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LOCUS XM_070218833 7528 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_070218833 VERSION XM_070218833.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7528 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7528 /gene="tyf" /note="twenty-four; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108067516" CDS 826..6312 /gene="tyf" /codon_start=1 /product="pneumococcal serine-rich repeat protein isoform X1" /protein_id="XP_070074934.1" /db_xref="GeneID:108067516" /translation="MNNEQTPSSSDTSADRVGGSGSGSGSLSGTGSESAIKLPIPDTP IVSIAAGTMSESTTTTTATKTTPTPFPQEQLITMMSDHVAQLDEASVSQEAKGAVAAT NHVATKKSSSPSNSHSHATNHAAAAEAGKDSGAAAAAAGGDTFSTVFAMLNDTQGEEL SRPNRRVLQYGATAKGKTQDDQNVGKRQKKKKTKYDTWEDSDFNDLDDASLKKLLEEA YWYRNPGDRKNKSERFLQMLKKAEYDEEISYRAIKSCLTLNPSALASSAAAAAAGSSG GGSSSAGHNSGYSSTSTSTNHRSTDPGQQRHKQGGSLQDLVEAAHRSELATTSAAAAA ATAAASQRFNCDYQLSGRSNRRQQQQQQQHNQNATSSATASASKKIKNSSVSGRQREG GSLPSSVNFEPAAAMDAKQQQKQQQQEGSGSSAAGGSKNHSCSSLPSHLGDRDPEAGI QFDMDEDEATGGVAISGVPHDYLLEVSDDTLKRWDLRMDGSLWEIARALVKADLSDKA QLEPQNPSMTFLLDALSGQQPKQPKQPAEAREGGAAKEFLIDDPLHFSVLEVSARSQL QQQAHYLAALTGQFGLGLEEQKRKVEAGYVSLNDNYTACSSVYGGGAGSPAAIEGSKP STSSATSSGGSNCGGGASSSSDALSGELRPAKIGRMVAGAASTAAASMGGKATTRQLD ENGNALSDGFGGATGVATSSNGNQFTALITTTVGGSATTSSSSAAHRQNSVSTLLSTG TNTTTTAMAAAAVAASYSQLQQAPSGGAVAAGPGIGIGIQQNPTKQKAKKKSQQERNT TTVDVESVAGYRGNDPVEQLVKYIENDVNGGGGNTAAGQRKKERKKQNKLKKSNSLEE LRSCSKMEVDDLKRQSATTEMMRQKKGPNNAGPSGTSSSAAAAGGKHNSASVADINKN CNKEQQQVQVQVRNSSSNPGGTQQRKGERRSWGTEELQYLGDRQEMSAAWSEPESLAQ KPLTSLPALTRMSELDALNTVLSETAEFHVVTKKKKPKKQRAVTMDDAAVAVAAAATT GGNLQRMQQITKSASSNMMSQRMHYYTSSNNNGGGAGVATYKQQQEHYQAQQGQHHHH HHHHHHHHHHHGGSAVSNQVDGSRRKSTSSMPPSEKSDSSDLDSVHSLPIQTGKKKSL GGGGGNNKQRAAQAASQRQAKQNNSSPAPISYADIARNKQEALNQAAASDTELELKGS KSKSRPDFPELPAGNQQQQQPIVVSNQNTAPSSSSSISYSQSLNATPASSSSDAESLN SPELQVVACSLATSTSSCGSGSSSSSSSASTSSTASSSASPPALQKSKSVEHDASYSC TSSNLDQQYPALEKTVKRHSTNNVSVAVASSSASLYNFAAAAKQQLAEKAAAATTTTS TAVSVPAAPGSSSTPSPAVKLKAKPKELSPSSSSSSKKPPKEEATSSSSKATISTSTT TTTTQKTTAATQTEGAKKLSSSSCIAKGAGAVLEATAGRRAVIILNDDREAGRSNNEF IFGDFNEDELKLFDDNLEDEVQAANKQQQTEAEDEAEDADQTEVESREKESQQLNDSG AASDAVNSSASLDMLSISAETGQSSPSAASLINSSTPSGSSSASASTSTSSSSISSSS SSGSNGNGAACLASISGMLGQSVANQSGDSGIYAAANTSIKEQVNNFLSKASSSEETL PSTNSISMQQLETCNDIEAAIIAAARAAAAARSTSCSRSNSQEQEQQAKTIRSNSNTN SNPNPNPETKVALPVFMNYNDDDEEDDESLQELSFMADLKDAAATTSAEAEAQEVTVL PPPPPSRPAMMTNTELIVDYIANTWNAIANSKYVTYYNEREQET" polyA_site 7528 /gene="tyf" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtgttgccac tgacaacagc cgcagggctg ccaacttgct ggggcatttg ttttaaactt 61 ggttttgtta ttgctaatta gctgggatag gggtttctaa actgtattgg ttaattagtt 121 aattgtggga aacgcaagga ttgccaggac ctcgcttaat cgcttaagga tagcctatcc 181 ctagccggag ttgacaaccc tgccgccttc tccagcgcag ttggcaacac tgtgcggctt 241 ggcaggcaaa gcaaaaaaaa aaaaaaagcg gaaaagaata gaaggaaata tggggaaaaa 301 acctgtgctt