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LOCUS XM_070218791 4028 bp mRNA linear INV 09-DEC-2024 (alpha-Man-Ia), transcript variant X3, mRNA. ACCESSION XM_070218791 VERSION XM_070218791.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4028 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4028 /gene="alpha-Man-Ia" /note="alpha-Mannosidase class I a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:108068030" CDS 299..2320 /gene="alpha-Man-Ia" /codon_start=1 /product="mannosyl-oligosaccharide alpha-1,2-mannosidase IA isoform X1" /protein_id="XP_070074892.1" /db_xref="GeneID:108068030" /translation="MYRISPIGRKSNFHSREKCLIGLVLVTLCFLCFGGIFLLPDNFG SDRVLRVYKHFQKAGPEIFIPAPPLAAHAPHRSEDPHFIGDRQRLEQKIRAELGDMLD EPPAAAGGGGGGEQPGQFQALAQQAQAPAPVAALADQQEADEEGQQHAAIPVLAAPVQ GDTAASQVSASHPQSPAQQSNQQQLPLGGGGNDQAADTLDATLEERRQKVKEMMEHAW HNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVDGLDTLYIMGLEKEYREGRDWI ERKFSLDNISAELSVFETNIRFVGGMLTLYAFTGDPLYKEKAQHIADKLLPAFQTPTG IPYALVNTKTGVAKNYGWASGGSSILSEFGTLHLEFAYLSDITGNPLYRERVQTIRQV LKEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYEYLLKAWLQSGQTDEEAREMF DEAMLAILDKMVRTSPGGLTYVSDLKFDRLEHKMDHLACFSGGLFALGAATRQNDYTD KYMEVGKGITNTCHESYIRAPTQLGPEAFRFSEAVEARALRSQEKYYILRPETFESYF VLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETL KYLYLLFSDDSVLPLDEWVFNTEAHPLPIKGANAYYRQAPVTLPASNAS" misc_feature 908..2257 /gene="alpha-Man-Ia" /note="Cyclases involved in the biosynthesis of lantibiotics, and similar proteins; Region: LanC_like; cl04955" /db_xref="CDD:471159" polyA_site 4028 /gene="alpha-Man-Ia" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtcatcggga agccgttccg tttcaccatc actggagtgg cgagtaactt gttattaaaa 61 aaacgtaagc ccgtcagatt taaacgcgaa tctcgaaaag gcctcgatgg tttgacggct 121 cggctgccaa ttgaatcgaa tcgttcgcat aaagcataag aaatcaagac tcctggaaaa 181 cagaaaaaca aaccttaaat gcccgagaag actgcagtga aacaataaaa aaaaaacccc 241 aaaacaagct gccaaacagg ataacacgcc taactaaata agaaaaccaa aatccaccat 301 gtatcgcatc agtccaattg gacgcaaatc gaacttccac tcgcgcgaga aatgtctgat 361 tggactcgtc ctggtaacgc tgtgcttcct ctgcttcggc ggcatcttcc tgctgccgga 421 caacttcggc agcgaccgcg tcctgcgcgt ctacaagcac ttccagaagg ccggtcccga 481 gatcttcatc ccggccccgc ccctcgccgc ccacgccccc catcgcagcg aggatccgca 541 ctttatcggc gatcgccagc gtttggagca aaagatccgt gcggaattgg gcgatatgct 601 ggatgaacca cctgcggctg ccggcggagg aggaggcggg gaacagccag gacaattcca 661 ggcactcgcc caacaggcac aagctcccgc tcccgtcgcc gctctagcgg atcagcagga 721 ggccgacgag gagggtcaac agcacgccgc cattcccgtt ctggccgctc cagttcaggg 781 cgacactgcc gccagccagg tatccgcctc ccatccacaa agtcccgccc agcagagcaa 841 ccaacagcaa ctgcctttgg gaggcggggg aaatgatcag gcggcggaca cactggacgc 901 cacgctggag gagcgacgtc agaaggtcaa agagatgatg gagcatgcgt ggcacaacta 961 caagttgtat gcctggggca agaacgagct gcgtccgcta tcgcagcgcc cgcattcggc 1021 cagtatcttt ggatcctacg acctgggcgc cacgatcgtc gacggcctgg acacgctgta 1081 tatcatggga ctggagaagg agtatcgcga gggtcgcgac tggatcgaac gcaagttctc 1141 gctggacaat attagcgccg agctgagtgt cttcgagacg aacattcgat ttgtgggcgg 1201 catgctgacg ctgtacgcct tcacgggcga tccgctgtac aaggagaagg cccagcatat 1261 cgccgacaag ctgctgcccg ccttccagac gcccacgggc attccctatg cgctggtcaa 1321 caccaagacc ggtgtggcca