Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218835 7227 bp mRNA linear INV 09-DEC-2024 variant X4, mRNA. ACCESSION XM_070218835 VERSION XM_070218835.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7227 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7227 /gene="tyf" /note="twenty-four; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108067516" CDS 525..6011 /gene="tyf" /codon_start=1 /product="pneumococcal serine-rich repeat protein isoform X1" /protein_id="XP_070074936.1" /db_xref="GeneID:108067516" /translation="MNNEQTPSSSDTSADRVGGSGSGSGSLSGTGSESAIKLPIPDTP IVSIAAGTMSESTTTTTATKTTPTPFPQEQLITMMSDHVAQLDEASVSQEAKGAVAAT NHVATKKSSSPSNSHSHATNHAAAAEAGKDSGAAAAAAGGDTFSTVFAMLNDTQGEEL SRPNRRVLQYGATAKGKTQDDQNVGKRQKKKKTKYDTWEDSDFNDLDDASLKKLLEEA YWYRNPGDRKNKSERFLQMLKKAEYDEEISYRAIKSCLTLNPSALASSAAAAAAGSSG GGSSSAGHNSGYSSTSTSTNHRSTDPGQQRHKQGGSLQDLVEAAHRSELATTSAAAAA ATAAASQRFNCDYQLSGRSNRRQQQQQQQHNQNATSSATASASKKIKNSSVSGRQREG GSLPSSVNFEPAAAMDAKQQQKQQQQEGSGSSAAGGSKNHSCSSLPSHLGDRDPEAGI QFDMDEDEATGGVAISGVPHDYLLEVSDDTLKRWDLRMDGSLWEIARALVKADLSDKA QLEPQNPSMTFLLDALSGQQPKQPKQPAEAREGGAAKEFLIDDPLHFSVLEVSARSQL QQQAHYLAALTGQFGLGLEEQKRKVEAGYVSLNDNYTACSSVYGGGAGSPAAIEGSKP STSSATSSGGSNCGGGASSSSDALSGELRPAKIGRMVAGAASTAAASMGGKATTRQLD ENGNALSDGFGGATGVATSSNGNQFTALITTTVGGSATTSSSSAAHRQNSVSTLLSTG TNTTTTAMAAAAVAASYSQLQQAPSGGAVAAGPGIGIGIQQNPTKQKAKKKSQQERNT TTVDVESVAGYRGNDPVEQLVKYIENDVNGGGGNTAAGQRKKERKKQNKLKKSNSLEE LRSCSKMEVDDLKRQSATTEMMRQKKGPNNAGPSGTSSSAAAAGGKHNSASVADINKN CNKEQQQVQVQVRNSSSNPGGTQQRKGERRSWGTEELQYLGDRQEMSAAWSEPESLAQ KPLTSLPALTRMSELDALNTVLSETAEFHVVTKKKKPKKQRAVTMDDAAVAVAAAATT GGNLQRMQQITKSASSNMMSQRMHYYTSSNNNGGGAGVATYKQQQEHYQAQQGQHHHH HHHHHHHHHHHGGSAVSNQVDGSRRKSTSSMPPSEKSDSSDLDSVHSLPIQTGKKKSL GGGGGNNKQRAAQAASQRQAKQNNSSPAPISYADIARNKQEALNQAAASDTELELKGS KSKSRPDFPELPAGNQQQQQPIVVSNQNTAPSSSSSISYSQSLNATPASSSSDAESLN SPELQVVACSLATSTSSCGSGSSSSSSSASTSSTASSSASPPALQKSKSVEHDASYSC TSSNLDQQYPALEKTVKRHSTNNVSVAVASSSASLYNFAAAAKQQLAEKAAAATTTTS TAVSVPAAPGSSSTPSPAVKLKAKPKELSPSSSSSSKKPPKEEATSSSSKATISTSTT TTTTQKTTAATQTEGAKKLSSSSCIAKGAGAVLEATAGRRAVIILNDDREAGRSNNEF IFGDFNEDELKLFDDNLEDEVQAANKQQQTEAEDEAEDADQTEVESREKESQQLNDSG AASDAVNSSASLDMLSISAETGQSSPSAASLINSSTPSGSSSASASTSTSSSSISSSS SSGSNGNGAACLASISGMLGQSVANQSGDSGIYAAANTSIKEQVNNFLSKASSSEETL PSTNSISMQQLETCNDIEAAIIAAARAAAAARSTSCSRSNSQEQEQQAKTIRSNSNTN SNPNPNPETKVALPVFMNYNDDDEEDDESLQELSFMADLKDAAATTSAEAEAQEVTVL PPPPPSRPAMMTNTELIVDYIANTWNAIANSKYVTYYNEREQET" polyA_site 7227 /gene="tyf" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcaaaacaca acaacaactc gttctcttcg gttcggaatt ttcatgtgcc tatgcaatta 61 aacgatttcg gccgcttaca gacagctgta agataataag agcagttatc agataatcga 121 gccgttcgag gggcagttaa tggacgcaga actcgagtgc gcggctgtgt gataccttct 181 tttcgattgc caaaacccaa aaaccacaaa aaaaacgccg agggacctac gtaaatgcca 