Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218816 7452 bp mRNA linear INV 09-DEC-2024 channel-like (Cngl), mRNA. ACCESSION XM_070218816 VERSION XM_070218816.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7452 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7452 /gene="Cngl" /note="Cyclic nucleotide-gated ion channel-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108070370" CDS 215..6061 /gene="Cngl" /codon_start=1 /product="uncharacterized protein Cngl" /protein_id="XP_070074917.1" /db_xref="GeneID:108070370" /translation="MKLSVSAYRAHASAHKKILSSGYHSQLNYGSTGAAAASSSSSGA TATGLYAMEAHELEAGKFVKDVARQVHDCNSDTDVISPTGTSSSGGGGGGGGGGGGGG GASGGSGGAGGHGGPSDGGYHKRHHKMVRDDDNNSAAHSSDSKSPSQRKSRIGDGASD PDSDWTRSNQRWMKLRTTVQISSAIQKKPPLKREDSFLKRFSTRQIPETQETVEDTGS ESASGDVDKSVKRRRRYLQKRRSVVNPDENFYFYWLMMLTVCVLYNLWTLIVRQSFPE LQQSVPTFWLICDSMTDVVFILDIIVQLRTGYLEQGLMVYDDRKLACHYVHSRDFIFD MIALIPLDLLQLKMGTHPLLRFTRFFKVYRSVRFYYIVESRTVWPNLWRVVNLIHILL ILAHWFGCFYFLLSEAEGFQGDWVYPYRPGDYATLTRKYLGSLYWSTLTLTTIGDLPT PETNAEPNFSVDGPRSIPRRGIKSRLLQFGSSYGYIFTIVSYLIGVFIFATIVGQVGN VITNRNANRLEFERLLDGAKTYMRHHKVPGGMKRRVLRWYDYSWSRGRIQGGGDINTA LGLLPDKLKTELALHVNLSVLKKVTIFQECQPEFLHDLVLKMKAYIFTPGDSICRKGE VAREMFIIADGILEVLSETGKVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYSEL FSLSREDVLAAMKDYPDAQEILQTLGRKRLMEVRCVNKKYAKAQSDKEAAAYAAAHPH HHQGHHQGQVHQSDSSENSASKKIVDKLKHDVKGFRNVLKKSRTSRKSDESLEMQPLH NTSPRGSKILLKRMSRVRSDEKDADSAEAKDELHDKTPSPIGAGLPLLQRLRLLKEKQ ESIQEEPEREFSEGFPLIQRLQQLKIKNEPQANAAEPGVVMVNTPPNISSKIDSIGTG NGGGLGQSLTVAQIKPIMKVSFKQKIQQMQGGGGGGGGASSSPAASTGAIAKKEPPKS LALVAKHVTTEDPVVTAGLGMGLGSGIATISKRVVKPTAGPTHRMATPLQSDTDTDGT PIKPWSKLKLATLMSSSYTSLTNCSPDDLVMTSSPLKNYSLSNIPQQMDGSHQQRPRH HSARSSARSPRHSHGHHHHQHPHLHPHSHPHHPQQQQAASSASNQSNGSLTTSQKRDC LRLQKPEQHLPDGELTELSGNGGRRKLYQSVFDLSPEYCGLPFVKRLKILNERQKLAE LERALQTRSFSLDCSKSATDSKVPITESLYRCYSDTSGIYSQFLSTYESTTSSASIST NTSASASASASASASASASDSNSRQLQYVPLPLSPESNETMERRKLKSILKKLQMGGG QEEEAAAVAAGSAVTGGQRSGQGLMAEPTLEGPPASAKEELESPLGSGLGLGAGSVTG SVNNGNDNSANSRSNNNSAYACSSPSSPRAFPFPVPPVIASSGLGSGSNTPQESAQLK AGELGGTGKVVPPAAGASGLSASASASTSASASYVVECSSSSLSSSNQILHAQSTTDL NLNLQLRQNTTSATSMGGTVPGPRLEGFPEAQDYFNQILSGINHVIKTHMNEMHSKFE TQFSSMAGEVRRRDAIIAQLQLKLRSIEGRSSAQAASTSSSLVLPLSRRQKREKMSQL SVDDDEPPEEEDNSSSGSSAELLFMRGDSLDTVFTSSPPIGGGRRSISPGPSRHHAAS ANALNCPSSYYGGPGGSLSLSSRHAQSHPSFYSGQSSQQGNGRSGRSSSGYREWSGGG GGGGGGGGADSGSNSAVMVADVTGNLARLSDSVILDIGESSSSSSSSSKINMAEVEDD