Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218834 7446 bp mRNA linear INV 09-DEC-2024 variant X3, mRNA. ACCESSION XM_070218834 VERSION XM_070218834.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7446 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7446 /gene="tyf" /note="twenty-four; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108067516" CDS 744..6230 /gene="tyf" /codon_start=1 /product="pneumococcal serine-rich repeat protein isoform X1" /protein_id="XP_070074935.1" /db_xref="GeneID:108067516" /translation="MNNEQTPSSSDTSADRVGGSGSGSGSLSGTGSESAIKLPIPDTP IVSIAAGTMSESTTTTTATKTTPTPFPQEQLITMMSDHVAQLDEASVSQEAKGAVAAT NHVATKKSSSPSNSHSHATNHAAAAEAGKDSGAAAAAAGGDTFSTVFAMLNDTQGEEL SRPNRRVLQYGATAKGKTQDDQNVGKRQKKKKTKYDTWEDSDFNDLDDASLKKLLEEA YWYRNPGDRKNKSERFLQMLKKAEYDEEISYRAIKSCLTLNPSALASSAAAAAAGSSG GGSSSAGHNSGYSSTSTSTNHRSTDPGQQRHKQGGSLQDLVEAAHRSELATTSAAAAA ATAAASQRFNCDYQLSGRSNRRQQQQQQQHNQNATSSATASASKKIKNSSVSGRQREG GSLPSSVNFEPAAAMDAKQQQKQQQQEGSGSSAAGGSKNHSCSSLPSHLGDRDPEAGI QFDMDEDEATGGVAISGVPHDYLLEVSDDTLKRWDLRMDGSLWEIARALVKADLSDKA QLEPQNPSMTFLLDALSGQQPKQPKQPAEAREGGAAKEFLIDDPLHFSVLEVSARSQL QQQAHYLAALTGQFGLGLEEQKRKVEAGYVSLNDNYTACSSVYGGGAGSPAAIEGSKP STSSATSSGGSNCGGGASSSSDALSGELRPAKIGRMVAGAASTAAASMGGKATTRQLD ENGNALSDGFGGATGVATSSNGNQFTALITTTVGGSATTSSSSAAHRQNSVSTLLSTG TNTTTTAMAAAAVAASYSQLQQAPSGGAVAAGPGIGIGIQQNPTKQKAKKKSQQERNT TTVDVESVAGYRGNDPVEQLVKYIENDVNGGGGNTAAGQRKKERKKQNKLKKSNSLEE LRSCSKMEVDDLKRQSATTEMMRQKKGPNNAGPSGTSSSAAAAGGKHNSASVADINKN CNKEQQQVQVQVRNSSSNPGGTQQRKGERRSWGTEELQYLGDRQEMSAAWSEPESLAQ KPLTSLPALTRMSELDALNTVLSETAEFHVVTKKKKPKKQRAVTMDDAAVAVAAAATT GGNLQRMQQITKSASSNMMSQRMHYYTSSNNNGGGAGVATYKQQQEHYQAQQGQHHHH HHHHHHHHHHHGGSAVSNQVDGSRRKSTSSMPPSEKSDSSDLDSVHSLPIQTGKKKSL GGGGGNNKQRAAQAASQRQAKQNNSSPAPISYADIARNKQEALNQAAASDTELELKGS KSKSRPDFPELPAGNQQQQQPIVVSNQNTAPSSSSSISYSQSLNATPASSSSDAESLN SPELQVVACSLATSTSSCGSGSSSSSSSASTSSTASSSASPPALQKSKSVEHDASYSC TSSNLDQQYPALEKTVKRHSTNNVSVAVASSSASLYNFAAAAKQQLAEKAAAATTTTS TAVSVPAAPGSSSTPSPAVKLKAKPKELSPSSSSSSKKPPKEEATSSSSKATISTSTT TTTTQKTTAATQTEGAKKLSSSSCIAKGAGAVLEATAGRRAVIILNDDREAGRSNNEF IFGDFNEDELKLFDDNLEDEVQAANKQQQTEAEDEAEDADQTEVESREKESQQLNDSG AASDAVNSSASLDMLSISAETGQSSPSAASLINSSTPSGSSSASASTSTSSSSISSSS SSGSNGNGAACLASISGMLGQSVANQSGDSGIYAAANTSIKEQVNNFLSKASSSEETL PSTNSISMQQLETCNDIEAAIIAAARAAAAARSTSCSRSNSQEQEQQAKTIRSNSNTN SNPNPNPETKVALPVFMNYNDDDEEDDESLQELSFMADLKDAAATTSAEAEAQEVTVL PPPPPSRPAMMTNTELIVDYIANTWNAIANSKYVTYYNEREQET" polyA_site 7446 /gene="tyf" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtgttgccac tgacaacagc cgcagggctg ccaacttgct ggggcatttg ttttaaactt 61 ggttttgtta ttgctaatta gctgggatag gggtttctaa actgtattgg ttaattagtt 121 aattgtggga aacgcaagga ttgccaggac ctcgcttaat cgcttaagga tagcctatcc 181 ctagccggag ttgacaaccc tgccgccttc tccagcgcag ttggcaacac tgtgcggctt 241 ggcaggcaaa gcaaaaaaaa aaaaaaagcg gaaaagaata gaaggaaata