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LOCUS XM_070218794 2864 bp mRNA linear INV 09-DEC-2024 (LOC108062301), transcript variant X2, mRNA. ACCESSION XM_070218794 VERSION XM_070218794.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2864 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2864 /gene="LOC108062301" /note="NEDD8 ultimate buster 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108062301" CDS 238..2061 /gene="LOC108062301" /codon_start=1 /product="NEDD8 ultimate buster 1" /protein_id="XP_070074895.1" /db_xref="GeneID:108062301" /translation="MSNLDNIFIQVRARLQSEGVKLWEEPYYSEDLGSIEGALENLAK DYSRVMGFDVCRCKFILTELQENALRKLAARREFSSTGVATFKVRRIDKHSGTTMLDI KCDLNSLGSDLQAVIADRLQLPRAEHVKCIAAGRMVAANATLADQLLRNNQQLMVVVG DGGNAGEALYERINRVKADVQAVVSSQNRLIEMEDQNGSPVFLPPAENRALLLGLGFC EKARAAMLREDFEEGLLLLLEADESFATCDSQFLESVDNYALLNLDIVWCYLCLKNVT QLPDAERRLAICGRNFRRSYGENFERLYALKGKACPERALIMRLQLLQGVVMFHQNRR DEAFERFEAANILLRELKINGDQLALLVEMGFEAQESRLALRSCSGDSNIEAAVQFIQ ERRQQLKDARKQSKAERALQRRLMRTDGNDCDWVNPRSVCTLTEMGFEAGLATAALKR SKNDLAKAVELLQTEAEVLRAALPRNSVASDQDKLAQLLQLGFNEANSRVALENASNN MERAIECLLRAFQSEEELRETIERVGRLAFDGPSTSSASTAPPSPIIEAVLKHARSEI ETYQAYERFNADISQNDMDYLDLPLVQEEKVLQEYLGLLQQ" misc_feature 481..714 /gene="LOC108062301" /note="ubiquitin-like (Ubl) domain found in NEDD8 ultimate buster 1 (NUB1) and similar proteins; Region: Ubl_NUB1; cd17062" /db_xref="CDD:340582" misc_feature order(502..504,577..579,643..645) /gene="LOC108062301" /note="key conserved lysines; other site" /db_xref="CDD:340582" misc_feature 1297..1410 /gene="LOC108062301" /note="UBA1 domain found in NEDD8 ultimate buster 1 (NUB1) and similar proteins; Region: UBA1_NUB1_like; cd14291" /db_xref="CDD:270477" misc_feature 1528..1617 /gene="LOC108062301" /note="UBA domain found in proteins involved in ubiquitin-mediated proteolysis; Region: UBA; cd14270" /db_xref="CDD:270456" misc_feature 1684..1797 /gene="LOC108062301" /note="UBA domain-like superfamily; Region: UBA_like_SF; cl21463" /db_xref="CDD:473871" ORIGIN 1 ctctgatata gttgtcaata tcatagccat aaatttaaat ttggtatttg ctatttgctt 61 tgagtgaaaa ccaggaaaat cacgcggaaa tcgctgattg cgcatcttct ttctctttgt 121 tttgttcttg tttttgttgt ggcgcagaaa cacatgtgcg cggtgtaaga agaagaagaa 181 caataacatc atatcatttg ttttttggct acattttgtg catcatcatc gtcggaaatg 241 tcgaatctgg acaacatatt catccaggtc cgggcacgcc tccaatccga gggcgttaag 301 ctctgggagg aaccctacta ttccgaggat cttggcagca tagagggcgc tctggagaac 361 ctggccaagg actactcccg cgtcatgggc ttcgatgtgt gccgctgcaa gttcatcctg 421 acggagctgc aggagaatgc gctccgcaag ctggccgccc ggcgggagtt cagctccaca 481 ggagtggcca ctttcaaggt gcgtcgcatc gacaagcaca gcggcaccac catgctggac 541 atcaagtgcg acttgaactc cctgggctcc gatcttcagg