241 cggccagaga ttcgagattc gcgattcgag attcccagtg acgacaggcc tgtcaagtgc 301 agcaggagtc ccgagtgata cgccataggt gggcccccct gtaactcaca gtcaggaatc 361 cgggaatcca ggaatccagg aatccaggcg gcagagcact tgcagccgcg gtggcgacca 421 cacggcggct gggcagctgg gcttcctagg aaaaccgagg agaggcaaca gttaattcga 481 gcaattcgaa tggcatttgt ttgtttccac caaacgacca aaagatgaac aatgaacaaa 541 cgccgtcatc atcggacaca tcggcggatc gtgtgggagg atctggatct ggatcaggtt 601 ctttatctgg tactggatcc gagtcagcta tcaagctgcc cattccggac acgcccatcg 661 tctcgattgc cgctgggacg atgagcgaga gcaccacgac gaccaccgcc accaagacga 721 cgccgacgcc gttcccgcag gagcagctca tcaccatgat gtcggaccat gtggcgcaac 781 ttgacgaggc ttctgttagc caggaggcca agggagcagt ggcggctacc aaccatgtag 841 caaccaagaa gtcatcatcc cccagtaata gccatagcca cgctactaac cacgctgcag 901 cggcagaagc tggcaaagat tcaggagcag cagcagcagc agcaggaggg gatacattct 961 cgaccgtctt cgccatgctg aacgatacgc aaggcgaaga gctgtcgcga ccaaaccgca 1021 gagtcctcca atacggggcc actgccaagg gcaagaccca ggacgatcag aatgtcggca 1081 agcgacagaa gaagaaaaag acaaaatacg atacctggga agatagcgat tttaatgatc 1141 tcgacgacgc atcattgaag aaacttctcg aggaggcata ttggtatcga aatcctggcg 1201 acaggaagaa caagagcgag cgatttctgc aaatgctcaa aaaggctgag tacgacgagg 1261 agatctctta tcgtgccatc aaatcctgcc tcacactcaa cccatccgca ctagcgtcca 1321 gtgcagcagc ggcggcagca ggctcgagcg gcgggggcag cagcagtgca gggcacaaca 1381 gcggctacag ctccacctcc acctccacca atcaccggtc gacggatccc ggccagcagc 1441 ggcacaagca gggcggctcc ctgcaggatc tcgtcgaggc ggcgcaccgc agtgagctgg 1501 ccaccacctc ggcggcggcg gctgcagcga cggcggcggc aagccaacgt ttcaactgtg 1561 attaccagct gagtggccgc tccaatcgcc gccagcagca gcagcagcag cagcacaacc 1621 aaaacgccac ctcctccgca actgcatccg catctaagaa gatcaagaac tcatccgtct 1681 cgggccggca gcgcgaagga ggcagcctgc ccagcagcgt taactttgag ccggcagctg 1741 ccatggatgc caagcagcag cagaagcagc agcagcagga gggatccgga tcatcggcag 1801 caggtggcag caagaaccac agctgcagca gcctgcccag ccatctgggc gatcgggatc 1861 ccgaggcggg catccagttc gacatggacg aggacgaggc gacgggcggc gtcgccatta 1921 gcggcgtccc acacgactac ctgttggagg taagcgatga tacgctcaag aggtgggacc 1981 tccgaatgga cggcagtctc tgggagatag caagggccct cgttaaagca gatttaagcg 2041 ataaggcgca attggagccc cagaatccct cgatgacgtt cctgctcgac gccctcagtg 2101 gccagcagcc caagcagccg aagcagccgg cggaggcccg ggaaggcggt gccgccaaag 2161 agttcctaat cgacgacccg ctgcacttct ccgtcctgga ggtttcggcc aggagccagc 2221 tgcagcagca ggcccactat ctggccgccc taaccgggca attcggtctc gggctggagg 2281 agcagaagcg caaggtggag gccggctatg tgtcgctcaa cgacaactac acggcctgct 2341 cctcggttta cggcggcggc gctggttcgc cagctgccat cgagggcagc aagccctcga 2401 cttcctccgc gacctcttcc ggcggcagca actgcggcgg cggcgcctcc tcctcctccg 2461 acgcgctctc cggcgagctg cgtcccgcga agattggacg catggtcgct ggagcagcgt 2521 cgacggcagc tgcgtcgatg ggtggcaagg ccacaacgcg ccagctggac