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LOCUS XM_070218800 2333 bp mRNA linear INV 09-DEC-2024 (Tom40), transcript variant X2, mRNA. ACCESSION XM_070218800 VERSION XM_070218800.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2333 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2333 /gene="Tom40" /note="Translocase of outer membrane 40; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108055518" CDS 357..1391 /gene="Tom40" /codon_start=1 /product="mitochondrial import receptor subunit TOM40 homolog 1" /protein_id="XP_070074901.1" /db_xref="GeneID:108055518" /translation="MGNVLAASSGAPGSGASNLGLGLPEPATLPSESGSPSGSSSSAG GADSFAAAKDAPLENPGTVEELHKKCKDIQAITFEGAKIMLNKGLSNHFQVSHTINMS NVVPSGYRFGATYVGTKQYSPTEAFPVLLGDIDPSGNLNANVIHQFSARLRCKFASQI QDSKMVASQLTTDYRGSDYTASLTVANPSIFTNSGVVVGQYLQSVTPALALGAELAYQ FGPNVPGRQIAIVSAVGRYTAGNSVWSGTLGQSGLHVCYYQKASDQLQIGVEVETSLR MQESVATLAYQIDLPKADLVFRGGIDSNWHISGVLEKRLTPLPFTLALSGRMNHVKNN FRLGCGLMIG" misc_feature 525..1388 /gene="Tom40" /note="Translocase of outer mitochondrial membrane 40 (Tom40); Region: Porin3_Tom40; cd07305" /db_xref="CDD:132766" polyA_site 2333 /gene="Tom40" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgttgtaat tcgttcggag ccgtgcaaat agagctattt ttaaaatttc gaataaatac 61 tcgttttaaa aaacgcggca gtctggcaac tcgcggtgcg ccgcacattt ctggcctata 121 tttttctaca aattcctatc tttttgattt ttttctgcat cacatttgat taaaggcaac 181 ccagaagtct tgaaatacat gccaaaaaac ttagaagtgg cgattacttt tatttttcta 241 caccttcgta gtcgtgctct aataattttt taaattccga taaatattta aagtcgcgaa 301 cgtctggcaa ccgcgcaaac aaccacaaac catctgatta catcgggact ttcgaaatgg 361 gcaacgtgct agcggcttcc tccggcgccc caggcagtgg cgcctccaat ctgggcctcg 421 gcctcccgga gccggccacc ctgccctccg aatccggctc cccatcgggc tcctcctcgt 481 ccgccggagg cgctgattcc tttgccgccg ccaaggatgc gccgctcgag aatcccggca 541 ccgtcgagga gctgcacaag aagtgcaaag acatacaggc catcaccttc gagggcgcca 601 agatcatgct gaacaagggg ctaagcaacc acttccaggt gtcgcacacc atcaacatga 661 gcaatgtggt gcccagtggc taccgcttcg gggccaccta cgtgggcacc aagcagtaca 721 gccccacgga ggccttcccc gtcctcctgg gcgacatcga cccctcgggc aacctcaacg 781 ccaacgttat ccaccagttc tccgcccgtc tgcgctgcaa gttcgcctcg cagatccagg 841 actccaagat ggtcgcctcg cagctgacga ccgactatcg cggcagcgac tacaccgcct 901 cgctgacggt ggccaatccg agcatattca ccaactccgg cgtggtcgtt ggccagtatc 961 tgcagtcagt cactccagcc ctcgccctgg gcgccgagct ggcctaccag ttcggcccga 1021 acgtccccgg ccgccagata gccattgtgt ccgccgtggg ccgctataca gcgggcaact 1081 cggtgtggtc ggggaccctg ggccagagcg gcctgcacgt gtgctactac cagaaggcca 1141 gcgaccagct gcagatcggt gtcgaggtgg agaccagcct gcgcatgcag gagtccgtgg 1201 ccacgctggc ctaccagatc gatctgccca aggcggatct ggtgttcaga ggcggaatcg 1261 attccaattg gcacatctcc ggagttttgg agaagcgcct taccccattg ccatttacgc 1321 tagccctaag cggacgcatg aaccacgtca agaacaactt tagactcggc tgcgggctga 1381 tgatcggcta ggccggacct ttgcgcagcc aaaccctact tcagcctcag accccaagca 1441 cacacactca tccattgtaa ctttttcaca tcatccgcta acaacaagaa gaacaacaac 1501 aacaaacaaa gagatatata taaatctgct aacgaacgtt tgcgtttacg ttttttatga 1561 tgatctgtcg tttgtcgtgt gtatagaaag tatgccttgc atcccgaaaa aggcggcctg 1621 cggggatctg gaatcctatg gaatggcttt tattctttga tccattatgt taccagttac 1681 cagtgtgcca ctgttcgtcg tccgttgtta atcgcccaat tttccccact gacagagtca 1741 taaacgcgga gttgaaaata ctaaagagaa aaatattcca caattattat aaatttcttc 1801 actcaacaca aaatacacac acacacacat ccaaaactac aacaagaaac tgtcactgta 1861 cattttaagt tgcttcctaa acgtacgcat ttatttagaa caaccagcta tttcctcaaa 1921 acaagctaaa acattaaata aatgaaaaac caacaagcag agacaacaag taataaatgc 1981 gtatgaaatg tatgttacaa gctatcaaat tggtaacaaa ctgctttaag tttataattt 2041 ataaatttac aattagttct aataacaaaa actttgttaa accaacgttt attaccttta 2101 tggcgtgcaa gaattaggca gaattcaatg agagacggcg ccgaaatgtt gtgaggggaa 2161 gtaaaaccaa acaaatcaaa ctcctaaaaa attaaaaacc caaacaatat gttaaacatg 2221 tgaaataatt aacttacttt gtaatttacc cgttcccaaa caagaaccat aaaaacaaca 2281 aagaaaacca gatgataaaa taggttttag aaaaaataaa caatttaaag aaa