Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218787 8594 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X30, mRNA. ACCESSION XM_070218787 VERSION XM_070218787.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8594 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8594 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins" /db_xref="GeneID:108059094" CDS 1399..7755 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X30" /protein_id="XP_070074888.1" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL EDIDPFYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFII TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDE GISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNI RRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENG AIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRN QSVGATNGGTTCLDTNHKLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKD VMVLNDIIEQAAGRHSRASDRGEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLK LQEWISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIE ATMKLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKS WPTLNLLISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDHKDRFPDGDLPR WNFTDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLAL LLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQ PSEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKY LNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEG ECEEGPLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLK TFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEML IKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRA MSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKL SHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVD KQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQK KYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRY DASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVL SDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFL VMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEE ACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEG LTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPIC RGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEY CARLIQHAWRKHKARGEGGGGGGGSFEPDPDQVDGDGGGDPDAGEPANDEPADGMAEA PAGGGGGGGGGDGSVNGGGTGTGTGDGAADAADESNVNSPGEDAASAAAGAATGATAG SPGAGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV" misc_feature 1852..2706 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3061..3618 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3823..4458 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 4534..5193 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 5203..6018 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5986..6144 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 6031..6042 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 6166..6918 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6949..7092 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 tgacagtttc agtaaaccac ggagacgaac ggattacggg taacgaatca gcagcaacag 61 tggcagcagc catcagccag cagccagaga acaaaaaata tcaaagaaaa aaaaacagca 121 cttaccaaaa aaaaaggaaa taaaaatagt agtcaaagga ggaccaaata aaaaaaacac 181 aaaaaactga aagagtaaaa ccgaatataa aaacggctta aaggctaaaa tctcgagcac 241 tgagtcctgt taaaaatatg aaataaaaaa gttcacacac