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LOCUS XM_070218808 4234 bp mRNA linear INV 09-DEC-2024 (LOC108060281), transcript variant X2, mRNA. ACCESSION XM_070218808 VERSION XM_070218808.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4234 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4234 /gene="LOC108060281" /note="uncharacterized LOC108060281; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108060281" CDS 289..4089 /gene="LOC108060281" /codon_start=1 /product="uncharacterized protein isoform X2" /protein_id="XP_070074909.1" /db_xref="GeneID:108060281" /translation="MPNTERPRARPKLRNRNRIRARPATPEDVLENHLQKLFEEQELL HNLLISHRPGIKAQLEDLGGESNYEFDTQDEEADEEKQLNFKPVDENPKDFSGQPDNV ILAEDVEEDYSDPPKFEDLPILPPRIYPHCKNHITSAIPLPILVGKCTAPKVDGQGYD PPFLYPDFIAKNEKSRVKYIFTLVDSLVQQMERFLKLNEHSVGEGAKKKRPTGTVPKS KSQNQFKIDQVGHAKYTIIVKPRLREPKQHNQSKNHRLAKSKMPKSKPETNPELDLDL DLDCEFGMEHIEKFRANTVRDEKPGKSGTKKKVQEKPAENAEGAEKEEEEEDEDTEVE EEREEKVMLVKLKKQEPIFETILSRPPSKKDEYSYMSILEAGLAKARRKQLRREKKYG NVTPRPSTPSTRPCTPIEEPPAAPKTSKHSTFYELFAAQLDAGQLERSTLTPWRLLQA RGPPPLKSWQREIVRFVREYKKETKRRQRMKERVRMGKKPMAKRKPKTLLEEVLGKKG SRRELLHRKYHYVPIKLKKKRHRHYKAYKRQKEWFRAERQYKRILYLRIFRPDDLFKT KLTKREKWAQGRQFFNIRILDPVKPRKFPKTEVPEMPAEEEWSEDEEDPDASPRPMDK GQRLKNLLMESARLKRQEKLHHLVLPEDPLRAVYLPLLERRKSLVDNATEKIPEKEEP EKVEENQPEAVLETLDSARTFYSTSTTIELSNVPLSIATVSTLFYESKPPPIEAIEAK EAIENKAPEPIKKEKKAERKREKKERHHHRVGPKIRLPDDKAEFRRYFDLDGISLYIL KRMSKMKPKKSRPRIEGRVRISNYLTHFYWQRLRRDDPYFHWFVNEGFYPAHYLTKLK ELKDLQVQTNDQLDEEILQYIERMNKAVSEGEEKPLTLTWQMAHLMVTSYFCVLYHRA TSKRRPVEERSLVRCRIAVSVVELYQQELSRGWGKDIRVNCRRLMSWARWHETRVRLI YEEALVNAEERSSIETCLVMRTPNLECLDEFYERRVMPRPDALAINPLAHKIRRYPQN KKIKKKNKRSVGKRHRKFPCPIQGCKMTLRSSVVMSHFLSDHCRRLQELWLTDRMVLM FYPSSYPPEQIYCICVLALLVRMPAKKAPIPRTIINDQLPSQYLYFAEHAPCFLMFAQ VERSTIEEKPSADPKPNNRDSLYIFWLTSADFHLKNVVCRVYIYCQDRSLKGNSLLNF VSMSEFKSVAHLVKNQPGSYLAIDYKTMASLTKDFKELLFIEVRYLNKMVEHEDSNDE TFDV" misc_feature 3430..4026 /gene="LOC108060281" /note="Domain of unknown function (DUF4729); Region: DUF4729; pfam15866" /db_xref="CDD:434981" ORIGIN 1 cagcaaagtc agctgtgagc ttccatcagt cgttatttgt atccaactag aacaacaagt 61 gtcccctttt tagaatcgcg aaagggggaa atccgagtgc cgttttgttt acagatccaa 121 gtgctccaaa aaccgatccc tgatcctgtg aaaatcttcg ctttaatatt ataaatcttg 181 cccgaagtat gaactacaat atattttaaa acctaaacta tttttttgat ctgatgaaga 241 gcctttaaga catttttata