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LOCUS XM_070218792 3984 bp mRNA linear INV 09-DEC-2024 (alpha-Man-Ia), transcript variant X4, mRNA. ACCESSION XM_070218792 VERSION XM_070218792.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3984 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3984 /gene="alpha-Man-Ia" /note="alpha-Mannosidase class I a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:108068030" CDS 255..2276 /gene="alpha-Man-Ia" /codon_start=1 /product="mannosyl-oligosaccharide alpha-1,2-mannosidase IA isoform X1" /protein_id="XP_070074893.1" /db_xref="GeneID:108068030" /translation="MYRISPIGRKSNFHSREKCLIGLVLVTLCFLCFGGIFLLPDNFG SDRVLRVYKHFQKAGPEIFIPAPPLAAHAPHRSEDPHFIGDRQRLEQKIRAELGDMLD EPPAAAGGGGGGEQPGQFQALAQQAQAPAPVAALADQQEADEEGQQHAAIPVLAAPVQ GDTAASQVSASHPQSPAQQSNQQQLPLGGGGNDQAADTLDATLEERRQKVKEMMEHAW HNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVDGLDTLYIMGLEKEYREGRDWI ERKFSLDNISAELSVFETNIRFVGGMLTLYAFTGDPLYKEKAQHIADKLLPAFQTPTG IPYALVNTKTGVAKNYGWASGGSSILSEFGTLHLEFAYLSDITGNPLYRERVQTIRQV LKEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYEYLLKAWLQSGQTDEEAREMF DEAMLAILDKMVRTSPGGLTYVSDLKFDRLEHKMDHLACFSGGLFALGAATRQNDYTD KYMEVGKGITNTCHESYIRAPTQLGPEAFRFSEAVEARALRSQEKYYILRPETFESYF VLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETL KYLYLLFSDDSVLPLDEWVFNTEAHPLPIKGANAYYRQAPVTLPASNAS" misc_feature 864..2213 /gene="alpha-Man-Ia" /note="Cyclases involved in the biosynthesis of lantibiotics, and similar proteins; Region: LanC_like; cl04955" /db_xref="CDD:471159" polyA_site 3984 /gene="alpha-Man-Ia" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caacgctgcc gtagtgctgg ccagaaatat cgatagcgcg tcatcgggaa gccgttccgt 61 ttcaccatca ctggagtggc gagtaacttg ttattaaaaa aaccataaag cataagaaat 121 caagactcct ggaaaacaga aaaacaaacc ttaaatgccc gagaagactg cagtgaaaca 181 ataaaaaaaa aaccccaaaa caagctgcca aacaggataa cacgcctaac taaataagaa 241 aaccaaaatc caccatgtat cgcatcagtc caattggacg caaatcgaac ttccactcgc 301 gcgagaaatg tctgattgga ctcgtcctgg taacgctgtg cttcctctgc ttcggcggca 361 tcttcctgct gccggacaac ttcggcagcg accgcgtcct gcgcgtctac aagcacttcc 421 agaaggccgg tcccgagatc ttcatcccgg ccccgcccct cgccgcccac gccccccatc 481 gcagcgagga tccgcacttt atcggcgatc gccagcgttt ggagcaaaag atccgtgcgg 541 aattgggcga tatgctggat gaaccacctg cggctgccgg cggaggagga ggcggggaac 601 agccaggaca attccaggca ctcgcccaac aggcacaagc tcccgctccc gtcgccgctc 661 tagcggatca gcaggaggcc gacgaggagg gtcaacagca cgccgccatt cccgttctgg 721 ccgctccagt tcagggcgac actgccgcca gccaggtatc cgcctcccat ccacaaagtc 781 ccgcccagca gagcaaccaa cagcaactgc ctttgggagg cgggggaaat gatcaggcgg 841 cggacacact ggacgccacg ctggaggagc gacgtcagaa ggtcaaagag atgatggagc 901 atgcgtggca caactacaag ttgtatgcct ggggcaagaa cgagctgcgt ccgctatcgc 961 agcgcccgca ttcggccagt atctttggat cctacgacct gggcgccacg atcgtcgacg 1021 gcctggacac gctgtatatc atgggactgg agaaggagta tcgcgagggt cgcgactgga 1081 tcgaacgcaa gttctcgctg gacaatatta gcgccgagct gagtgtcttc gagacgaaca 1141 ttcgatttgt gggcggcatg ctgacgctgt acgccttcac gggcgatccg ctgtacaagg 1201 agaaggccca gcatatcgcc gacaagctgc tgcccgcctt ccagacgccc acgggcattc 1261 cctatgcgct ggtcaacacc aagaccggtg tggccaagaa ctacggctgg gcgtccggcg 