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LOCUS XM_070218793 3480 bp mRNA linear INV 09-DEC-2024 helicase CG8611 (LOC108068145), transcript variant X2, mRNA. ACCESSION XM_070218793 VERSION XM_070218793.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3480 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3480 /gene="LOC108068145" /note="probable ATP-dependent RNA helicase CG8611; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068145" CDS 104..2911 /gene="LOC108068145" /codon_start=1 /product="probable ATP-dependent RNA helicase CG8611 isoform X2" /protein_id="XP_070074894.1" /db_xref="GeneID:108068145" /translation="MVDNITLNVNVGPTAQKKAQLPSKAVKKRGQKSENFDFQFNAEK PKVKAIVVRRRAVSTASKATNPTSKQVPSVSTANSSDSSTKKDDLSSSDLMFNITPSK SAEKITSGDDFMLNVTTKPVVTQKAKPKITRAERLGKKQRQGKPLAKLSDEQLTKALK NHRKPQNPNQMPRAGDIFRAQMEEERRKRRQEEAGEDEEPGEPASAKKATSSEKESPK SLEESSKSDEETPVEAQKPSKKQGETPVNRFRTKKIGLFDQSDVEALKQLGQRAVKPV KETIFTGTKISTLGLHPHAVKNLEDLLSIRELTSVQQKAIPEVLQGRDVLVRSQTGSG KTLAYALPLVELLQKQEPKIQRKDGVLALVIVPTRELVIQTYELIQKLVKPFTWIVPG SLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTANFKLTKLQFLILDEADRLLEL GYERDVKQLVEAIDKQRAESEQKDDLPQLQRMLLSATLTSQVQQLAGLTLKNPLYIDN SDEAASLALKSKDGYQKETIEALLEVEEDGLGEYQEDVTGVLSIPENLQLSYVVVPPK LRLVALSSLLSKELDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEEG DSEDDGETPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDI KLVVQYTPPQTTADFVHRVGRTARAGRRGRAVLFLAPSEAQFVRHLEKKRIRIQQGDM YAYLQTLLPKDDEARTVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPK ELKPIFNVRIAHMGHFAKSFALKEAPSKFAAQHAAPKAAPPTNRLTYTERDPEKIQAQ KRAKRRFTTTVSGEVRQLQQRDGAQAGKPGAPGSRGGFQGGGVGRSSFMKSLGKSRAL NMSEFDSGLPPEGPAKRRKQA" misc_feature 953..>2293 /gene="LOC108068145" /note="ATP-dependent RNA helicase DeaD; Provisional; Region: PRK11634" /db_xref="CDD:236941" misc_feature 989..1624 /gene="LOC108068145" /note="DEAD-box helicase domain of DEAD box protein 31; Region: DEADc_DDX31; cd17949" /db_xref="CDD:350707" misc_feature order(1013..1018,1022..1030,1037..1039,1091..1114) /gene="LOC108068145" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:350707" misc_feature 2396..2578 /gene="LOC108068145" /note="Domain of unknown function (DUF4217); Region: DUF4217; pfam13959" /db_xref="CDD:464056" ORIGIN 1 ttcgctgtga ctggcaaatc aagaagcaga gacgcgcacg ttttatttta tttacaaaat 61 ttacatttaa tttccaccga tttttagcca caaatgctgc aaaatggtgg ataatataac 121 gctgaatgta aatgttgggc cgacggccca gaaaaaagca caattgcctt cgaaagcggt 181 taaaaaacgt ggacaaaaat cggagaattt cgactttcaa ttcaatgcgg agaagccgaa 241 agtcaaggca attgtggtgc gaagaagggc ggtttcgaca gcctcaaaag ctacgaatcc 301 tacttcaaaa caagtgccct cagtttccac cgcgaattct tcagattctt ctactaaaaa 361 agatgattta tccagctccg atcttatgtt caatattacg ccctcgaaat cagctgaaaa 421 aatcacttca ggcgacgatt tcatgctgaa tgtgaccacc aaaccggtgg tcacccagaa 481 agcgaagcca aaaatcacta gagccgagcg attgggcaag aaacagcggc aggggaagcc 541 cctggcgaag ctcagcgatg agcagctcac gaaggcattg aaaaaccacc gaaagccgca 601 gaatcccaat caaatgccgc gggcaggcga cattttccgg gcccaaatgg aagaggagag 661 gcggaaaaga aggcaggagg aagctggaga ggatgaggag ccaggagaac cagcatccgc 721 taagaaagcc acatcatctg aaaaggaatc ccccaaatcc ctggaggaat catccaaatc 781 cgacgaagaa accccagtag