acataatttt caaggcgtgg cacacgaaat gccgaatacc 301 gagagacccc gagccaggcc aaagctccgg aacagaaacc ggattcgggc caggcccgcc 361 acgcccgagg atgtgctgga gaatcacctt cagaagctct tcgaggagca ggagctactg 421 cacaacctgc tgattagcca tcgtccgggg atcaaggccc agctggagga tctcgggggc 481 gagagcaact acgagttcga cacccaggac gaggaggcgg atgaagaaaa gcagctaaac 541 ttcaagccgg ttgacgagaa tccaaaggat tttagtggcc aaccagataa cgtaatcctg 601 gccgaggatg tggaggagga ctactcggat cctccgaaat tcgaagacct tccgatcctt 661 ccgcctcgaa tttatccgca ttgcaagaac cacatcacta gtgctattcc actgcccatt 721 ttggtgggca aatgcaccgc accgaaggtc gacggacagg gctacgatcc gcccttcctt 781 tatcccgatt tcattgccaa aaacgagaag agtcgcgtga agtacatctt cactttggtg 841 gatagtttgg tccagcaaat ggagcgtttt cttaaactca acgaacattc ggtgggcgag 901 ggagccaaaa aaaagcgacc caccggaact gttcccaaat cgaagtccca gaaccaattc 961 aaaatcgatc aagtgggtca tgcgaaatat acgattattg tcaagcctcg tttaagggag 1021 ccaaagcaac acaaccagtc gaagaatcat cgtttggcca aaagtaagat gccgaaatcc 1081 aaaccggaaa ctaatcccga actggatttg gatttggatt tggattgtga attcggcatg 1141 gagcacattg agaagtttcg agccaatacg gttcgcgatg aaaagcctgg gaaatccgga 1201 accaaaaaga aagttcagga gaaacccgct gaaaatgctg aaggtgctga aaaggaggaa 1261 gaagaagaag atgaagatac agaggtggag gaggaaagag aggagaaagt aatgttggta 1321 aagttgaaaa aacaggaacc gatattcgaa acaattctga gtagaccacc atcaaagaag 1381 gatgaatact cgtatatgtc gattcttgaa gctggcctgg ccaaagcccg tagaaagcag 1441 ttgagacggg agaaaaagta tggcaatgtc actccgcgac cttcgacgcc ctccacgcga 1501 ccttgcacgc ccatcgaaga gccgcctgct gccccgaaaa cctcgaaaca ctccacgttc 1561 tatgagctat ttgcggccca attggatgcc ggtcaacttg aaaggagcac cctaacgcca 1621 tggcgtctgt tacaagccag aggacccccg ccattaaaga gctggcaacg ggaaatcgtt 1681 aggtttgtgc gagagtataa gaaggaaaca aaacgaagac aaagaatgaa agagagggtc 1741 agaatgggaa agaagcccat ggcgaaaaga aagcccaaaa ctttgctaga agaagtattg 1801 ggtaaaaagg gatcgcgaag ggagctgctg caccggaagt accattatgt gcccatcaag 1861 ttgaagaaga agcgccaccg gcactacaag gcctacaaaa ggcagaagga atggttcagg 1921 gcggaacgtc aatacaagcg aatcctgtac ctaaggattt tccgacccga cgatctcttc 1981 aagaccaaat tgaccaagag ggaaaaatgg gcccaggggc gtcaattctt caacatacga 2041 atcctggatc cggtgaagcc caggaaattt cccaaaacag aagtacccga aatgccagcc 2101 gaggaagagt ggtcagagga tgaggaggat cccgacgcca gtcccaggcc catggacaag 2161 ggtcagaggt tgaagaacct gctcatggaa agcgctcgcc tgaagcggca ggagaaactc 2221 catcatttgg tactgcccga ggatcccctg