DDDDEEEEELDPAARLPGEDEDLNDTGGRSASHNDWEVRMLAAEMERQERKRGHSLNP DNLGELRHCSTFLRRRRKFSDTETEFSETDMEEQLARSRSSVDPPTTTTGGGASGSGG ATSTSTSLGHQSGSQRPRASSLDQFNLRYGIGRGIFKAMSIDRDKDKL" misc_feature 956..1765 /gene="Cngl" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 1988..2326 /gene="Cngl" /note="effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO...; Region: CAP_ED; cd00038" /db_xref="CDD:237999" misc_feature order(2183..2188,2222..2230) /gene="Cngl" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:237999" misc_feature order(2288..2296,2306..2314) /gene="Cngl" /note="flexible hinge region; other site" /db_xref="CDD:237999" ORIGIN 1 cagcaacagc aacagcaaca gcaatacaag ctgcaacagc agcagtgaag cgaccacgcc 61 cccgcccaca cacacagttc acattcagat tcagtttcag tttcagtttt gggaattccg 121 gggcggaaaa aggagcaatt gccacgccca cctccaccca taaccaccca ttgccaccca 181 acacccacag atggttggtt gagtggatgt caggatgaaa ctgagcgtga gcgcgtatcg 241 ggcgcatgca tccgcacaca agaagatcct ctccagcggc tatcactcac agctcaacta 301 cggcagcact ggagcggcag cggcatcctc ctcgtcgtcg ggggccacag caacgggcct 361 atatgcgatg gaggcccacg agctcgaagc gggcaagttt gtcaaggatg tggcccgtca 421 ggtgcacgac tgcaacagcg atacggacgt catcagtccc acgggcacca gtagttccgg 481 cggagggggt ggcggaggcg gcggcggagg aggaggaggt ggtgccagcg gaggatccgg 541 tggtgccggc gggcacggtg gtcccagcga cggcggctat cacaagcggc accacaagat 601 ggtccgcgat gacgacaaca acagtgcggc gcactcgtcg gacagcaaga gtcccagtca 661 gcggaaatcg cgtatcggag atggagcttc agatccagat tccgattgga cacgatcgaa 721 ccagcgttgg atgaagctgc gcaccaccgt gcagatctca tcggcgatac agaagaaacc 781 accgctcaag cgcgaagatt ccttcctgaa gcgtttctcg actagacaga tacccgaaac 841 acaggaaact gttgaagata cgggttcaga aagtgcctct ggtgacgtcg acaagagtgt 901 taaacggcga cgacgctatc tgcagaaacg acgatccgtt gttaatccag atgaaaattt 961 ttacttctat tggttaatga tgttaactgt atgtgttcta tataatctat ggaccctaat 1021 tgtgaggcag agctttcctg aactgcagca atctgtgccc acgttttggc tcatctgcga 1081 ttcgatgaca gatgttgtat ttatcttaga tataatagtt caattacgca caggctatct 1141 ggagcagggc ctaatggtat acgatgacag gaagctggcc tgccactatg ttcactcgcg 1201 cgactttatc ttcgatatga ttgcgctgat accattggat ttgctgcagc tcaagatggg 1261 cacacatccg ctcttgcgtt ttacgcgatt ttttaaagtt tatcgatctg tgagatttta 1321 ttacatcgta gaaagtagaa cagtttggcc aaatttatgg cgcgttgtta acctaattca 1381 tatcctgtta atattggcac actggttcgg ttgtttctat tttttactct ccgaggcgga 1441 gggttttcag