cggtcatagc cgacaggctg 601 cagcttccga gggccgagca cgtcaagtgc attgcagccg gcagaatggt ggccgccaat 661 gccacgctgg ctgaccagct gctgcggaac aaccagcagt tgatggtggt cgtgggcgat 721 ggtggcaatg ccggcgaagc cctctacgag cggatcaatc gagtgaaggc cgacgtgcag 781 gcagtggtct cctcgcagaa tcgtctcatc gagatggagg accagaacgg cagccccgtc 841 ttcctgccac ccgccgagaa tcgcgccctg ctcctgggcc tgggtttctg cgagaaggcc 901 cgtgcggcca tgctgcgcga ggatttcgag gagggcctgc tcctccttct ggaggccgac 961 gagtccttcg ccacctgcga ctcgcagttt ctcgagtccg tggacaacta tgccctgctc 1021 aatctggaca tcgtctggtg ctatctctgc ctgaagaacg tgacccagct gccggatgcc 1081 gagcgtcggc tggccatctg cgggcgcaac ttccggcgca gctatggcga gaacttcgag 1141 cgactgtacg ccctgaaggg caaggcctgc cccgaaaggg cgctcattat gcggctgcag 1201 ctgctccagg gcgtggtgat gttccaccag aatcgccgcg acgaggcctt cgagcgcttc 1261 gaagcggcca atattctgct gagggagctc aagatcaacg gcgaccagtt ggctctcctc 1321 gtggagatgg gcttcgaggc ccaggagtcg cggctggcgc tgcgctcctg ttcgggcgac 1381 agcaacatcg aggcggccgt gcagttcatc caggagcggc gtcagcagct caaggatgcc 1441 cgcaagcagt cgaaggcgga gcgggccctg cagcgccgcc tgatgcgcac cgatggcaac 1501 gattgcgact gggtgaatcc gcgcagtgtc tgcacgctca ctgaaatggg tttcgaggcg 1561 ggactggcaa cggcagcctt gaagcgctcc aaaaatgatc tggccaaggc ggtggaactg 1621 ctgcagaccg aggccgaggt gctgcgtgcc gccctgcccc gcaacagtgt cgccagcgac 1681 caggacaagc tggcccagct gctccagctg ggcttcaacg aggccaactc gcgcgtggcc 1741 ctcgagaacg cctcgaacaa catggagcgg gccatcgagt gcctgctgcg cgcctttcag 1801 agcgaggagg agctgaggga gaccatagag cgtgttggcc gcctggcctt cgatggccca 1861 tccacctcga gtgcctcgac tgctccgcca tcgcccatca tcgaggcggt gctgaagcat 1921 gctcgctccg agatcgagac ctaccaggcc tacgagcgct tcaacgcgga catcagccag 1981 aatgacatgg actacctgga cttgccgctg gtgcaggagg agaaggtcct gcaggagtat 2041 ctgggcctgc tgcagcagta gaatgccatc gccgccttaa cttagctgtt atatcgaaat 2101 agaaaccggt tgcgggccgt aactgtaatc atgacttgtc tatattgcaa atcgtagtct 2161 tataatggca cttaagtggc attcagtcgt ttctccagct gggcaaatag taacatataa 2221 agtataaagc cccttcgcta ttgacaactg cgaaatgtga ttacgaatcc acctttctga 2281 gccacctgaa acttgttagc gcctctggca attacctttt tttatccgta tctctatttt 2341 ttgtcgcttg actctcgacc ccggctcgaa cggcagcgct tgattggctc cagtcgtgac 2401 cttgtggggg ccaaagggcg ccgcccacta agctcatccc cccaagccga attgaatgga 2461 atttacccga tcttctttgg aaattaatca gcttaacgag gcatttttaa aacaactcgt 2521 ataccaagga atggggaagt ttgtagggat ttttaatact tggaaattta aaatggaact 2581 ttatttgttg ttttgtctat tttttatacg aattaaaccc ttttcataac aagggaaaaa 2641 tgaaaagact gacgatttta tttgttaggt ggtttagctt tcgagagtgc taatgaaaaa 2701 actgtgtgga atatatgtga ctaaaattta aggtgatggc attatatata tggtgctgtc 2761 tttcttttcc aatcggtttc aaacaaaaaa actttacaaa aaatgtgtca atcgctcaaa 2821 tattttatat ttttctaaga ataatcttaa ggcatgtgat ataa