1321 gcagctccat cctgtccgaa ttcggcaccc tgcacttgga gttcgcctac ctgagcgaca 1381 ttaccgggaa tccactgtac cgggagcgag tccagaccat tcgccaggtg ctcaaggaga 1441 tcgagaagcc gaagggcctg taccccaact tcctcaatcc aaagacgggc aaatggggac 1501 agctccacat gtccttgggc gccctgggcg atagctacta cgagtacttg ctgaaggcct 1561 ggctgcaatc cgggcaaacg gacgaggagg cccgcgagat gttcgacgag gcgatgctgg 1621 ccattctgga caagatggtg cgcaccagtc ccggcggcct gacctatgtc tccgacctca 1681 agttcgatcg gctggagcac aagatggacc atttggcctg cttctcgggt ggcctctttg 1741 ctttgggagc tgccacgcgt cagaatgatt atacagacaa gtacatggag gtgggcaagg 1801 gcattacgaa cacctgccac gagagctaca ttcgagcacc cactcagctg ggccccgagg 1861 cctttagatt cagtgaagcc gtggaggcgc gagctctgag atcgcaggag aagtactata 1921 tcctccggcc ggagactttc gagagctact ttgtgctgtg gcgcctcacg cacgaccaga 1981 agtaccgcga ctggggctgg gaggcggtcc tcgccctgga aaagcactgc cgcacggcgc 2041 acggttattg cggcctgcgc aatgtctacc agcaggagcc gcagaaggac gatgtccagc 2101 agagcttctt tctggccgaa acactcaagt acctgtactt gctgttctca gacgactcgg 2161 tgctgccgct ggacgagtgg gtgttcaaca cggaggccca tccgctgccg atcaaggggg 2221 cgaatgcgta ctacagacag gcgcccgtca cgctgccggc ctcgaatgcc tcgtaaacgg 2281 gcgccctgct gcgccgctgg ctgttcggcc tgtccctagc actgcacctt aattagttct 2341 cgaaaattgc atagatatat gtgtacgcga tcgcaactct attttttttt tctttgtcct 2401 aagtttttag ttagtttacg tgatgatatg atgatacgat gacaactgcg tacgaaagat 2461 attgtatgtt tacaaaaaaa accaagtaca tacgagatac tttcaatgta acatatttat 2521 aaagcttgca catatatagg aacttaaact taaacggata tatcgtagtt tagtccttaa 2581 ctgtttgcac aagtttctcc gagtctctct ctctcttttt tatttacctt atgaggtata 2641 aggtatatta taatccaaat agttgactga ggtggaaggc tggtaaaaag gagacctcaa 2701 tttccattta aaagcgaatg acgtaggcgt aggcaaacac tcttgatatt aattatgata 2761 tgatatacgg atatatgtat gtgtaaatgt aaaactcagg tgttcttatt atgatttacc 2821 ttgcgctcac acaaggctct ttctcactaa ctctctcagc tacgtaacta tctctacaga 2881 agcattctat acgcaattct cgatctgcat ctgccactat atctcggtgt ggattcatgg 2941 atcgataggt ctactgatag atctgctgat ttctgatttc caattcgaat ctttgaccac 3001 tttgttttgt atataatttc tattgacttt cctcgcaaaa tgaaggcaga agaaaatcga 3061 attgatattt atacaagtat attcttacac attattgttt accttgtagc ctaaatattt 3121 aaatataaat ctaatataga gtctagctta ctttatgtga cgaaacaaat gtaacgcgaa 3181 ttaccttaaa tccagaacat caagcgaaac gaaagcaaat gaaatatata taaaaatata 3241 cctaaataaa tatatatttg tatttaatta aatcaaataa aacgtaggca attgttaaaa 3301 taaattaatt ttacgatggc acgagccgag cgaatggtaa tttaattttt aacaactgta 3361 aaggtttttt ataatattaa taataattat aataataaca atacccataa taatcatatt 3421 tataattcta tttataactg taatccatag actaagccac aagcatcgca tgataaatga 3481 aatatagaag ttatttaatt gttttttttt tgtaacctac gcagcttggg ctgtgtaaag 3541 tgatttaaca aaagtaaaaa taacataaaa cctaagctaa gaccctaatg taaaaccgaa 3601 aaattttaat gaaaaatttt aagaaattaa aataatatca aacttaatta aatcgataaa 3661 tgagaaaccc taaaaatcac cagctaatga atgtaaaaca agccgagggc taaagtaaat 3721 taaaatcgaa tctaactaag cgtaaattta gtccttagag ccaacttttt ttgtttagat 3781 caaattagaa ttgaggccaa tagcgagata tatatgtaaa tgatatatca tccgatggca 3841 atgccccatg catagatttg aatggcagtt tgtaaatgca tcagacataa tacgttcgtc 3901 gactgcagtc cctgagctgc ggaagatgaa aattgtattt tgcctaatca taagtttaat 3961 aaagatctaa taattaactt aaaa