tttaaagaaa tatgaagcca gcgggccgca aaggggacgc caaggcgagc 361 agacacaccc accaccaccc accgcccaac cgccacttgt ccgcataacc acaacaacaa 421 caacaaatgc cgcagaacag agtcagtggg ccaatatgtc tcatttgcca tttccatttt 481 ggattcaccc cctttgaaaa cccccctctc aatttggagc cccggaccta cgtaaatgcc 541 acggccagag attcgagatt cgcgattcga gattcccagt gacgacaggc ctgtcaagtg 601 cagcaggagt cccgagtgat acgccatagg tgggcccccc tgtaactcac agtcaggaat 661 ccgggaatcc aggaatccag gaatccaggc ggcagagcac ttgcagccgc ggtggcgacc 721 acacggcggc tgggcagctg ggcttcctag gaaaaccgag gagaggcaac agttaattcg 781 agcaattcga atggcatttg tttgtttcca ccaaacgacc aaaagatgaa caatgaacaa 841 acgccgtcat catcggacac atcggcggat cgtgtgggag gatctggatc tggatcaggt 901 tctttatctg gtactggatc cgagtcagct atcaagctgc ccattccgga cacgcccatc 961 gtctcgattg ccgctgggac gatgagcgag agcaccacga cgaccaccgc caccaagacg 1021 acgccgacgc cgttcccgca ggagcagctc atcaccatga tgtcggacca tgtggcgcaa 1081 cttgacgagg cttctgttag ccaggaggcc aagggagcag tggcggctac caaccatgta 1141 gcaaccaaga agtcatcatc ccccagtaat agccatagcc acgctactaa ccacgctgca 1201 gcggcagaag ctggcaaaga ttcaggagca gcagcagcag cagcaggagg ggatacattc 1261 tcgaccgtct tcgccatgct gaacgatacg caaggcgaag agctgtcgcg accaaaccgc 1321 agagtcctcc aatacggggc cactgccaag ggcaagaccc aggacgatca gaatgtcggc 1381 aagcgacaga agaagaaaaa gacaaaatac gatacctggg aagatagcga ttttaatgat 1441 ctcgacgacg catcattgaa gaaacttctc gaggaggcat attggtatcg aaatcctggc 1501 gacaggaaga acaagagcga gcgatttctg caaatgctca aaaaggctga gtacgacgag 1561 gagatctctt atcgtgccat caaatcctgc ctcacactca acccatccgc actagcgtcc 1621 agtgcagcag cggcggcagc aggctcgagc ggcgggggca gcagcagtgc agggcacaac 1681 agcggctaca gctccacctc cacctccacc aatcaccggt cgacggatcc cggccagcag 1741 cggcacaagc agggcggctc cctgcaggat ctcgtcgagg cggcgcaccg cagtgagctg 1801 gccaccacct cggcggcggc ggctgcagcg acggcggcgg caagccaacg tttcaactgt 1861 gattaccagc tgagtggccg ctccaatcgc cgccagcagc agcagcagca gcagcacaac 1921 caaaacgcca cctcctccgc aactgcatcc gcatctaaga agatcaagaa ctcatccgtc 1981 tcgggccggc agcgcgaagg aggcagcctg cccagcagcg ttaactttga gccggcagct 2041 gccatggatg ccaagcagca gcagaagcag cagcagcagg agggatccgg atcatcggca 2101 gcaggtggca gcaagaacca cagctgcagc agcctgccca gccatctggg cgatcgggat 2161 cccgaggcgg gcatccagtt cgacatggac gaggacgagg cgacgggcgg cgtcgccatt 2221 agcggcgtcc cacacgacta cctgttggag gtaagcgatg atacgctcaa gaggtgggac 2281 ctccgaatgg acggcagtct ctgggagata gcaagggccc tcgttaaagc agatttaagc 2341 gataaggcgc aattggagcc ccagaatccc tcgatgacgt tcctgctcga cgccctcagt 2401 ggccagcagc ccaagcagcc gaagcagccg gcggaggccc gggaaggcgg tgccgccaaa 2461 gagttcctaa tcgacgaccc gctgcacttc tccgtcctgg aggtttcggc caggagccag 2521 ctgcagcagc aggcccacta tctggccgcc ctaaccgggc aattcggtct cgggctggag 2581 gagcagaagc gcaaggtgga ggccggctat gtgtcgctca acgacaacta cacggcctgc 2641 tcctcggttt acggcggcgg cgctggttcg ccagctgcca tcgagggcag caagccctcg 2701 acttcctccg cgacctcttc