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PREDICTED: Drosophila takahashii uncoordinated (unc), mRNA.


LOCUS       XM_070218809            4329 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_070218809
VERSION     XM_070218809.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4329
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..4329
                     /gene="unc"
                     /note="uncoordinated; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:108062276"
     CDS             185..4207
                     /gene="unc"
                     /codon_start=1
                     /product="uncharacterized protein unc"
                     /protein_id="XP_070074910.1"
                     /db_xref="GeneID:108062276"
                     /translation="MKTRQLPATTTTVSFRAKQRDVVGGMSRLGMPCERERKHEAAKR
                     EREEREEQLKRDKATAAAAAAAQRVRLHNRRTGVGGVDGDLGKPRRNPYLKGIVQRAA
                     GLGGAPNVTGVRTGKFANRAVNASEDRKDEQDEYDVKADRLRQQLEELAAMSEQEFEV
                     KFRQWLDQEGIAREMHSHLRVELIHCFNNTALGQLLSKAAGVQMAHSHALLLSPLAMI
                     LHTLVAEFLHSQNCHFTLSVFCSETPHRHKLPDFSRRPEFRFRQEELQQVLTAVLGGE
                     DSPEDPEFNQLVVSHYEEDLAGQTQCLLMALLRSLVEIRTRNSEKEKEEVIPVISTIP
                     ASLQDSACQTEPMHSPFLAAHSEVDTSNLYQAEEHELILGADGRSVFVGGRVSQSLHS
                     VEQQLSQLMRNLRQLAKSCAPPIEVISAARFENLLQKELAERERLLKAGQAFDPSETV
                     TKLAKPVEEKEEEQPAGPRDEVVQSDVGPIQLPVLDVAIPRLPYLQSEQLASLAVIRQ
                     SLEKVQRKARQPQGRMYVSMERMENLMGDIATCVQLLGNVLNLSMEQEHAVGLHKGFK
                     TGYREGFAHGHFMGLQEGQKQEQFDQRKRERERQRREIGTQVEVRRPTVHCRGSQTSR
                     RSTHLANSHTQTKEKNLKDAANQANLLLEPSQKSYEQWIHEMLHSSSGQVFLERVELS
                     LKKALELQKERLDELFQVKLRHQAEMLRLSRRQNSWRTLCKRVERDSQSSTEARDLVQ
                     KIFRLLEHYESHHQQLAEKIQQTEIAAEQAARILPLWAEEQGQGVDGNAAPGNWNSAM
                     STTPTSSGMRTPAPPDPPAPPATAPAPPLERLGYPYQLLALGPPGGIPVAGAFVSVNP
                     RLSVHFARDLEQPPRSRPTVPPEKPSDTKPSTPRNDNIPREPAAPKVPPVPAPRDPKP
                     SPEVSALPSNASISDVPPAPSDPPKPSMHSVATNTMAPPAVPPKMTPLKQSSRQSPTG
                     PSFEEALLSAKNRMLQLEQESDLLEQSFLSYLEKAKSKSGAPKGGATEEASSASIRSR
                     RIRSSCLRERDQMNRTLDGFRDWHRRVRKEDAASLAQLEELQQQRIIPEPKVSSSPLW
                     LSELEEGHEPDSYPFTNAISEARSKLLGKIMPEEQAKDKKKQVDWLPTEVPVPEVLDP
                     VKPPELNRLLAEITPDLTRSSSNGEMSLLLQRAKDALGMNNNNNKATHRLLDDSSSSS
                     SSSSSSLELPSRSPSTKLQQSMAKMQLLFGGAVDPAKPIPARRTGRPVSAPTSGLESG
                     LRDHLTLPQRPHTAPTLQAISEQNESPILQLDVSTSSSSQRTAGEAFEDLVTSAVKPM
                     HHESSPEVSYSQAFWKRMNL"
     misc_feature    839..919
                     /gene="unc"
                     /note="Region: LisH_2; pfam16045"