tggggaaaaa 301 acctgtgctt tttaaagaaa tatgaagcca gcgggccgca aaggggacgc caaggcgagc 361 agacacaccc accaccaccc accgcccaac cgccacttgt ccgcataacc acaacaacaa 421 caacaaatgc cgcagaacag aggacctacg taaatgccac ggccagagat tcgagattcg 481 cgattcgaga ttcccagtga cgacaggcct gtcaagtgca gcaggagtcc cgagtgatac 541 gccataggtg ggcccccctg taactcacag tcaggaatcc gggaatccag gaatccagga 601 atccaggcgg cagagcactt gcagccgcgg tggcgaccac acggcggctg ggcagctggg 661 cttcctagga aaaccgagga gaggcaacag ttaattcgag caattcgaat ggcatttgtt 721 tgtttccacc aaacgaccaa aagatgaaca atgaacaaac gccgtcatca tcggacacat 781 cggcggatcg tgtgggagga tctggatctg gatcaggttc tttatctggt actggatccg 841 agtcagctat caagctgccc attccggaca cgcccatcgt ctcgattgcc gctgggacga 901 tgagcgagag caccacgacg accaccgcca ccaagacgac gccgacgccg ttcccgcagg 961 agcagctcat caccatgatg tcggaccatg tggcgcaact tgacgaggct tctgttagcc 1021 aggaggccaa gggagcagtg gcggctacca accatgtagc aaccaagaag tcatcatccc 1081 ccagtaatag ccatagccac gctactaacc acgctgcagc ggcagaagct ggcaaagatt 1141 caggagcagc agcagcagca gcaggagggg atacattctc gaccgtcttc gccatgctga 1201 acgatacgca aggcgaagag ctgtcgcgac caaaccgcag agtcctccaa tacggggcca 1261 ctgccaaggg caagacccag gacgatcaga atgtcggcaa gcgacagaag aagaaaaaga 1321 caaaatacga tacctgggaa gatagcgatt ttaatgatct cgacgacgca tcattgaaga 1381 aacttctcga ggaggcatat tggtatcgaa atcctggcga caggaagaac aagagcgagc 1441 gatttctgca aatgctcaaa aaggctgagt acgacgagga gatctcttat cgtgccatca 1501 aatcctgcct cacactcaac ccatccgcac tagcgtccag tgcagcagcg gcggcagcag 1561 gctcgagcgg cgggggcagc agcagtgcag ggcacaacag cggctacagc tccacctcca 1621 cctccaccaa tcaccggtcg acggatcccg gccagcagcg gcacaagcag ggcggctccc 1681 tgcaggatct cgtcgaggcg gcgcaccgca gtgagctggc caccacctcg gcggcggcgg 1741 ctgcagcgac ggcggcggca agccaacgtt tcaactgtga ttaccagctg agtggccgct 1801 ccaatcgccg ccagcagcag cagcagcagc agcacaacca aaacgccacc tcctccgcaa 1861 ctgcatccgc atctaagaag atcaagaact catccgtctc gggccggcag cgcgaaggag 1921 gcagcctgcc cagcagcgtt aactttgagc cggcagctgc catggatgcc aagcagcagc 1981 agaagcagca gcagcaggag ggatccggat catcggcagc aggtggcagc aagaaccaca 2041 gctgcagcag cctgcccagc catctgggcg atcgggatcc cgaggcgggc atccagttcg 2101 acatggacga ggacgaggcg acgggcggcg tcgccattag cggcgtccca cacgactacc 2161 tgttggaggt aagcgatgat acgctcaaga ggtgggacct ccgaatggac ggcagtctct 2221 gggagatagc aagggccctc gttaaagcag atttaagcga taaggcgcaa ttggagcccc 2281 agaatccctc gatgacgttc ctgctcgacg ccctcagtgg ccagcagccc aagcagccga 2341 agcagccggc ggaggcccgg gaaggcggtg ccgccaaaga gttcctaatc gacgacccgc 2401 tgcacttctc cgtcctggag gtttcggcca ggagccagct gcagcagcag gcccactatc 2461 tggccgccct aaccgggcaa ttcggtctcg ggctggagga gcagaagcgc aaggtggagg 2521 ccggctatgt gtcgctcaac gacaactaca cggcctgctc ctcggtttac ggcggcggcg 2581 ctggttcgcc agctgccatc gagggcagca agccctcgac ttcctccgcg acctcttccg 2641 gcggcagcaa ctgcggcggc ggcgcctcct cctcctccga