cggcggcagc aactgcggcg gcggcgcctc ctcctcctcc 2761 gacgcgctct ccggcgagct gcgtcccgcg aagattggac gcatggtcgc tggagcagcg 2821 tcgacggcag ctgcgtcgat gggtggcaag gccacaacgc gccagctgga cgagaatggc 2881 aatgccttga gcgatggctt tggaggagcc actggagtgg ccaccagcag caatggaaac 2941 cagttcacgg ccttgataac caccacagtg ggcggcagtg ccaccacctc ctcctcgtcg 3001 gccgcccacc gtcagaatag cgtgtccacg ctgctctcca cgggcacgaa caccaccacc 3061 acggccatgg cagccgcagc ggtggctgca tcctacagcc agctgcaaca ggcgcccagc 3121 ggtggagctg ttgctgccgg gccgggaata ggcattggca tccagcagaa tcccaccaag 3181 cagaaggcca agaagaagtc gcagcaggag aggaatacga ccaccgtgga cgtggagtcg 3241 gtggccggct atcggggcaa cgatcccgtc gagcagctgg tcaagtacat cgagaacgat 3301 gtgaatggcg gaggcgggaa cactgcagcg gggcagcgca agaaggagcg caagaagcag 3361 aacaagctca agaagagcaa ctcgctggag gagctgcgca gctgctcgaa aatggaggtg 3421 gacgatttga agcgccagtc ggcgaccacg gagatgatgc gtcagaagaa gggcccaaat 3481 aatgctggcc caagcggcac ttcctcctcc gccgccgccg ccggtggcaa gcacaattcg 3541 gcctccgtgg cggacataaa caagaattgc aacaaggagc agcagcaggt gcaggtgcag 3601 gtgcggaatt cgagcagtaa tccgggcgga acgcagcagc ggaagggcga gcggcgatcg 3661 tggggcaccg aggagctgca gtacctgggc gaccgccagg aaatgtctgc agcctggtcg 3721 gaacccgaat ccctggccca gaagccactc acttcgctgc ccgccttaac gcgcatgtcc 3781 gagctggacg ccctgaacac tgtgctctcc gaaacggccg agttccatgt ggtgaccaag 3841 aagaagaaac caaagaagca acgcgccgtc accatggacg atgcggcggt ggcggtggcg 3901 gcggcggcca ccacgggtgg caatttgcag cgcatgcagc agatcaccaa gtcggcctcc 3961 tcgaacatga tgtcccagcg gatgcactac tacaccagta gcaacaacaa cggaggagga 4021 gcaggagtag ctacctacaa gcagcagcag gagcactacc aggcgcagca gggccagcac 4081 catcatcatc atcatcatca ccaccaccat catcaccatc atggcggctc ggcggtttcc 4141 aatcaggtgg atggatcgcg tcgcaagtcc acctcctcca tgccgccgtc ggagaagtcc 4201 gactccagtg atctcgactc ggtccactcg ctgcccatcc agacgggcaa gaagaagagc 4261 ctgggcggcg gcggcggcaa caacaagcag cgggcggcgc aggccgccag tcagcggcag 4321 gcgaagcaaa ataatagctc accggcgccc atttcgtatg cggatattgc gcgcaacaag 4381 caggaggctt tgaaccaggc cgcggccagc gacacggaac tggagctcaa gggcagcaag 4441 tccaagtcgc ggcccgactt tccagagctg ccagcaggga atcagcagca gcagcaaccg 4501 atcgttgtca gcaatcaaaa tacggcgccg tcctcgtcca gttcgattag ctactcgcag 4561 agcctgaatg ccacgcccgc cagcagcagc agcgatgcgg agtcgctcaa ctctccagag 4621 ctccaagtgg tagcctgcag cctggccacg tccacgagca gctgcggcag cggcagcagc 4681 agcagcagtt ccagcgccag cacctcctcc acagcctcct cctccgcctc gccgcccgcg 4741 ctgcagaagt cgaagagcgt ggagcacgac gccagctaca gctgcacaag cagcaacctg 4801 gaccagcagt atccggcgct ggagaagacc gtcaagcggc acagcaccaa caatgtgtcc 4861 gtggccgtcg cctcctcctc ggcttcgctg tacaactttg cagcggcagc caagcagcag 4921 ctggcggaga aagccgctgc agcaacaact actacctcaa ctgcagtttc agttccagct 4981 gctcctggtt cgtcctcgac tccctcgcct gctgtcaagt tgaaggccaa gccaaaggag 5041 ctgtctccca gcagcagcag cagcagcaag aagcctccta aagaggaggc gacgtcgtct 5101 tcgtccaagg cgaccattag