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LOCUS XM_070218832 7146 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_070218832 VERSION XM_070218832.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7146 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7146 /gene="tyf" /note="twenty-four; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108067516" CDS 444..5930 /gene="tyf" /codon_start=1 /product="pneumococcal serine-rich repeat protein isoform X1" /protein_id="XP_070074933.1" /db_xref="GeneID:108067516" /translation="MNNEQTPSSSDTSADRVGGSGSGSGSLSGTGSESAIKLPIPDTP IVSIAAGTMSESTTTTTATKTTPTPFPQEQLITMMSDHVAQLDEASVSQEAKGAVAAT NHVATKKSSSPSNSHSHATNHAAAAEAGKDSGAAAAAAGGDTFSTVFAMLNDTQGEEL SRPNRRVLQYGATAKGKTQDDQNVGKRQKKKKTKYDTWEDSDFNDLDDASLKKLLEEA YWYRNPGDRKNKSERFLQMLKKAEYDEEISYRAIKSCLTLNPSALASSAAAAAAGSSG GGSSSAGHNSGYSSTSTSTNHRSTDPGQQRHKQGGSLQDLVEAAHRSELATTSAAAAA ATAAASQRFNCDYQLSGRSNRRQQQQQQQHNQNATSSATASASKKIKNSSVSGRQREG GSLPSSVNFEPAAAMDAKQQQKQQQQEGSGSSAAGGSKNHSCSSLPSHLGDRDPEAGI QFDMDEDEATGGVAISGVPHDYLLEVSDDTLKRWDLRMDGSLWEIARALVKADLSDKA QLEPQNPSMTFLLDALSGQQPKQPKQPAEAREGGAAKEFLIDDPLHFSVLEVSARSQL QQQAHYLAALTGQFGLGLEEQKRKVEAGYVSLNDNYTACSSVYGGGAGSPAAIEGSKP STSSATSSGGSNCGGGASSSSDALSGELRPAKIGRMVAGAASTAAASMGGKATTRQLD ENGNALSDGFGGATGVATSSNGNQFTALITTTVGGSATTSSSSAAHRQNSVSTLLSTG TNTTTTAMAAAAVAASYSQLQQAPSGGAVAAGPGIGIGIQQNPTKQKAKKKSQQERNT TTVDVESVAGYRGNDPVEQLVKYIENDVNGGGGNTAAGQRKKERKKQNKLKKSNSLEE LRSCSKMEVDDLKRQSATTEMMRQKKGPNNAGPSGTSSSAAAAGGKHNSASVADINKN CNKEQQQVQVQVRNSSSNPGGTQQRKGERRSWGTEELQYLGDRQEMSAAWSEPESLAQ KPLTSLPALTRMSELDALNTVLSETAEFHVVTKKKKPKKQRAVTMDDAAVAVAAAATT GGNLQRMQQITKSASSNMMSQRMHYYTSSNNNGGGAGVATYKQQQEHYQAQQGQHHHH HHHHHHHHHHHGGSAVSNQVDGSRRKSTSSMPPSEKSDSSDLDSVHSLPIQTGKKKSL GGGGGNNKQRAAQAASQRQAKQNNSSPAPISYADIARNKQEALNQAAASDTELELKGS KSKSRPDFPELPAGNQQQQQPIVVSNQNTAPSSSSSISYSQSLNATPASSSSDAESLN SPELQVVACSLATSTSSCGSGSSSSSSSASTSSTASSSASPPALQKSKSVEHDASYSC TSSNLDQQYPALEKTVKRHSTNNVSVAVASSSASLYNFAAAAKQQLAEKAAAATTTTS TAVSVPAAPGSSSTPSPAVKLKAKPKELSPSSSSSSKKPPKEEATSSSSKATISTSTT TTTTQKTTAATQTEGAKKLSSSSCIAKGAGAVLEATAGRRAVIILNDDREAGRSNNEF IFGDFNEDELKLFDDNLEDEVQAANKQQQTEAEDEAEDADQTEVESREKESQQLNDSG AASDAVNSSASLDMLSISAETGQSSPSAASLINSSTPSGSSSASASTSTSSSSISSSS SSGSNGNGAACLASISGMLGQSVANQSGDSGIYAAANTSIKEQVNNFLSKASSSEETL PSTNSISMQQLETCNDIEAAIIAAARAAAAARSTSCSRSNSQEQEQQAKTIRSNSNTN SNPNPNPETKVALPVFMNYNDDDEEDDESLQELSFMADLKDAAATTSAEAEAQEVTVL PPPPPSRPAMMTNTELIVDYIANTWNAIANSKYVTYYNEREQET" polyA_site 7146 /gene="tyf" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggcgcatacc tgcgcccgtg tgtgtgtgcc tgtgcctgtg tgtgtgtgcg tgtgagtgcg 61 cagaaagtta tacagctgta ttcgactggc gtatttatca ataaataact actgtgatcg 121 ccggaaaact ccaattactg gggacctacg taaatgccac ggccagagat tcgagattcg 181 cgattcgaga ttcccagtga cgacaggcct