ggcgattggg tctatccgta tcgacccgga gactatgcca ccctgacgcg 1501 gaagtatctg ggcagcctgt actggtcgac cctgacactg acgaccatcg gggatctgcc 1561 cacgcccgag acgaatgcag aaccgaactt ctcggtggac ggccctcgat caattccgag 1621 gcgtggcatt aaatcgcgcc tgcttcaatt cggatctagt tatggatata tttttacgat 1681 cgttagctat ttgattggtg tttttatctt cgccaccatt gtgggccaag tgggcaatgt 1741 gataacgaac cgaaatgcga atcgcctgga gttcgagcgc ctgctggatg gggccaagac 1801 gtatatgcgg caccacaagg tgcccggtgg gatgaagcgt cgcgtgctgc ggtggtacga 1861 ctacagctgg tcccgcggac ggatacaggg tggcggtgac atcaataccg ccttgggcct 1921 gctgcccgac aagctgaaaa ccgaattggc cttacatgtc aacctcagcg tgctgaagaa 1981 ggtgaccatt ttccaagagt gccagcccga gttccttcac gatctcgtgc tcaagatgaa 2041 ggcctacatc ttcaccccag gcgactccat ttgccggaag ggcgaggtgg cccgcgagat 2101 gttcatcatt gccgatggca ttttggaggt cctcagcgag acgggcaagg tcctcaccac 2161 catgaaggca ggcgattttt ttggcgaaat cggcatcctc aatttggacg ggctgaacaa 2221 acgcacggcg gatgtgcggt ccgttggcta ctcagagctt ttttcgctgt cccgcgagga 2281 tgtcctggcg gccatgaagg actatccgga tgcccaggag atcctgcaga cgctgggccg 2341 caagcggctg atggaggtgc gctgcgtgaa caagaagtat gccaaggccc agagcgacaa 2401 ggaggcggcg gcctatgcgg cggcccatcc gcaccaccac caggggcacc accagggcca 2461 ggtgcaccag agcgacagca gcgagaacag tgcctccaag aagatcgtgg acaagctgaa 2521 gcacgacgtc aagggctttc ggaatgtgct caagaagtcc aggacctcgc ggaaaagcga 2581 tgaatccctg gaaatgcagc cgctgcacaa cacctcgccc cgcggcagca agatcctgct 2641 gaagcgaatg tcgcgcgtgc gatcggatga aaaggatgcg gacagtgccg aggccaagga 2701 cgagctgcac gacaagacgc ccagcccgat tggggcgggg ctgccgctgc tgcagcgcct 2761 tcggctgctc aaggagaagc aggaatcgat ccaggaggag cccgaacgcg agttcagcga 2821 aggctttccc ctgatccagc gactgcagca gttgaaaatt aagaacgagc cgcaggcaaa 2881 cgccgccgaa cccggcgtcg tcatggtcaa cacgccgccc aacatcagca gcaagataga 2941 ttcgatagga actggaaatg gtggtggcct tggacaatcg ttgacggtgg cccagatcaa 3001 gcccatcatg aaggtctcct tcaagcagaa gatccagcaa atgcagggcg gcggcggagg 3061 aggaggagga gccagcagtt ctccagctgc gagcacggga gccatagcca aaaaggagcc 3121 acccaagtca ctggctttgg tggccaagca tgtgactacc gaggatccgg tggtgacagc 3181 tggattggga atgggattgg gctccggcat agccaccata tcgaagaggg tggtcaaacc 3241 caccgctggt ccaacccatc gcatggccac gcccctgcaa tccgacacgg acaccgatgg 3301 gacgcccatc aagccgtggt ccaagctcaa gctggccacc ctgatgtcct ccagctacac 3361 gagcctcacc aactgctcgc ccgatgattt ggtcatgacc tcgtcgccgc tgaagaacta 3421 ctcgctgagc aatattcccc agcagatgga