cgccccggag ttccccaact 1801 tccggcagga gcagcgcccc tccaccagtt cggcgggctc ctgctccgac cactccatgc 1861 ccctgatctc gacgcactcg agcacgagca ctcaccacct ggccacccac tcccagcagg 1921 tggactccgc ctgccaggcc ctcccgccgc cgacgatcat caccagctcc gtgacgccgc 1981 cggcgacgag tcccacggct cccaagggac gccgcgattc gcagacgcag tgcggccggg 2041 tgaatcggcg cgactcgaag gcgggcgtca gtccggagcg ggcgccacgc ctccagcggc 2101 tgcagcgcca ggcgacggcc ttcgacgagg gctgcctgcc gggaggcggc ggcggcggca 2161 gtaggcgtgg ctctcagccc gccctgagtc ccgatccgcc cgacgattgc ggcgagcggc 2221 ggacttctcg ccgggattcc ctctcgccgg acagcgcttc gcgaggcggt cgaagggatt 2281 cgaggaccca cctgtcgcca gatcgatcgc atgagcggga cggaagtccg aggaggcaca 2341 cgttgcgcag gcagagcagc tcggccgcca ggtcaccgag gtcgccggac tcgaacagct 2401 gctgctcctc gcgggatccc agtccctgct cccggccgca gacacagacg accgtcgagc 2461 agaaccagcg gccggccatc cggaggcagt cgaccaccga ggagatcctc atcgcccgcg 2521 gattccggcg acagtcgacc accgaggaga tgatccgctg ccgcaacttc cggcggcaga 2581 gctcccagag cgacgacgtt tgtcgttatc gcggcagacg cgactcctcg gcgcagataa 2641 tcgatggaac catcggcacg atgaccgtgg agacgaccag tacgtttttc gactccagca 2701 cccagacaga accatcgccg ctctatgaca acaatcacta tcatgaggag tgcctgcggt 2761 gcaattcctg cggcctgaac ttgactgggc ccaaccaaaa gagggccagg agattcaaga 2821 accagatcct gtgcgacctg catttcgcgg acgtggccct aatggagtgc tccgatttca 2881 tgcagcagct gcggagcttc aagccgcaat ccttgggctg cgcggtggcc aggcgcaaga 2941 gctccacgac gctgatattc ccgctgccac cgcaagcttg ctcagatgag ttctgcgagg 3001 agtatccgca caacctgatg cccacacctg gctactggat cgagtgctcc cgccagaaga 3061 tcaccatgcc caccccgcac accatttggg atgagagcga ctcggagcac gaggacatcc 3121 gggcgggcag tgccagcgat gcctatctgg agcgcgagtg cagcgatctc tacgaggatg 3181 acgaggactc cgaggccacg cccagtccgc gcaagaagac caccatcgag gagcagtggg 3241 accaacaggg cgccttcgag ctgatctccg tggagcagga gacgtacgaa aagtacttct 3301 acggcaccga gcactggaac tactttacca gcgacgagga cctaggtccg gtcatcctgt 3361 ccatcaagca ggagacgctc aacggacggg atcagttccg catcctggtg cgggctggat 3421 cctacacagt gcatggactg ataccggcgt cctgtgtgtt tgccgataga tataatcgcg 3481 aggaggtagt tagatcttta ggtaaagaag ttaatttaaa tccaccttta acgttaggac 3541 aattacccga tacgccagag gaattattaa agttagatca ggtttttata aaatcagagt 3601 taaaagttgg cgtcatattt gtcaaagagg atcagtatac cgaagagcaa attctggaca 3661 ataatgaaaa ttcaccgctc ttcgacgaat tcctcactct gctgggcgat cgagtccggc 3721 tgcggggatt tgataaatac aaaggtggcc ttgatacggt gcacgacctg acaggtctct 3781 tctccgtcta tacgaactgg cgcaacatcg agatcatgtt ccatgtgtcc actctgctgc 3841 cgtacgagaa gcacgatccg cagaagctcc agaggaagcg ccacatcggc aacgatatcg 3901 tctgcgtggt cttcctggag gccgataaca cccgcttcag tcccgcctgc atcaagagcc 3961 atttcctgca caccttcatc ctggttcgtg tttcggctag gatcaagcac aagccgacga 4021 gatacgaggt gtccgtggtg acgcgcgacg aggtgggcgc ctacaagccc tacctgtggg 4081 agcagtccgt cttcgagaag gggccgatgt tccgggaatg gctgctgacg aagatcgtca 4141 acggggagag ggcctcgtat tcggcaccga aattcgcacg aatgcaggag cggacgcgat 4201 cgcagatgct cgaggatctg gtgatgaatc tatcgaatca cgcggaaacc ggacagatac 4261 ccaagccata tcgacggggc agctggcggc cgatcggtca catgcgaccc tcgtcgccac 4321 ttctggactc cgttcgcgat caattcgagg actacgatca gctggccaag gactttaccc 4381 gcgtattcct aaacgaagaa ccatcgtgcc tgaccaacgc ccatctgttc gatgtcgtct 4441 tcctggtggg tcagtccaag cagaaggctc gatttatcgg agtccgagcc attcttggtg 4501 tgcggagtcg agtatttcag gaaatgctat acggcatcca gacgggcttc ggatcgccgc 4561 agattcccgt ggcggagatc ttcgcccggc cggctccctc gctggtctcc ccgcagaacc 4621 agaagcccaa gagcaacaac tacctgaccg ttcccgactc cgattccatt cggccgaaga 4681 gcgtgccctc gtcgccgatg gtgaagaggg ccttctcccg gctggggacc attacggccg 4741 gatggggacg atcgatacgg aacaagaaca ccaaccagct gaatcccgac gacaagaaga 4801 agtggatttc gtcgacagat tgttcgaaca gggacagcaa ggacaaggac aaggacaagc 4861 cgggcaacaa ccagctggcc gtgccacgcc tctccgtctg cgccgacgcc cagaaggtcg 4921 atcgcgccaa gctggcccaa acggagttca acatcatcga gttcgatccg gacacgttcc 4981 gggttctgct cgactacctg cacacgggca cctgtccgct gacctgcgtc tccataccag 5041 gcctgctgtg cgccgccgag cactacgacc tgccggagct gctgcaggcg tgcttccacc 5101 actgcaagca gttcctgcgc atcgaggtgg tctgcccgat gctcatctcg ctggagaact 5161 actactggcg ctacacatcc gcctccgagc tggtcaacat gatcctgtcg ttcgtggaga 5221 gcaaggcgca ctcgctgttc aagtgcccgg aattcctgca tctctccgaa tcgatggtcc 5281 agatgatcat gtgccgggag ctgcagacgc cggagatccg caaattcgag gcgatgctgg 5341 cgtgggcgca gcacaaggtg ggcaagctga agaaccatcc gaacaaggac acccagttcg 5401 agttcgagtg catcatggag cggctgacgc gggatctgaa cctgtgccgc atttcgccca 5461 gcgagctgct caccgtcgtc ctgccctcca agtcgatgaa gaacgaacgc atcatggaga 5521 cgctcatggt gcaggtgaat ctgggcacct accggatgcc cgagttggat gcgtaccgtc 5581 agcagttgcg ccagcaggag tccgccgagg ccaccgtcca ggtccaccgg ggtggatgag 5641 acagtaagaa tgtgagtttc gatttggagc agcagcagca gcaggagcag caatcggatt 5701 cggatgccac agtagccagt agccatcacc atctaaatca gaatcagaac caatc