ttgccgagcc aaccatatat 301 atatatatca tactatatat atataccatc atacatatat atatatccga tatataagtg 361 ccttgagcag tgcgcaggca gtccaaagtc caaagaaagt tttacataag ttctccctcc 421 tcaatcaggc aacgtttttt ttctatagtt ttttttccgt gagtgtgacc caaaaacaaa 481 aaataatcaa agagaaggaa aggcagcagc agcaagaaga agcacaagca gaataagaag 541 aagaagaaaa cggaggagaa gaagaaggag aataagaaga agcagccagc cagccatcag 601 gaaaacacaa aagtcaaaaa acaaactata tagagctgag ctggccccaa aaaaaaagaa 661 tatataaaaa ctctgggaac aaaacgcaac gtttgatgaa aatttttggc aactcgtcgc 721 gtcgtcttgg ttgttgttaa ccacatcctg ctaacgccaa agtccgaaaa taaaattcaa 781 cccaaatacc caaaaataac acagatcaaa caaacaaagc aaaaaaaaag caaacaaaat 841 aacaaaaaaa aaccaaaaaa aaaaacaaac aaaaaattca tcttctactt gttctaccgc 901 ttcaacttta ttcgtcttcg tctccgtaat aaatatataa aaagtatata catatatata 961 tatatatata tgcatatgtg tgtgagtgcg tcgcgtgtgt gttggtgcct gtaaatgtgt 1021 gagccacaac aacaacaaca gcagcagcag ccagagccag agcaacaacc acagcagcag 1081 caacaacaac aacaacaaca gtagttaaca gcagcaacaa ttcttagcag caataacaat 1141 acaagcaagc accaccacaa caacaagagc agcaacaaca ccaaaaacag ccacaatagc 1201 aatcacaata acaacatcaa aggatagagc gagcagccaa gcacaacatc gattgacatc 1261 gattaacgca tcgtgctaag cggcgggcgc taatcgaaca tggcgcctcg gatatagttg 1321 tagctttaat gtagcaggcg acatccatgt gcctcatgcc ttggaaatct aaggctctca 1381 tcgttggccg catagacaat gacagaagat tccgactcga tatctgagga agaacgcagt 1441 ttgttccgtc cctttacccg cgaatcattg gtgcaaatcg aacaacgcat tgccgctgaa 1501 catgaaaagc agaaggagct ggaaagaaag agagccgagg gagaggtgcc gcaatatggt 1561 cgcaagaaaa aacaaaaaga aatccgatat gatgacgagg acgaggatga aggtccacaa 1621 ccggatccta cacttgaaca gggtgtgcca atacctgttc gattgcaggg cagcttcccg 1681 ccggaattgg cctccactcc tctcgaggat atcgatccct tctacagcaa tgtactgaca 1741 ttcgtagttg taagcaaagg aaaagatatt tttcgctttt ctgcatcaaa agcaatgtgg 1801 atgctcgatc cattcaatcc gatacgtcgt gtggccattt acattctagt gcatccatta 1861 ttttccctat tcatcatcac cacaattctc gtcaactgca tcctgatgat aatgccgaca 1921 acgcccacgg ttgagtccac tgaggtgata ttcaccggaa tctacacatt tgaatcagct 1981 gttaaagtga tggcacgagg tttcatttta tgcccgttta cgtatcttag agatgcatgg 2041 aattggctgg acttcgtagt aatagcttta gcttatgtga ccatgggtat agatttaggt 2101 aatctagcag ccttgcgaac gtttagggtg ctgcgagcgc ttaaaaccgt agccattgtg 2161 ccaggcttga agaccatcgt cggcgccgtc atcgaatcgg tgaagaatct gcgcgatgtg 2221 ataatcctca ccatgttctc cctgtcggtc ttcgcgctga tgggcctgca gatctacatg 2281 ggcgtgctca cgcagaagtg catcaagaag ttcccgctgg acggctcctg gggcaatctg 2341 accgacgaga actgggacta tcacaatcgc aacagctcca attggtactc ggaggacgag 2401 ggcatctcat ttccgctgtg cggcaatata tccggcgcgg ggcaatgcga cgatgactac 2461 gtgtgtctgc aggggtttgg gccgaatccg aactacggct acaccagctt cgattcattc 2521 ggctgggcct tcctgtccgc cttccggctg atgacacagg acttctggga ggacctctac 2581 cagctggtgt tgcgcgccgc cggaccatgg cacatgctgt tctttatagt catcatcttc 2641 ctaggttcat tctatcttgt gaatttgatt ttggccattg ttgccatgtc gtatgacgaa 2701 ttgcaaaaga aggccgaaga agaagaggct gccgaagagg aggcgatacg tgaagcggag 2761 gaggctgccg ccgccaaagc tgccaagctg gaggagcggg ccaatgcgca ggctcaggca 2821 gcagcggatg cggctgccgc cgaagaggct gcactgcatc cggagatggc caagagtccg 2881 acgtattcgt gcatcagcta tgagcttttc gttggcggcg agaagggcaa cgatgacaac 2941 aacaaggaga agatgtccat tcgcagcgtc gaggtggagt cggagtcggt gagcgttata 3001 caaagacaac cagcacctac cacagcacac caagctacca aagttcgtaa agtgagcacg 