tggctcgcat cagcagcgac ctcgtcatca 3481 cagcgccagg agcagcgcga gatcacctcg ccatagccat ggtcatcatc atcatcagca 3541 tccgcatttg catccgcact cgcatccgca tcaccctcaa cagcagcagg cggctagctc 3601 cgccagcaat caatccaatg gctcattgac caccagccag aagagggatt gcctgcgtct 3661 ccagaagccg gagcagcatc ttcccgacgg cgagctcacg gaactgagcg gcaatggagg 3721 tcggcggaag ttgtaccaga gcgtctttga tctatcgccc gaatattgcg gcctgccgtt 3781 tgtcaagcgg ctgaagatcc tcaacgagcg ccagaagttg gccgaactgg agagagcgct 3841 gcaaacgcgg agtttcagcc tggattgctc gaaatccgca acagatagca aggtgcccat 3901 cacggagtca ctgtatcgct gctatagcga tacgtccggc atctattcgc agttcctcag 3961 cacctacgag tcgaccacca gctccgcctc gatatccacc aatacatccg catcggcatc 4021 cgcttcggca tccgcatccg cttcggcatc cgcatcggat agcaattcgc ggcaattgca 4081 gtatgtaccg ctgcccctga gtcccgaatc gaatgagacc atggagcgca ggaagctgaa 4141 gagcatactc aagaagctcc agatgggcgg tggtcaggag gaggaggcgg cggcggtagc 4201 ggcgggatcg gcggtaacgg gtggccaaag gtcaggccaa ggtcttatgg ccgagccaac 4261 cttggaaggc ccgcccgcca gtgccaagga ggagttggaa tctcccttgg gttcgggttt 4321 gggtttgggt gcgggttcgg ttacgggttc ggtgaataac ggtaacgata atagtgctaa 4381 ctcgcgttcg aacaacaaca gtgcgtatgc gtgttcttca ccttcttcac cgcgggcgtt 4441 tccgtttccg gtgccaccag ttatcgcttc ttcaggatta ggatcaggat cgaatacgcc 4501 gcaggaatcc gcccaactga aggcggggga gttgggcgga accggcaagg tagtgcctcc 4561 agcggctgga gcatctggct tatccgcatc ggcatccgcg tccacatccg catccgcctc 4621 gtatgtcgtc gagtgctcgt cgtcgtcgct gtcgtcgtcg aatcaaatcc tacacgccca 4681 gtccaccact gatttgaatt tgaatttgca gctcaggcag aacacgacca gtgcgacgtc 4741 catgggcgga acggttcccg gtccccggct cgaaggcttc ccggaggcac aggactactt 4801 caatcagatc ctcagcggca ttaatcacgt gatcaagacg cacatgaacg agatgcactc 4861 caagttcgag acgcagttct ccagcatggc cggcgaggtg cgacgtcgcg atgccatcat 4921 cgcccagctg cagctcaagc tgcgctccat cgagggcagg tcctcggccc aggcggcatc 4981 cacatcctcg tccttggtcc tgccactcag ccggcggcag aagcgcgaga agatgtccca 5041 gttgtcggtg gacgacgatg agccgcccga ggaggaggac aacagcagtt cgggatcttc 5101 agcggagctt ctgtttatgc gcggggactc cctggacacg gtcttcacct catcgccgcc 5161 cattgggggc ggcaggcgca gcatatcgcc gggcccgagt cgccatcacg ctgcctcggc 5221 gaacgccctg aactgcccga gcagctacta cggcggaccc ggtggctccc tctccctcag 5281 ctcccgccac gcccagagcc acccgagctt ctactcgggg cagagctccc agcagggcaa 5341 cggacgcagt ggtcgcagta gcagtggcta tcgcgagtgg agcggtggag gaggaggcgg 5401 cggcggaggt ggaggagcgg acagcggatc aaacagtgcc gtcatggtgg