gtcaagtgca gcaggagtcc cgagtgatac 241 gccataggtg ggcccccctg taactcacag tcaggaatcc gggaatccag gaatccagga 301 atccaggcgg cagagcactt gcagccgcgg tggcgaccac acggcggctg ggcagctggg 361 cttcctagga aaaccgagga gaggcaacag ttaattcgag caattcgaat ggcatttgtt 421 tgtttccacc aaacgaccaa aagatgaaca atgaacaaac gccgtcatca tcggacacat 481 cggcggatcg tgtgggagga tctggatctg gatcaggttc tttatctggt actggatccg 541 agtcagctat caagctgccc attccggaca cgcccatcgt ctcgattgcc gctgggacga 601 tgagcgagag caccacgacg accaccgcca ccaagacgac gccgacgccg ttcccgcagg 661 agcagctcat caccatgatg tcggaccatg tggcgcaact tgacgaggct tctgttagcc 721 aggaggccaa gggagcagtg gcggctacca accatgtagc aaccaagaag tcatcatccc 781 ccagtaatag ccatagccac gctactaacc acgctgcagc ggcagaagct ggcaaagatt 841 caggagcagc agcagcagca gcaggagggg atacattctc gaccgtcttc gccatgctga 901 acgatacgca aggcgaagag ctgtcgcgac caaaccgcag agtcctccaa tacggggcca 961 ctgccaaggg caagacccag gacgatcaga atgtcggcaa gcgacagaag aagaaaaaga 1021 caaaatacga tacctgggaa gatagcgatt ttaatgatct cgacgacgca tcattgaaga 1081 aacttctcga ggaggcatat tggtatcgaa atcctggcga caggaagaac aagagcgagc 1141 gatttctgca aatgctcaaa aaggctgagt acgacgagga gatctcttat cgtgccatca 1201 aatcctgcct cacactcaac ccatccgcac tagcgtccag tgcagcagcg gcggcagcag 1261 gctcgagcgg cgggggcagc agcagtgcag ggcacaacag cggctacagc tccacctcca 1321 cctccaccaa tcaccggtcg acggatcccg gccagcagcg gcacaagcag ggcggctccc 1381 tgcaggatct cgtcgaggcg gcgcaccgca gtgagctggc caccacctcg gcggcggcgg 1441 ctgcagcgac ggcggcggca agccaacgtt tcaactgtga ttaccagctg agtggccgct 1501 ccaatcgccg ccagcagcag cagcagcagc agcacaacca aaacgccacc tcctccgcaa 1561 ctgcatccgc atctaagaag atcaagaact catccgtctc gggccggcag cgcgaaggag 1621 gcagcctgcc cagcagcgtt aactttgagc cggcagctgc catggatgcc aagcagcagc 1681 agaagcagca gcagcaggag ggatccggat catcggcagc aggtggcagc aagaaccaca 1741 gctgcagcag cctgcccagc catctgggcg atcgggatcc cgaggcgggc atccagttcg 1801 acatggacga ggacgaggcg acgggcggcg tcgccattag cggcgtccca cacgactacc 1861 tgttggaggt aagcgatgat acgctcaaga ggtgggacct ccgaatggac ggcagtctct 1921 gggagatagc aagggccctc gttaaagcag atttaagcga taaggcgcaa ttggagcccc 1981 agaatccctc gatgacgttc ctgctcgacg ccctcagtgg ccagcagccc aagcagccga 2041 agcagccggc ggaggcccgg gaaggcggtg ccgccaaaga gttcctaatc gacgacccgc 2101 tgcacttctc cgtcctggag gtttcggcca ggagccagct gcagcagcag gcccactatc 2161 tggccgccct aaccgggcaa ttcggtctcg ggctggagga gcagaagcgc aaggtggagg 2221 ccggctatgt gtcgctcaac gacaactaca cggcctgctc ctcggtttac ggcggcggcg 2281 ctggttcgcc agctgccatc gagggcagca agccctcgac ttcctccgcg acctcttccg 2341 gcggcagcaa ctgcggcggc ggcgcctcct cctcctccga cgcgctctcc ggcgagctgc 2401 gtcccgcgaa gattggacgc atggtcgctg gagcagcgtc gacggcagct gcgtcgatgg 2461 gtggcaaggc cacaacgcgc cagctggacg agaatggcaa tgccttgagc gatggctttg 2521 gaggagccac