                     /db_xref="CDD:464992"
ORIGIN      
        1 tgcctcgtcg cacctgtcac atttcgccgg tggtggtgag tgtgtctcgc gcttgcctca
       61 cctggaaatt tcagtcactc gcagtaacgg cgaaagaaac gcgcgccggt cggaagatca
      121 caccgctata tatatatatt cctgattcct gagccctgat cccatacatc cctcgaatcc
      181 tccgatgaaa acccgccagc tgcctgcgac cacgacgacg gtctcgtttc gagccaaaca
      241 gcgggatgtt gtgggcggca tgagcaggct ggggatgccc tgcgagcggg agcggaagca
      301 cgaggccgcc aagcgggaga gggaggagcg ggaggagcag ctgaagcggg acaaggcgac
      361 ggcggcggca gcagcggcgg cacaacgggt gcgtctgcac aatcgcagga caggagttgg
      421 aggagtcgat ggagatctcg gcaagccaag gaggaatcca tatctcaagg gaatcgttca
      481 aagggcagct ggactaggag gagcaccaaa tgtcacagga gttcggacgg gaaaatttgc
      541 caatagagca gtaaatgcaa gcgaggatcg aaaggacgag caggacgagt acgatgtgaa
      601 ggccgatcgc ctgaggcagc agctcgagga gctggccgcc atgtcggagc aggagttcga
      661 ggtgaagttc cgccagtggc tggaccagga gggaatcgcc cgggaaatgc actcacacct
      721 gcgggtggaa ctcatccatt gcttcaataa tacggcactc ggtcagctcc tcagcaaggc
      781 ggctggtgtg cagatggccc actcgcacgc cctcctcctc tctccgctgg ccatgatcct
      841 gcacactttg gtggcggagt tcctgcactc ccagaactgc cacttcaccc tgtcggtctt
      901 ctgcagcgag acgccgcatc gccacaagct gcccgacttc agccgtcgtc cggagttccg
      961 tttccgccag gaggaactgc agcaggtcct gaccgccgta ctgggcggtg aggattcgcc
     1021 ggaggatccc gaatttaacc agctagtggt ttcccactac gaggaggacc tggcgggtca
     1081 gacgcagtgt ttgctgatgg ccctcctgcg atctctggtg gagattagga ctagaaactc
     1141 ggagaaggag aaggaggagg taatcccagt tatttcgact attcccgctt ccctgcaaga
     1201 ttccgcctgc caaacggaac ccatgcactc gccctttttg gcagcccatt ccgaggtgga
     1261 caccagcaat ctctaccagg cggaggagca cgagctaatc ctgggcgccg atgggcgaag
     1321 tgtctttgtg ggcggccgcg tctcccaatc cctgcactcc gtggagcagc agctcagcca
     1381 gctgatgcgc aatctccgcc agctggccaa gtcctgtgct ccgccaatcg aggtgatatc
     1441 cgccgccagg ttcgagaatc tcctccagaa ggagctggcg gaaagggagc gcctcctgaa
     1501 ggcgggccag gcatttgatc ccagcgaaac ggtcaccaag ttggccaagc ccgtcgaaga
     1561 gaaggaggag gagcagccgg cggggcccag ggacgaggtg gtccagtccg atgtgggtcc
     1621 cattcaattg cccgtcctgg acgtggccat tccccggctg ccctacctgc agagcgagca
     1681 attggccagc ctggccgtca tccggcaatc cctcgagaag gtgcagcgaa aggcgcgaca
     1741 gccgcagggc aggatgtacg tgtccatgga gcgaatggag aaccttatgg gcgacatcgc
     1801 cacctgtgtc cagctgctcg gcaatgtcct caatctctcc atggagcagg agcacgcggt
     1861 ggggctgcac aagggcttca agacgggcta ccgcgaggga ttcgcccacg ggcattttat
     1921 gggcctgcag gagggtcaga agcaggagca gttcgaccag cggaagaggg agcgggaaag
     1981 gcagaggcgg gagatcggca cccaggtgga ggtcaggaga cccactgtcc actgtcgggg
     2041 tagccaaacc tcgaggcggt caactcacct ggccaatagc cacacgcaaa ccaaggagaa
     2101 gaacctaaaa gatgccgcca atcaggctaa tctcctgctg gaaccctcgc aaaagtccta