cggatgtgac 5461 gggcaatctg gcccgcttgt cggacagcgt gatcctggac attggcgaga gctccagttc 5521 gagctcctcg tccagcaaaa tcaatatggc cgaggtggag gacgacgacg acgacgacga 5581 ggaggaggag gagctagatc cagcggcgcg tcttcccggc gaggatgagg atctaaacga 5641 cactggtggt agatccgcta gccacaacga ctgggaggtg cggatgctgg ccgccgaaat 5701 ggagcggcag gagcgcaagc ggggccactc cctcaatccc gacaatctcg gcgagctgag 5761 gcactgcagc actttcctgc ggcgccgccg gaagttcagc gacaccgaaa cggagttcag 5821 tgagacggac atggaggagc agctggccag gtcgcgatct tcggtggatc cgccgacgac 5881 gacgactgga ggaggagcct cgggctctgg aggagccacc tccacatcca cttccctggg 5941 tcaccagagc ggcagccagc gtccgagggc ctcgagcttg gatcagttca atctgcgcta 6001 cgggatcggg cgcggaatct ttaaagcaat gagcatcgac cgtgataaag acaagctttg 6061 agaactataa tcacgaccaa atcgaaaacg aaatcttacc agttccccag atgcccattc 6121 ccaaaaccca accccaacca atcgcaacca gaagcaagtt acaaccgcag acaaccaata 6181 agcaatggaa ttaggacagt attaccgtgg tacaagaact atgtatatgt atatgatata 6241 aagaaaaatg aaaactaagg atatgtgagg acatatagat ctatattcta tatatgttta 6301 gccctaacga aaaaaacgcc cccagcaaaa agagatcgat atatacagat atacacgtat 6361 aaagtaaagc ccgaatgaga tatatatata gatatatata tatatataaa tgaaatgtag 6421 aattaacgaa agcaaactac tactaaaaac cgagaaacaa cacacaaata gccagagagt 6481 gttcccaccc ctgttcgaaa tcatcatcct aagcactata cccattttaa ccggaggtta 6541 tctttgtccg cttaagggag ctttgtccgt ttgaaatttt ttactctttg gttaacgtat 6601 taaatttaat ttataaattc ctagctgaat tcaaattata aactagttgt ccgttagtta 6661 atttaactgt tacttttcct tgttccggtt aaattcttct aaaattcgtg tgaccttgtg 6721 agtgagtgtt tgcaagtgtg tgtgtgctag aaagagatga taattcccac attaaaccgt 6781 cctgaaaaac gtccatgccc acgatgtgca tgtttgttca ttttgtatgt atctgcaact 6841 ctgcaaccac tgtgcatccc aattatctgg atccaaaccc aaatcagctt tcagtttagc 6901 ttgtggacaa cgggggcctg ggtctctcta cagatgtata tacctcttat tgttagagac 6961 tatggaacat atatatacat atatatttta agtacgtaca tatatatata tacacagaaa 7021 tatacatagt tatatatcta tatatgaact agtgtaatga aaaccgaaag ctttaataac 7081 atatatagag aactatttaa gaaacatttt aaatactaat cgattcggac aaatgttttt 7141 gaaatagaac aggccaacaa cccatttcca aaacgaacaa acaaagaaac aagcaaatac 7201 accaaaaaga cacatacaca taaggcatac ctacacctgc atacgaatat ctaaatatag 7261 agcctataat atgcgtagat tagcgattta cttgttacaa agaagaacac cctcagttcg 7321 agctgttaag cctatctaag cgttagtcga acctatcgaa aacttagact agccccctct 7381 atcctacgat cctacgatcc tacgcccatg catccattcg gtttcgttca cccgatctca 7441 cgcttgccct tt