3061 acatccttat ccttacctgg ttcaccgttt aacatacgca ggggatcacg tagttctcac 3121 aagtacacga tacggaacgg acgtggccgc tttggtatac ccggtagcga tcgcaagccg 3181 ttggtattgt caacatatca ggatgcccag cagcacttgc cctatgccga cgactcgaat 3241 gccgtcaccc cgatgtccga ggagaacggg gccatcatag tgcccgtgta ctatggcaac 3301 ctaggctctc ggcactcatc gtatacctcg catcagtccc gaatatcgta tacctcacat 3361 ggcgatctac tcggcggcat ggccgtcatg ggcgtcagca caatgaccaa ggagagcaaa 3421 ttgcgcaacc gcaacacacg caatcaatca gtgggcgcca ccaatggcgg caccacctgc 3481 ctggacacca atcacaagct cgagcatcgc gactacgaaa tcggtctgga gtgcacggac 3541 gaagctggca agattaaaca tcatgacaat ccttttatcg agcccgtcca gacacaaacg 3601 gtggtcgaca tgaaagatgt gatggtcctg aatgacatca tcgaacaggc cgctggtcgg 3661 cacagtcggg caagcgatcg cggtgaggac gatgacgagg acgggccgac gttcaaagac 3721 aaggcactcg aagtgatcct aaagggcatc gatgtgtttt gtgtgtggga ctgttgctgg 3781 gtttggttga aattgcagga gtggatctcg ctgatcgtct tcgatccctt cgtcgagctc 3841 ttcatcacgc tgtgcattgt ggtcaacacg atgttcatgg cgatggatca ccacgatatg 3901 aacaaggaga tggagcgcgt gctcaagagt ggcaactatt tcttcacggc cacctttgcc 3961 atcgaggcca ccatgaagct gtgcgccatg agccccaagt actatttcca ggagggctgg 4021 aacatcttcg acttcatcat cgtggccctg tcgcttttgg agctgggtct cgagggcgtc 4081 cagggcctgt ccgtcttgcg ttcgtttcga ttgctgcgtg ttttcaagct ggccaagtcc 4141 tggccgacgc tgaatttgct catatcgatt atgggccgca ctgtcggcgc cctgggcaat 4201 ctgaccttcg tcctgtgcat tattatcttc atattcgcgg tcatgggcat gcagctattt 4261 ggcaagaact acacagatca caaggaccgt ttcccggatg gcgacctgcc gcgctggaac 4321 ttcaccgact ttatgcacag cttcatgatc gtgttccggg tgctctgcgg cgaatggatc 4381 gagtccatgt gggactgtat gtacgtgggc gatgtctcgt gcattccctt cttcttggcc 4441 accgttgtca tcggcaatct tgtggtactt aaccttttct tagccttgct tttgtccaat 4501 tttggctcat ctagcttatc agcgccgact gccgataacg atacgaataa aatagccgag 4561 gccttcaatc gaattggccg atttaaaagt tgggttaagc gtaatattgc tgattgtttc 4621 aagttaatac gtaacaaatt gacaaatcaa ataagtgatc aaccatcaga gcatggtgac 4681 aacgaactgg agctggggca cgacgagatc ctcgccgatg gcctgatcaa gaagggaatc 4741 aaggagcaga cgcaactgga ggtggccatc ggggatggca tggagttcac gatacacggc 4801 gacatgaaga acaacaagcc gaagaaatcc aaatatctaa ataacgcaac ggacgacgac 4861 actgccagca ttaactcata tggtagccat aagaatcgac cattcaagga cgagagccac 4921 aagggcagcg ccgagacgat ggagggcgag gagaagcgcg acgccagcaa ggaggattta 4981 ggtctcgacg aggaactgga cgaggagggc gaatgcgagg agggcccgct cgacggtgat 5041 atcattattc atgcacacga cgaggatata ctcgatgaat atccagctga ttgctgcccc 5101 gattcgtact ataagaaatt tccgatctta gccggtgacg atgactcgcc gttctggcaa 5161 ggatggggca atttacgact gaaaactttt caattaattg aaaataaata ttttgaaaca 5221 gctgttatca ctatgatttt aatgagtagc ttagctttgg cattagaaga tgtacatctg 5281 ccacaaagac ccatactgca ggatatttta tactatatgg acagaatatt tacggttata 5341 ttcttcttgg aaatgttaat caagtggttg gcgctcggct tcaaagtgta cttcaccaac 5401 gcgtggtgtt ggctcgattt cgtgattgtc atggtatcgc ttatcaactt cgttgcttca 5461 cttgttggag ctggtggtat tcaagccttc aagactatgc gaacgttaag agcactgaga 5521 ccactacgtg ccatgtcccg tatgcagggc atgagggtcg tcgttaatgc gctggtacaa 5581 gctataccgt ccatcttcaa tgtgctattg gtgtgtctaa tattttggct aatttttgcc 5641 ataatgggtg tacagctttt tgctggaaaa tattttaagt gcgaggacat gaacggcacg 5701 aagctcagcc acgagatcat accaaatcgc aatgcctgcg agagcgagaa ctacacgtgg 5761 gtgaattcag caatgaattt cgatcatgta ggtaacgcgt atctgtgcct tttccaagtg 5821 