     2161 cgaacagtgg atccacgaga tgttgcacag ctccagtggc caagtgttcc tcgaacgggt
     2221 cgagctctcg ctgaagaagg ccttggagct gcagaaggag cggctggacg agctcttcca
     2281 ggtgaagttg cggcaccagg ccgagatgct gcggctcagc aggcgacaga actcctggcg
     2341 gacgctgtgc aaacgtgtgg agcgggactc gcaatcctcg acggaggccc gggatctggt
     2401 gcagaagatc ttccggctgc tggagcacta cgagtcgcat caccagcagc tggcggagaa
     2461 aatccagcag acggagatcg cggcggagca ggcggcccgc atcctgcccc tttgggcgga
     2521 ggagcagggc cagggtgtcg atggtaacgc cgctcctggc aactggaact cagcgatgtc
     2581 gactacgccc acttcgagtg gaatgcgcac accggcacct ccagatcctc cagctcctcc
     2641 ggctaccgct cctgctcctc ccttggaacg cctgggatat ccctaccaat tgctggcact
     2701 tggcccgcca ggtggaatcc cagttgccgg cgcctttgtg tccgtgaatc cacgactttc
     2761 tgtccacttt gcaagggatc tggagcaacc gccacgcagc aggccaactg tacctcctga
     2821 gaaacccagt gatactaaac cttctactcc gcgaaatgat aatataccca gggaacctgc
     2881 tgctccgaaa gttcctccag ttcctgctcc tcgggatcct aagccatcac ccgaggtcag
     2941 tgctctgccc tccaatgcat ccatctcaga tgtacctcct gcaccttctg atcctcccaa
     3001 gccttcaatg cactccgtgg ccaccaatac gatggctcca cctgcagtgc cacctaaaat
     3061 gacaccactt aagcaatctt ctagacaatc cccgacaggt ccgagcttcg aagaggcttt
     3121 actgagtgcc aaaaatcgca tgctgcagct ggaacaggag agcgacctgc tcgagcagag
     3181 tttcctcagc tatctggaga aggccaagtc gaagtcaggc gccccgaaag gtggcgccac
     3241 cgaggaggca tcctccgcct cgatccgctc gcggaggatc cgctccagtt gcctgcgcga
     3301 acgtgaccag atgaatcgca ctttggacgg ctttcgggat tggcatcgac gcgtccgcaa
     3361 ggaggatgcc gccagtctgg cccaattgga ggagctgcaa cagcagcgga ttatcccaga
     3421 gcccaaggtc tcctcctcgc cgctgtggct atcggaactg gaggagggtc acgagccgga
     3481 tagctatccc tttacgaacg ccatctccga ggcgaggagc aagctgctgg gcaagattat
     3541 gccggaggag caggccaagg ataagaagaa gcaggtggat tggctgccca ctgaggttcc
     3601 agttccagag gtccttgatc ccgttaaacc acccgaactg aatcgcctgc tggccgagat
     3661 tacccccgat cttacgcgga gcagcagcaa tggagagatg agcctgctcc ttcagcgagc
     3721 caaggacgct ttgggaatga acaacaacaa caacaaggca acgcatcggc tcctggacga
     3781 cagcagcagc agcagtagta gctccagctc cagcttggag ctgccctcca gatcgccgag
     3841 cacgaagctc cagcaatcca tggccaagat gcagctgctc tttggcggcg ccgtcgatcc
     3901 ggctaaacca atcccggcca gacgaacggg cagacctgtg agtgcaccca catcgggatt
     3961 ggaatccggc ttgagggacc acttaacact gccacaacga ccccatacgg cgcccactct
     4021 tcaagcgatc agcgaacaga atgaatcacc catcctccaa ctggatgtct ccacgtccag
     4081 ctcttcgcag agaacggcag gcgaagcttt cgaggatctg gtcacgagtg ccgttaagcc
     4141 catgcatcac gaatccagcc cagaggtctc ctacagccag gcgttctgga aacgcatgaa
     4201 tctgtgaaat attcaatggg aaaaactcaa ttaatatgtt aaattttgtg acctaaaact
     4261 gcaatcgaaa acatctaaaa gttcgtggtt aaatattcaa taaactgcct tgaaatgtat
     4321 tatttcaat