gagaatggca 2581 atgccttgag cgatggcttt ggaggagcca ctggagtggc caccagcagc aatggaaacc 2641 agttcacggc cttgataacc accacagtgg gcggcagtgc caccacctcc tcctcgtcgg 2701 ccgcccaccg tcagaatagc gtgtccacgc tgctctccac gggcacgaac accaccacca 2761 cggccatggc agccgcagcg gtggctgcat cctacagcca gctgcaacag gcgcccagcg 2821 gtggagctgt tgctgccggg ccgggaatag gcattggcat ccagcagaat cccaccaagc 2881 agaaggccaa gaagaagtcg cagcaggaga ggaatacgac caccgtggac gtggagtcgg 2941 tggccggcta tcggggcaac gatcccgtcg agcagctggt caagtacatc gagaacgatg 3001 tgaatggcgg aggcgggaac actgcagcgg ggcagcgcaa gaaggagcgc aagaagcaga 3061 acaagctcaa gaagagcaac tcgctggagg agctgcgcag ctgctcgaaa atggaggtgg 3121 acgatttgaa gcgccagtcg gcgaccacgg agatgatgcg tcagaagaag ggcccaaata 3181 atgctggccc aagcggcact tcctcctccg ccgccgccgc cggtggcaag cacaattcgg 3241 cctccgtggc ggacataaac aagaattgca acaaggagca gcagcaggtg caggtgcagg 3301 tgcggaattc gagcagtaat ccgggcggaa cgcagcagcg gaagggcgag cggcgatcgt 3361 ggggcaccga ggagctgcag tacctgggcg accgccagga aatgtctgca gcctggtcgg 3421 aacccgaatc cctggcccag aagccactca cttcgctgcc cgccttaacg cgcatgtccg 3481 agctggacgc cctgaacact gtgctctccg aaacggccga gttccatgtg gtgaccaaga 3541 agaagaaacc aaagaagcaa cgcgccgtca ccatggacga tgcggcggtg gcggtggcgg 3601 cggcggccac cacgggtggc aatttgcagc gcatgcagca gatcaccaag tcggcctcct 3661 cgaacatgat gtcccagcgg atgcactact acaccagtag caacaacaac ggaggaggag 3721 caggagtagc tacctacaag cagcagcagg agcactacca ggcgcagcag ggccagcacc 3781 atcatcatca tcatcatcac caccaccatc atcaccatca tggcggctcg gcggtttcca 3841 atcaggtgga tggatcgcgt cgcaagtcca cctcctccat gccgccgtcg gagaagtccg 3901 actccagtga tctcgactcg gtccactcgc tgcccatcca gacgggcaag aagaagagcc 3961 tgggcggcgg cggcggcaac aacaagcagc gggcggcgca ggccgccagt cagcggcagg 4021 cgaagcaaaa taatagctca ccggcgccca tttcgtatgc ggatattgcg cgcaacaagc 4081 aggaggcttt gaaccaggcc gcggccagcg acacggaact ggagctcaag ggcagcaagt 4141 ccaagtcgcg gcccgacttt ccagagctgc cagcagggaa tcagcagcag cagcaaccga 4201 tcgttgtcag caatcaaaat acggcgccgt cctcgtccag ttcgattagc tactcgcaga 4261 gcctgaatgc cacgcccgcc agcagcagca gcgatgcgga gtcgctcaac tctccagagc 4321 tccaagtggt agcctgcagc ctggccacgt ccacgagcag ctgcggcagc ggcagcagca 4381 gcagcagttc cagcgccagc acctcctcca cagcctcctc ctccgcctcg ccgcccgcgc 4441 tgcagaagtc gaagagcgtg gagcacgacg ccagctacag ctgcacaagc agcaacctgg 4501 accagcagta tccggcgctg gagaagaccg tcaagcggca cagcaccaac aatgtgtccg 4561 tggccgtcgc ctcctcctcg gcttcgctgt acaactttgc agcggcagcc aagcagcagc 4621 tggcggagaa agccgctgca gcaacaacta ctacctcaac tgcagtttca gttccagctg 4681 ctcctggttc gtcctcgact ccctcgcctg ctgtcaagtt gaaggccaag ccaaaggagc 4741 tgtctcccag cagcagcagc agcagcaaga agcctcctaa agaggaggcg acgtcgtctt 4801 cgtccaaggc gaccattagc accagcacca cgaccacgac cacgcaaaag accacggctg 4861 ccacgcagac cgagggagcc aagaagctca gcagcagtag