aagcccaaaa acccagcaaa aagcaaggag aaacccctgt 841 aaatcgcttt cgcaccaaga agatcggcct cttcgaccag agcgacgtgg aggccctcaa 901 gcagctgggc cagcgggcgg tgaagcccgt caaggagacc atcttcacgg gcacgaagat 961 atccaccctg ggactgcatc cccatgcggt gaaaaattta gaggacctgc tgagcatccg 1021 tgagctgacc agcgtgcagc agaaggcgat acccgaggtg ctgcagggca gggatgtgct 1081 ggtgcgttcg caaacgggct ctggaaagac tctggcctac gctctgccgc tggtagaact 1141 cctgcaaaag caggagccca agattcagcg caaggacggc gtgctggccc tggttatcgt 1201 gcccacgcgg gagctcgtga tccagacgta cgaactcatc cagaagctgg tcaaaccctt 1261 cacctggatc gtgcccggct ctttgctggg cggcgagagc cggaagagcg aaaaggcgcg 1321 cctgcgcaag ggcatcaaca tactgatcgg cacgccgggt cgtctggtgg atcacctgct 1381 gcacaccgcc aacttcaagc tcacgaagct acagttcctc atcctcgacg aggccgatcg 1441 cctgctggag ctgggctacg agcgcgatgt caagcagctg gtggaggcca tcgacaagca 1501 gcgggcggag agcgagcaga aggatgatct tccccagctg cagaggatgc tgctgagtgc 1561 caccttgact tcgcaggtcc aacagctggc gggtttgacc ctgaagaatc ccctctacat 1621 cgacaacagc gatgaggcgg ccagcttggc cctgaaatcc aaggatggct accaaaagga 1681 gaccattgag gctctactag aggtggagga ggatggacta ggcgaatacc aggaggatgt 1741 gactggggtg ctcagcattc ccgagaatct gcagctcagc tatgtggtgg tgccgcccaa 1801 gctgcgcctg gtggccctgt cctcgctgct ctccaaggaa ctggacgcca gtcccaagca 1861 gttcaaggcc atcgtcttta tgagcaccac ggagatggtg aacttccacc acgacatgct 1921 gaacgaggcg ttgaccagga gagtgctcga cgaggaggat gagcaggagg agggggattc 1981 ggaggacgac ggggagacgc cgctgctgca gggactgcgc ttcttcaaat tgcatggctc 2041 catgactcaa accgagcgac agggcgtctt tcgaggattt cgggactgcg ccagctgcgt 2101 cctcctggcc accgatgtgg tgggtcgtgg catcgatgtg ccggacatta agctcgtggt 2161 gcagtacact ccgccgcaga ccaccgccga ctttgtgcat cgcgtgggcc gaacggcgag 2221 ggcgggacga aggggcaggg ccgtgctgtt cctggcgccc agcgaggcgc agttcgtgcg 2281 gcatctggag aagaagcgca tacgcatcca gcagggcgac atgtacgcct atctgcagac 2341 cctgctgccc aaggacgacg aggcgaggac cgtgcaggag gcggcctcca atctgcagca 2401 caagttccag acgctgctcg aggatgatcg cgagctgcac gacaagtcct gcaaagcctt 2461 tgtgtcctgg atgaagttct actcgacgtt tcccaaggag ctgaagccca tcttcaatgt 2521 gcgcatcgcc cacatgggcc actttgccaa gagttttgcg ctgaaggagg cgccctccaa 2581 gttcgccgcc cagcatgccg cccccaaggc ggccccgccc accaaccgac tgacctacac 2641 ggaaagagat cccgagaaga ttcaggccca gaagcgggcc aagcggcgct tcacgacgac 2701 ggtcagcggg gaggtgcgtc agctgcagca gcgggatgga gcgcaggccg ggaagcccgg 2761 agcgccggga tcgaggggag gcttccaggg cggcggagtg ggtcgcagca gcttcatgaa 2821 gagcctgggc aagtcgaggg ccctgaatat gtccgagttc gacagtggat tgccgccgga 2881 gggacccgcc aagcggcgaa agcaggcgta ggaggtggaa ttcagctgga ggagattaga 2941 ggaggaggag aacggagaag gagcactttg cggcacttta tgcgcgccat tttgcctgtc 3001 cgctgtgcct gctcaagcat ttaatcgaaa agaaaattgc tccatatata tatatactat 3061 atgtacagcc gagtgaaaat ctaggaaaat ctaagaaaac ccaaggagat gcgctcataa 3121 aagtttcatt tttctcaact tttaagcccg gacgtcctgc gggaaaagtt gtggccgcct 3181 gccagcatat tttaagcttt cctttccttt ttttcgtttc accaactgtt tttccatctt 3241 tttcgaattt tttttttttg ttttttgatt actcgccgta atatgttcgt tcattttttg 3301 tgtggaaaat attagaaatc cattttccgc tcactgcaga ttcattcagt tctgaaaatg 3361 tcaccagtgg cggcggcaaa cggcgacggg gggtcagagg tcggcacgtg ttgccttttt 3421 atgcaactga agcgcataat ttgttggaca aggcataaat aaatattgga tataaacact