agggcagtct acctgcccct tctagagcga 2281 cgaaagagcc tggtcgataa cgccacagaa aagattcctg agaaggagga acccgaaaaa 2341 gtagaagaga atcaacccga agcagtgtta gaaacattgg atagtgccag gactttctat 2401 agcacatcca ccactatcga actttccaat gttccactgt cgatagccac agttagcact 2461 ctcttctacg agtccaagcc accaccaatc gaagcaatcg aagctaagga ggcaatcgaa 2521 aacaaagccc ccgaacccat caaaaaagaa aagaaagcgg aaagaaagcg agagaaaaag 2581 gaaagacacc atcatagagt tggtcccaaa atccgattgc ccgatgataa ggcggaattc 2641 cggagatact tcgatttgga tggtatttcg ctgtacatcc tgaagcgcat gtccaagatg 2701 aagcccaaga agagccggcc acgcatcgaa ggtcgcgtaa ggatctccaa ctatctgacg 2761 catttctact ggcagcgttt gcgacgcgat gatccgtact tccattggtt cgtcaacgag 2821 ggcttctacc cggctcacta cctcactaag ctgaaggaac tcaaggacct ccaggtccag 2881 acgaatgacc aactggatga ggagattctg cagtacatag aacggatgaa taaggcggtc 2941 agtgagggcg aggagaaacc gttgacccta acctggcaga tggcccacct gatggtcacc 3001 tcctacttct gtgtgctcta ccacagagcc acttcgaagc gccgacctgt cgaggagagg 3061 tcattggtcc ggtgtcgcat tgccgtctcg gtggtggagc tgtatcaaca ggaactgagt 3121 cgcggatggg gaaaggacat tcgggtgaat tgcaggcgac tgatgagctg ggcccgctgg 3181 cacgagactc gcgttcggct gatctacgaa gaggcacttg tgaatgccga ggagaggtcc 3241 tctatcgaaa cctgcctggt gatgcgtact ccgaatttgg agtgcctcga tgagttctac 3301 gaacgtcgtg ttatgccccg acccgatgcc ttggccatca atccgttggc ccacaagata 3361 cgtcgctatc cccagaacaa gaagataaag aaaaagaata agcgtagtgt tggaaaacgc 3421 catcgaaagt tcccttgtcc cattcagggt tgcaagatga ctttgcgctc cagtgttgta 3481 atgtcgcact ttctcagcga tcactgccgc cgtttgcagg agctttggct caccgatcgc 3541 atggttctga tgttctatcc cagttcctat ccgcccgagc agatctactg catttgtgtg 3601 ctggccctgt tggtcaggat gccagccaaa aaggccccga taccacggac cataatcaac 3661 gatcagttgc cctcacaata tctgtatttt gccgaacatg ctccgtgttt tctgatgttc 3721 gcccaggtcg aaaggtcaac gattgaggaa aaaccatctg cagatcccaa acccaataat 3781 cgtgactctc tatacatctt ttggctaacc agcgccgatt ttcatctgaa aaatgtcgtc 3841 tgtcgcgtct acatttattg ccaggatcgc agtctcaagg gaaattcgct gttgaatttc 3901 gttagcatgt cggagtttaa gagcgttgcc catctggtca aaaatcagcc gggcagctat 3961 ctggccatcg attataaaac tatggcatcg ctgaccaagg acttcaagga actgctcttt 4021 atcgaggtgc gctacctcaa taaaatggtc gagcatgaag attccaatga cgagaccttc 4081 gatgtttaga aatttgaacc tctgggcaga aaactttgag ggatatcaac agcttaattg 4141 gaacttaact ggaactatat atatattttt atatgccaac tttggaaaat tattgtgtca 4201 cttgaaataa acacaggttg tgggtaataa attg