ctgcattgcc aagggagccg 4921 gtgccgtttt ggaggccacc gccggcagga gggcggtgat tatactcaac gatgatcgcg 4981 aggcgggcag gagcaacaac gagttcattt tcggggactt taacgaggat gagctgaagc 5041 tgttcgacga taatttagag gatgaagtgc aggccgcgaa taagcagcag caaacggagg 5101 cggaagatga ggcggaagat gcagatcaaa cagaagtgga gagccgggaa aaggaatcgc 5161 agcagctgaa tgattcgggg gccgcttcag atgcagtcaa cagctcggcc agcctggata 5221 tgctctcgat ttcggcggag acgggacaat cgtcgccgag cgccgccagt ctgattaact 5281 cgtccacgcc ctcgggctct tcgtccgcgt cggccagcac ctccacctcg tcgtcctcga 5341 tttcgtcctc ctcctcctcg ggcagcaacg gcaacggcgc cgcctgtctg gcctccattt 5401 cgggcatgct cggccaatca gtggccaatc agtcggggga tagcggcatc tatgccgcag 5461 ccaatacgtc catcaaggag caggtcaaca atttcctcag caaggcgagc agcagcgagg 5521 agacgctgcc gagcaccaac tcgatttcga tgcagcaact ggagacgtgc aacgacattg 5581 aggcggccat catagccgcc gcccgtgcgg cagccgctgc ccggagcacc agctgcagtc 5641 gcagcaactc gcaggagcag gagcagcagg ccaagacaat taggtcgaat tcaaatacaa 5701 attcaaatcc caatcccaat ccggagacga aagtagccct gcccgtgttt atgaactaca 5761 acgacgacga cgaagaggac gacgagagct tgcaggaact gagcttcatg gcggacctta 5821 aggatgctgc ggccacgacg tccgcggagg cggaggctca ggaggttact gtgctgccgc 5881 cgccgccgcc ctcgcgaccg gcgatgatga ccaacacgga actgattgtc gactacatcg 5941 ccaacacctg gaatgccatt gccaatagca agtatgtcac atactacaac gagcgggagc 6001 aggagaccta gaaatcagat cagcaacagc agcagcagca gcaacagcaa caccaatcgc 6061 aatagcaacg tcagcaatat cggcagctga gaacaggaga gaggagttta gttcgaattg 6121 catgttccga tgtttatatt tcactttttt tttttttact ttgtgctggg ccatcgttta 6181 tacatctacc gatatcgtac atacactata aataattgct ataacaatac gcttttatgc 6241 taattaatgt aacgaatcaa tggattcgag cgcggcagcg gaggatcagg attgtcagga 6301 ttgcaggatt gtcaggattg tcagggtgtg tctgtgtttc cagtatgaat gcgagcgagt 6361 gcctgagatt aggagtatag gatctattta gatgcaggtc gataatcgcc aggagaagat 6421 cgaacacgaa ccctcaaacc gttcgtacag ctgtgaataa gaagggaaac attactagga 6481 aagaggaaat tagaagagaa agtaatcaga agatcagagg atcgaaaaca agctacaagt 6541 ggatatttat ttaacgttag ttgaccgcga tttaacgatg cgatgcatag tgatgttcaa 6601 tcaagcattt ggatctgctt ttgttaattt acaaccttct ggctccttaa aacgcaacgt 6661 tttaccatta ctattactat tactgtactt taattattat tactactatt acgcaagcgt 6721 ttttttttgt ctttgttttt taaacgcccc acgagatcat cggagggcgt gctatattgc 6781 aaaagcagaa attaaaacta atcctagttc ttagacagag tcaacgtcgc gtgtacatat 6841 atatatgaga ccagaagttt aggaggcagt tcgaccattg agtttatgtg ttagagagag 6901 gaaagaaaga aagaaagaaa gccccacgga aaatatttga tatgtgtgtg tatgataacg 6961 actatttaaa gtaaactatg taaggcccgc tccttagctc cggctagcca taaataagcc 7021 tcatgaggaa agtatgttag acagcataac cgcaaaacag aaaacagaaa accacaaaaa 7081 accagcaaaa acactaaaaa ctattatgca cttacgaaaa atgccgccgt ttagcaggga 7141 gagcctcaga aggtctctcc gaagggtaaa aaataaaaga aggatagtag atatcgtaac 7201 cattaaaaca gaaaatcgta aaaaaac