cgcgctctcc ggcgagctgc 2701 gtcccgcgaa gattggacgc atggtcgctg gagcagcgtc gacggcagct gcgtcgatgg 2761 gtggcaaggc cacaacgcgc cagctggacg agaatggcaa tgccttgagc gatggctttg 2821 gaggagccac tggagtggcc accagcagca atggaaacca gttcacggcc ttgataacca 2881 ccacagtggg cggcagtgcc accacctcct cctcgtcggc cgcccaccgt cagaatagcg 2941 tgtccacgct gctctccacg ggcacgaaca ccaccaccac ggccatggca gccgcagcgg 3001 tggctgcatc ctacagccag ctgcaacagg cgcccagcgg tggagctgtt gctgccgggc 3061 cgggaatagg cattggcatc cagcagaatc ccaccaagca gaaggccaag aagaagtcgc 3121 agcaggagag gaatacgacc accgtggacg tggagtcggt ggccggctat cggggcaacg 3181 atcccgtcga gcagctggtc aagtacatcg agaacgatgt gaatggcgga ggcgggaaca 3241 ctgcagcggg gcagcgcaag aaggagcgca agaagcagaa caagctcaag aagagcaact 3301 cgctggagga gctgcgcagc tgctcgaaaa tggaggtgga cgatttgaag cgccagtcgg 3361 cgaccacgga gatgatgcgt cagaagaagg gcccaaataa tgctggccca agcggcactt 3421 cctcctccgc cgccgccgcc ggtggcaagc acaattcggc ctccgtggcg gacataaaca 3481 agaattgcaa caaggagcag cagcaggtgc aggtgcaggt gcggaattcg agcagtaatc 3541 cgggcggaac gcagcagcgg aagggcgagc ggcgatcgtg gggcaccgag gagctgcagt 3601 acctgggcga ccgccaggaa atgtctgcag cctggtcgga acccgaatcc ctggcccaga 3661 agccactcac ttcgctgccc gccttaacgc gcatgtccga gctggacgcc ctgaacactg 3721 tgctctccga aacggccgag ttccatgtgg tgaccaagaa gaagaaacca aagaagcaac 3781 gcgccgtcac catggacgat gcggcggtgg cggtggcggc ggcggccacc acgggtggca 3841 atttgcagcg catgcagcag atcaccaagt cggcctcctc gaacatgatg tcccagcgga 3901 tgcactacta caccagtagc aacaacaacg gaggaggagc aggagtagct acctacaagc 3961 agcagcagga gcactaccag gcgcagcagg gccagcacca tcatcatcat catcatcacc 4021 accaccatca tcaccatcat ggcggctcgg cggtttccaa tcaggtggat ggatcgcgtc 4081 gcaagtccac ctcctccatg ccgccgtcgg agaagtccga ctccagtgat ctcgactcgg 4141 tccactcgct gcccatccag acgggcaaga agaagagcct gggcggcggc ggcggcaaca 4201 acaagcagcg ggcggcgcag gccgccagtc agcggcaggc gaagcaaaat aatagctcac 4261 cggcgcccat ttcgtatgcg gatattgcgc gcaacaagca ggaggctttg aaccaggccg 4321 cggccagcga cacggaactg gagctcaagg gcagcaagtc caagtcgcgg cccgactttc 4381 cagagctgcc agcagggaat cagcagcagc agcaaccgat cgttgtcagc aatcaaaata 4441 cggcgccgtc ctcgtccagt tcgattagct actcgcagag cctgaatgcc acgcccgcca 4501 gcagcagcag cgatgcggag tcgctcaact ctccagagct ccaagtggta gcctgcagcc 4561 tggccacgtc cacgagcagc tgcggcagcg gcagcagcag cagcagttcc agcgccagca 4621 cctcctccac agcctcctcc tccgcctcgc cgcccgcgct gcagaagtcg aagagcgtgg 4681 agcacgacgc cagctacagc tgcacaagca gcaacctgga ccagcagtat ccggcgctgg 4741 agaagaccgt caagcggcac agcaccaaca atgtgtccgt ggccgtcgcc tcctcctcgg 4801 cttcgctgta caactttgca gcggcagcca agcagcagct ggcggagaaa gccgctgcag 4861 caacaactac tacctcaact gcagtttcag ttccagctgc tcctggttcg tcctcgactc 4921 cctcgcctgc tgtcaagttg aaggccaagc caaaggagct gtctcccagc agcagcagca 4981 gcagcaagaa gcctcctaaa gaggaggcga cgtcgtcttc gtccaaggcg accattagca 5041 ccagcaccac gaccacgacc