tggagtggcc accagcagca atggaaacca gttcacggcc ttgataacca 2581 ccacagtggg cggcagtgcc accacctcct cctcgtcggc cgcccaccgt cagaatagcg 2641 tgtccacgct gctctccacg ggcacgaaca ccaccaccac ggccatggca gccgcagcgg 2701 tggctgcatc ctacagccag ctgcaacagg cgcccagcgg tggagctgtt gctgccgggc 2761 cgggaatagg cattggcatc cagcagaatc ccaccaagca gaaggccaag aagaagtcgc 2821 agcaggagag gaatacgacc accgtggacg tggagtcggt ggccggctat cggggcaacg 2881 atcccgtcga gcagctggtc aagtacatcg agaacgatgt gaatggcgga ggcgggaaca 2941 ctgcagcggg gcagcgcaag aaggagcgca agaagcagaa caagctcaag aagagcaact 3001 cgctggagga gctgcgcagc tgctcgaaaa tggaggtgga cgatttgaag cgccagtcgg 3061 cgaccacgga gatgatgcgt cagaagaagg gcccaaataa tgctggccca agcggcactt 3121 cctcctccgc cgccgccgcc ggtggcaagc acaattcggc ctccgtggcg gacataaaca 3181 agaattgcaa caaggagcag cagcaggtgc aggtgcaggt gcggaattcg agcagtaatc 3241 cgggcggaac gcagcagcgg aagggcgagc ggcgatcgtg gggcaccgag gagctgcagt 3301 acctgggcga ccgccaggaa atgtctgcag cctggtcgga acccgaatcc ctggcccaga 3361 agccactcac ttcgctgccc gccttaacgc gcatgtccga gctggacgcc ctgaacactg 3421 tgctctccga aacggccgag ttccatgtgg tgaccaagaa gaagaaacca aagaagcaac 3481 gcgccgtcac catggacgat gcggcggtgg cggtggcggc ggcggccacc acgggtggca 3541 atttgcagcg catgcagcag atcaccaagt cggcctcctc gaacatgatg tcccagcgga 3601 tgcactacta caccagtagc aacaacaacg gaggaggagc aggagtagct acctacaagc 3661 agcagcagga gcactaccag gcgcagcagg gccagcacca tcatcatcat catcatcacc 3721 accaccatca tcaccatcat ggcggctcgg cggtttccaa tcaggtggat ggatcgcgtc 3781 gcaagtccac ctcctccatg ccgccgtcgg agaagtccga ctccagtgat ctcgactcgg 3841 tccactcgct gcccatccag acgggcaaga agaagagcct gggcggcggc ggcggcaaca 3901 acaagcagcg ggcggcgcag gccgccagtc agcggcaggc gaagcaaaat aatagctcac 3961 cggcgcccat ttcgtatgcg gatattgcgc gcaacaagca ggaggctttg aaccaggccg 4021 cggccagcga cacggaactg gagctcaagg gcagcaagtc caagtcgcgg cccgactttc 4081 cagagctgcc agcagggaat cagcagcagc agcaaccgat cgttgtcagc aatcaaaata 4141 cggcgccgtc ctcgtccagt tcgattagct actcgcagag cctgaatgcc acgcccgcca 4201 gcagcagcag cgatgcggag tcgctcaact ctccagagct ccaagtggta gcctgcagcc 4261 tggccacgtc cacgagcagc tgcggcagcg gcagcagcag cagcagttcc agcgccagca 4321 cctcctccac agcctcctcc tccgcctcgc cgcccgcgct gcagaagtcg aagagcgtgg 4381 agcacgacgc cagctacagc tgcacaagca gcaacctgga ccagcagtat ccggcgctgg 4441 agaagaccgt caagcggcac agcaccaaca atgtgtccgt ggccgtcgcc tcctcctcgg 4501 cttcgctgta caactttgca gcggcagcca agcagcagct ggcggagaaa gccgctgcag 4561 caacaactac tacctcaact gcagtttcag ttccagctgc tcctggttcg tcctcgactc 4621 cctcgcctgc tgtcaagttg aaggccaagc caaaggagct gtctcccagc agcagcagca 4681 gcagcaagaa gcctcctaaa gaggaggcga cgtcgtcttc gtccaaggcg accattagca 4741 ccagcaccac gaccacgacc acgcaaaaga ccacggctgc cacgcagacc gagggagcca 4801 agaagctcag cagcagtagc tgcattgcca agggagccgg