agaactacgg ctgggcgtcc ggcggcagct ccatcctgtc 1381 cgaattcggc accctgcact tggagttcgc ctacctgagc gacattaccg ggaatccact 1441 gtaccgggag cgagtccaga ccattcgcca ggtgctcaag gagatcgaga agccgaaggg 1501 cctgtacccc aacttcctca atccaaagac gggcaaatgg ggacagctcc acatgtcctt 1561 gggcgccctg ggcgatagct actacgagta cttgctgaag gcctggctgc aatccgggca 1621 aacggacgag gaggcccgcg agatgttcga cgaggcgatg ctggccattc tggacaagat 1681 ggtgcgcacc agtcccggcg gcctgaccta tgtctccgac ctcaagttcg atcggctgga 1741 gcacaagatg gaccatttgg cctgcttctc gggtggcctc tttgctttgg gagctgccac 1801 gcgtcagaat gattatacag acaagtacat ggaggtgggc aagggcatta cgaacacctg 1861 ccacgagagc tacattcgag cacccactca gctgggcccc gaggccttta gattcagtga 1921 agccgtggag gcgcgagctc tgagatcgca ggagaagtac tatatcctcc ggccggagac 1981 tttcgagagc tactttgtgc tgtggcgcct cacgcacgac cagaagtacc gcgactgggg 2041 ctgggaggcg gtcctcgccc tggaaaagca ctgccgcacg gcgcacggtt attgcggcct 2101 gcgcaatgtc taccagcagg agccgcagaa ggacgatgtc cagcagagct tctttctggc 2161 cgaaacactc aagtacctgt acttgctgtt ctcagacgac tcggtgctgc cgctggacga 2221 gtgggtgttc aacacggagg cccatccgct gccgatcaag ggggcgaatg cgtactacag 2281 acaggcgccc gtcacgctgc cggcctcgaa tgcctcgtaa acgggcgccc tgctgcgccg 2341 ctggctgttc ggcctgtccc tagcactgca ccttaattag ttctcgaaaa ttgcatagat 2401 atatgtgtac gcgatcgcaa ctctattttt tttttctttg tcctaagttt ttagttagtt 2461 tacgtgatga tatgatgata cgatgacaac tgcgtacgaa agatattgta tgtttacaaa 2521 aaaaaccaag tacatacgag atactttcaa tgtaacatat ttataaagct tgcacatata 2581 taggaactta aacttaaacg gatatatcgt agtttagtcc ttaactgttt gcacaagttt 2641 ctccgagtct ctctctctct tttttattta ccttatgagg tataaggtat attataatcc 2701 aaatagttga ctgaggtgga aggctggtaa aaaggagacc tcaatttcca tttaaaagcg 2761 aatgacgtag gcgtaggcaa acactcttga tattaattat gatatgatat acggatatat 2821 gtatgtgtaa atgtaaaact caggtgttct tattatgatt taccttgcgc tcacacaagg 2881 ctctttctca ctaactctct cagctacgta actatctcta cagaagcatt ctatacgcaa 2941 ttctcgatct gcatctgcca ctatatctcg gtgtggattc atggatcgat aggtctactg 3001 atagatctgc tgatttctga tttccaattc gaatctttga ccactttgtt ttgtatataa 3061 tttctattga ctttcctcgc aaaatgaagg cagaagaaaa tcgaattgat atttatacaa 3121 gtatattctt acacattatt gtttaccttg tagcctaaat atttaaatat aaatctaata 3181 tagagtctag cttactttat gtgacgaaac aaatgtaacg cgaattacct taaatccaga 3241 acatcaagcg aaacgaaagc aaatgaaata tatataaaaa tatacctaaa taaatatata 3301 tttgtattta attaaatcaa ataaaacgta ggcaattgtt aaaataaatt aattttacga 3361 tggcacgagc cgagcgaatg gtaatttaat ttttaacaac tgtaaaggtt ttttataata 3421 ttaataataa ttataataat aacaataccc ataataatca tatttataat tctatttata 3481 actgtaatcc atagactaag ccacaagcat cgcatgataa atgaaatata gaagttattt 3541 aattgttttt tttttgtaac ctacgcagct tgggctgtgt aaagtgattt aacaaaagta 3601 aaaataacat aaaacctaag ctaagaccct aatgtaaaac cgaaaaattt taatgaaaaa 3661 ttttaagaaa ttaaaataat atcaaactta attaaatcga taaatgagaa accctaaaaa 3721 tcaccagcta atgaatgtaa aacaagccga gggctaaagt aaattaaaat cgaatctaac 3781 taagcgtaaa tttagtcctt agagccaact ttttttgttt agatcaaatt agaattgagg 3841 ccaatagcga gatatatatg taaatgatat atcatccgat ggcaatgccc catgcataga 3901 tttgaatggc agtttgtaaa tgcatcagac ataatacgtt cgtcgactgc agtccctgag 3961 ctgcggaaga tgaaaattgt attttgccta atcataagtt taataaagat ctaataatta 4021 acttaaaa