gccaccttca aaggctggat acaaataatg aacgatgcta tcgattcacg agaggtggac 5881 aagcaaccaa ttcgtgaaac gaacatctac atgtatttat atttcgtatt cttcatcata 5941 tttggatcat ttttcacact caatctgttc attggtgtta tcattgataa ttttaatgag 6001 caaaagaaaa aagcaggtgg atcattagaa atgttcatga cagaagatca gaaaaagtac 6061 tataatgcta tgaaaaagat gggctctaaa aaaccattaa aagccattcc aagaccaagg 6121 tggcgaccac aagcaatagt ctttgaaata gtaaccgata agaaattcga tataatcatt 6181 atgttattca ttggtctgaa catgttcacc atgaccctcg atcgttacga tgcgtcggac 6241 acgtacaacg cggtcctaga ctatctcaat gcgatattcg tagttatttt cagttccgaa 6301 tgtctattaa aaatattcgc tttacgatat cactatttta ttgagccatg gaatttattt 6361 gatgtagtag ttgtcatttt atccatctta ggtctcgtac ttagcgatat tatcgagaag 6421 tacttcgtgt cgccgaccct gctccgagtg gtgcgtgtgg cgaaagtggg tcgagtcctg 6481 cgactggtga agggcgccaa gggcatcagg acactgctat tcgcgttggc catgtcgctg 6541 ccggccctct tcaacatctg cctgctgctg ttcctggtca tgttcatctt cgccatcttc 6601 ggcatgtcgt tcttcatgca cgtgaaggag aagagcggca tcaacgacgt ctacaacttc 6661 aagacctttg gtcagagcat gatcctgctc tttcagatgt cgacgtcagc cggttgggat 6721 ggtgtactgg acgccattat caatgaggaa gcatgcgatc cacccgacaa cgacaaaggc 6781 tatccgggca attgtggttc agcgaccgtt ggaataacgt ttctcctctc atacctagtt 6841 ataagctttt tgatagttat taatatgtac attgctgtca ttctcgagaa ctatagtcag 6901 gccaccgagg acgtgcaaga gggtctaacc gacgacgact acgacatgta ctacgagatc 6961 tggcagcaat tcgatccgga gggcacccag tatatacgct acgaccagct gtccgaattc 7021 ctggacgtgc tggagccccc gctgcagatc cataagccga acaagtacaa gatcatatcg 7081 atggacatac ccatctgtcg cggcgacctc atgtactgtg tcgacatcct cgacgccctc 7141 acgaaagact tctttgcgcg caagggcaat ccgattgagg agacgggcga gatcggtgag 7201 atagccgccc gtccggacac ggagggctat gagcccgtct catcgacgct gtggcgccag 7261 cgggaggagt actgtgcccg tctcatccag cacgcctggc ggaagcacaa ggcgcgcggc 7321 gagggcggtg gtggtggtgg tgggtccttc gagccggatc cggatcaggt cgatggcgat 7381 ggtggtggcg atccggatgc cggggagcct gcaaacgacg aaccggcgga tgggatggct 7441 gaggcccccg caggaggagg aggaggagga ggaggaggag atggtagtgt taatggtgga 7501 ggaactggaa ctggaactgg agacggagct gccgatgctg ccgacgagag caatgtaaat 7561 agtccgggtg aggatgcagc gtcggcggca gcaggagcgg cgacaggagc gacggcggga 7621 agtcccgggg cgggcagcgc cggacgacag accgccgttc tcgtggagag cgacgggttc 7681 gtgacgaaga acggccacaa ggtggtcatc cactcgcgat cgccgagcat cacgtcgcgc 7741 acggcggatg tctgagccag gcctcgcccc cccctccaag atgcacgcga gtattagcat 7801 gagtacgtgt tggatgttgc atgttgcgtg ttgcgcgttg ggtgcttaac caatccagtg 7861 cgtcatgtgc aactaaacag tgagctaaca acaacagcga acaaggcgaa caacaagcat 7921 aattttctgc tatatataat gaaagtacac catacaacaa aacaatcgaa acaaaccaac 7981 aacagtaaca acatcatcaa gagaacaacc acaacaacaa cagtaacaac aatcgatgaa 8041 ataacgaaga agaacaacaa caacaccagt gtaatgtctt tgagttacaa aacatacata 8101 catacatata catactatat atttgtatac ccgcattatt cagttaacga gtcagcaacc 8161 aacaacaatc atacttaagc taaacaaccg aaatgtcgaa atattttgta agcagctcgt 8221 agtccaatcc atttaggcgt tttttccaaa ccaaacaatt tgcctaagca ggtggaagaa 8281 gaagtaaaac atcaacacac ccacactaga gcttgaaaat gatcgataaa taccgattcg 8341 ataatatcga tgttttcaag gcaaaacaca tatttaatat cgagaaagtg caaactgtcg 8401 atattttcca agctctaaca tacacacaaa acccacacac aacacactca cacataacca 8461 taaacaaata taatcccaaa aaacaaaaaa ccaaaaccga taacaaagtt aaagaacgat 8521 gaacaagctc taaaaattgt atttgccagt agtgggacaa caaacaacac gcttgattta 8581 attaactacc aaac