tgccgttttg gaggccaccg 4861 ccggcaggag ggcggtgatt atactcaacg atgatcgcga ggcgggcagg agcaacaacg 4921 agttcatttt cggggacttt aacgaggatg agctgaagct gttcgacgat aatttagagg 4981 atgaagtgca ggccgcgaat aagcagcagc aaacggaggc ggaagatgag gcggaagatg 5041 cagatcaaac agaagtggag agccgggaaa aggaatcgca gcagctgaat gattcggggg 5101 ccgcttcaga tgcagtcaac agctcggcca gcctggatat gctctcgatt tcggcggaga 5161 cgggacaatc gtcgccgagc gccgccagtc tgattaactc gtccacgccc tcgggctctt 5221 cgtccgcgtc ggccagcacc tccacctcgt cgtcctcgat ttcgtcctcc tcctcctcgg 5281 gcagcaacgg caacggcgcc gcctgtctgg cctccatttc gggcatgctc ggccaatcag 5341 tggccaatca gtcgggggat agcggcatct atgccgcagc caatacgtcc atcaaggagc 5401 aggtcaacaa tttcctcagc aaggcgagca gcagcgagga gacgctgccg agcaccaact 5461 cgatttcgat gcagcaactg gagacgtgca acgacattga ggcggccatc atagccgccg 5521 cccgtgcggc agccgctgcc cggagcacca gctgcagtcg cagcaactcg caggagcagg 5581 agcagcaggc caagacaatt aggtcgaatt caaatacaaa ttcaaatccc aatcccaatc 5641 cggagacgaa agtagccctg cccgtgttta tgaactacaa cgacgacgac gaagaggacg 5701 acgagagctt gcaggaactg agcttcatgg cggaccttaa ggatgctgcg gccacgacgt 5761 ccgcggaggc ggaggctcag gaggttactg tgctgccgcc gccgccgccc tcgcgaccgg 5821 cgatgatgac caacacggaa ctgattgtcg actacatcgc caacacctgg aatgccattg 5881 ccaatagcaa gtatgtcaca tactacaacg agcgggagca ggagacctag aaatcagatc 5941 agcaacagca gcagcagcag caacagcaac accaatcgca atagcaacgt cagcaatatc 6001 ggcagctgag aacaggagag aggagtttag ttcgaattgc atgttccgat gtttatattt 6061 cacttttttt ttttttactt tgtgctgggc catcgtttat acatctaccg atatcgtaca 6121 tacactataa ataattgcta taacaatacg cttttatgct aattaatgta acgaatcaat 6181 ggattcgagc gcggcagcgg aggatcagga ttgtcaggat tgcaggattg tcaggattgt 6241 cagggtgtgt ctgtgtttcc agtatgaatg cgagcgagtg cctgagatta ggagtatagg 6301 atctatttag atgcaggtcg ataatcgcca ggagaagatc gaacacgaac cctcaaaccg 6361 ttcgtacagc tgtgaataag aagggaaaca ttactaggaa agaggaaatt agaagagaaa 6421 gtaatcagaa gatcagagga tcgaaaacaa gctacaagtg gatatttatt taacgttagt 6481 tgaccgcgat ttaacgatgc gatgcatagt gatgttcaat caagcatttg gatctgcttt 6541 tgttaattta caaccttctg gctccttaaa acgcaacgtt ttaccattac tattactatt 6601 actgtacttt aattattatt actactatta cgcaagcgtt tttttttgtc tttgtttttt 6661 aaacgcccca cgagatcatc ggagggcgtg ctatattgca aaagcagaaa ttaaaactaa 6721 tcctagttct tagacagagt caacgtcgcg tgtacatata tatatgagac cagaagttta 6781 ggaggcagtt cgaccattga gtttatgtgt tagagagagg aaagaaagaa agaaagaaag 6841 ccccacggaa aatatttgat atgtgtgtgt atgataacga ctatttaaag taaactatgt 6901 aaggcccgct ccttagctcc ggctagccat aaataagcct catgaggaaa gtatgttaga 6961 cagcataacc gcaaaacaga aaacagaaaa ccacaaaaaa ccagcaaaaa cactaaaaac 7021 tattatgcac ttacgaaaaa tgccgccgtt tagcagggag agcctcagaa ggtctctccg 7081 aagggtaaaa aataaaagaa ggatagtaga tatcgtaacc attaaaacag aaaatcgtaa 7141 aaaaac