acgcaaaaga ccacggctgc cacgcagacc gagggagcca 5101 agaagctcag cagcagtagc tgcattgcca agggagccgg tgccgttttg gaggccaccg 5161 ccggcaggag ggcggtgatt atactcaacg atgatcgcga ggcgggcagg agcaacaacg 5221 agttcatttt cggggacttt aacgaggatg agctgaagct gttcgacgat aatttagagg 5281 atgaagtgca ggccgcgaat aagcagcagc aaacggaggc ggaagatgag gcggaagatg 5341 cagatcaaac agaagtggag agccgggaaa aggaatcgca gcagctgaat gattcggggg 5401 ccgcttcaga tgcagtcaac agctcggcca gcctggatat gctctcgatt tcggcggaga 5461 cgggacaatc gtcgccgagc gccgccagtc tgattaactc gtccacgccc tcgggctctt 5521 cgtccgcgtc ggccagcacc tccacctcgt cgtcctcgat ttcgtcctcc tcctcctcgg 5581 gcagcaacgg caacggcgcc gcctgtctgg cctccatttc gggcatgctc ggccaatcag 5641 tggccaatca gtcgggggat agcggcatct atgccgcagc caatacgtcc atcaaggagc 5701 aggtcaacaa tttcctcagc aaggcgagca gcagcgagga gacgctgccg agcaccaact 5761 cgatttcgat gcagcaactg gagacgtgca acgacattga ggcggccatc atagccgccg 5821 cccgtgcggc agccgctgcc cggagcacca gctgcagtcg cagcaactcg caggagcagg 5881 agcagcaggc caagacaatt aggtcgaatt caaatacaaa ttcaaatccc aatcccaatc 5941 cggagacgaa agtagccctg cccgtgttta tgaactacaa cgacgacgac gaagaggacg 6001 acgagagctt gcaggaactg agcttcatgg cggaccttaa ggatgctgcg gccacgacgt 6061 ccgcggaggc ggaggctcag gaggttactg tgctgccgcc gccgccgccc tcgcgaccgg 6121 cgatgatgac caacacggaa ctgattgtcg actacatcgc caacacctgg aatgccattg 6181 ccaatagcaa gtatgtcaca tactacaacg agcgggagca ggagacctag aaatcagatc 6241 agcaacagca gcagcagcag caacagcaac accaatcgca atagcaacgt cagcaatatc 6301 ggcagctgag aacaggagag aggagtttag ttcgaattgc atgttccgat gtttatattt 6361 cacttttttt ttttttactt tgtgctgggc catcgtttat acatctaccg atatcgtaca 6421 tacactataa ataattgcta taacaatacg cttttatgct aattaatgta acgaatcaat 6481 ggattcgagc gcggcagcgg aggatcagga ttgtcaggat tgcaggattg tcaggattgt 6541 cagggtgtgt ctgtgtttcc agtatgaatg cgagcgagtg cctgagatta ggagtatagg 6601 atctatttag atgcaggtcg ataatcgcca ggagaagatc gaacacgaac cctcaaaccg 6661 ttcgtacagc tgtgaataag aagggaaaca ttactaggaa agaggaaatt agaagagaaa 6721 gtaatcagaa gatcagagga tcgaaaacaa gctacaagtg gatatttatt taacgttagt 6781 tgaccgcgat ttaacgatgc gatgcatagt gatgttcaat caagcatttg gatctgcttt 6841 tgttaattta caaccttctg gctccttaaa acgcaacgtt ttaccattac tattactatt 6901 actgtacttt aattattatt actactatta cgcaagcgtt tttttttgtc tttgtttttt 6961 aaacgcccca cgagatcatc ggagggcgtg ctatattgca aaagcagaaa ttaaaactaa 7021 tcctagttct tagacagagt caacgtcgcg tgtacatata tatatgagac cagaagttta 7081 ggaggcagtt cgaccattga gtttatgtgt tagagagagg aaagaaagaa agaaagaaag 7141 ccccacggaa aatatttgat atgtgtgtgt atgataacga ctatttaaag taaactatgt 7201 aaggcccgct ccttagctcc ggctagccat aaataagcct catgaggaaa gtatgttaga 7261 cagcataacc gcaaaacaga aaacagaaaa ccacaaaaaa ccagcaaaaa cactaaaaac 7321 tattatgcac ttacgaaaaa tgccgccgtt tagcagggag agcctcagaa ggtctctccg 7381 aagggtaaaa aataaaagaa ggatagtaga tatcgtaacc attaaaacag aaaatcgtaa 7441 aaaaac