caccagcacc acgaccacga ccacgcaaaa gaccacggct 5161 gccacgcaga ccgagggagc caagaagctc agcagcagta gctgcattgc caagggagcc 5221 ggtgccgttt tggaggccac cgccggcagg agggcggtga ttatactcaa cgatgatcgc 5281 gaggcgggca ggagcaacaa cgagttcatt ttcggggact ttaacgagga tgagctgaag 5341 ctgttcgacg ataatttaga ggatgaagtg caggccgcga ataagcagca gcaaacggag 5401 gcggaagatg aggcggaaga tgcagatcaa acagaagtgg agagccggga aaaggaatcg 5461 cagcagctga atgattcggg ggccgcttca gatgcagtca acagctcggc cagcctggat 5521 atgctctcga tttcggcgga gacgggacaa tcgtcgccga gcgccgccag tctgattaac 5581 tcgtccacgc cctcgggctc ttcgtccgcg tcggccagca cctccacctc gtcgtcctcg 5641 atttcgtcct cctcctcctc gggcagcaac ggcaacggcg ccgcctgtct ggcctccatt 5701 tcgggcatgc tcggccaatc agtggccaat cagtcggggg atagcggcat ctatgccgca 5761 gccaatacgt ccatcaagga gcaggtcaac aatttcctca gcaaggcgag cagcagcgag 5821 gagacgctgc cgagcaccaa ctcgatttcg atgcagcaac tggagacgtg caacgacatt 5881 gaggcggcca tcatagccgc cgcccgtgcg gcagccgctg cccggagcac cagctgcagt 5941 cgcagcaact cgcaggagca ggagcagcag gccaagacaa ttaggtcgaa ttcaaataca 6001 aattcaaatc ccaatcccaa tccggagacg aaagtagccc tgcccgtgtt tatgaactac 6061 aacgacgacg acgaagagga cgacgagagc ttgcaggaac tgagcttcat ggcggacctt 6121 aaggatgctg cggccacgac gtccgcggag gcggaggctc aggaggttac tgtgctgccg 6181 ccgccgccgc cctcgcgacc ggcgatgatg accaacacgg aactgattgt cgactacatc 6241 gccaacacct ggaatgccat tgccaatagc aagtatgtca catactacaa cgagcgggag 6301 caggagacct agaaatcaga tcagcaacag cagcagcagc agcaacagca acaccaatcg 6361 caatagcaac gtcagcaata tcggcagctg agaacaggag agaggagttt agttcgaatt 6421 gcatgttccg atgtttatat ttcacttttt ttttttttac tttgtgctgg gccatcgttt 6481 atacatctac cgatatcgta catacactat aaataattgc tataacaata cgcttttatg 6541 ctaattaatg taacgaatca atggattcga gcgcggcagc ggaggatcag gattgtcagg 6601 attgcaggat tgtcaggatt gtcagggtgt gtctgtgttt ccagtatgaa tgcgagcgag 6661 tgcctgagat taggagtata ggatctattt agatgcaggt cgataatcgc caggagaaga 6721 tcgaacacga accctcaaac cgttcgtaca gctgtgaata agaagggaaa cattactagg 6781 aaagaggaaa ttagaagaga aagtaatcag aagatcagag gatcgaaaac aagctacaag 6841 tggatattta tttaacgtta gttgaccgcg atttaacgat gcgatgcata gtgatgttca 6901 atcaagcatt tggatctgct tttgttaatt tacaaccttc tggctcctta aaacgcaacg 6961 ttttaccatt actattacta ttactgtact ttaattatta ttactactat tacgcaagcg 7021 tttttttttg tctttgtttt ttaaacgccc cacgagatca tcggagggcg tgctatattg 7081 caaaagcaga aattaaaact aatcctagtt cttagacaga gtcaacgtcg cgtgtacata 7141 tatatatgag accagaagtt taggaggcag ttcgaccatt gagtttatgt gttagagaga 7201 ggaaagaaag aaagaaagaa agccccacgg aaaatatttg atatgtgtgt gtatgataac 7261 gactatttaa agtaaactat gtaaggcccg ctccttagct ccggctagcc ataaataagc 7321 ctcatgagga aagtatgtta gacagcataa ccgcaaaaca gaaaacagaa aaccacaaaa 7381 aaccagcaaa aacactaaaa actattatgc acttacgaaa aatgccgccg tttagcaggg 7441 agagcctcag aaggtctctc cgaagggtaa aaaataaaag aaggatagta gatatcgtaa 7501 ccattaaaac agaaaatcgt aaaaaaac