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LOCUS XM_070218771 3061 bp mRNA linear INV 09-DEC-2024 zydeco (zyd), transcript variant X4, mRNA. ACCESSION XM_070218771 VERSION XM_070218771.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3061 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3061 /gene="zyd" /note="sodium/potassium/calcium exchanger zydeco; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108065685" CDS 1075..2616 /gene="zyd" /codon_start=1 /product="sodium/potassium/calcium exchanger 3 isoform X3" /protein_id="XP_070074872.1" /db_xref="GeneID:108065685" /translation="MEDYWGLSSTTDINCTQPAIDDFPRDLFSEAQRQSGAVVLHVIA SLYLFVALAVVCDEYFVPAVEKICAALNMSNDVAGATFMAAATSAPELFVNVIGTFIT EGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTRDSIAYGVTVAILICVMH DERVEWYEALILVSLYAVYLAVMYFDKTFQKCAKELVENRICQNMANIQLNGGLNNDP PKATGTTSGGTTTISITTSAMTTAIGTTTHSVGAEGEGGRAAGDVPSEPGSIALMAQM DGGEAESQLAVAAADEDREEEGYSLLTYPKDKSCFAQFTWLIIWPIHLLFRIAIPDCK KAKNNKIFPLTFIMCIVWIGSLSYVVAWMITIIGDTLKIPDSVMGITFLAAGTSVPEA VSSVIVAKRGHGSMGICNSIGSNTFDILLCLGVPWLIKAVFFPIQPGQNYVAINSAGL EYSAITLLSTLFLLYLTFSTNKFKLDKKVGTACLVMYLVFMVFASLIELNVFFRVNLP TCGRS" misc_feature <1138..2568 /gene="zyd" /note="K+-dependent Na+/Ca+ exchanger; Region: 2A1904; TIGR00927" /db_xref="CDD:273344" polyA_site 3061 /gene="zyd" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtcggcggca tcaagacaat atacacacaa caacacaagc caaaccatat caaccaatta 61 aaaaaaaaac ataaatatag aggaagagaa gcagagatac taatcgcaac attttcgaca 121 gcgaacaagg aacgagaacg gaaacgatta cgaaaagatc gagattaatg tcagcgagta 181 caaagacgcg agtaaacgcg gatcgtaacg aattaaaacg gaacaaaacg ggaagaaacg 241 caaaaaacgc tgcgtaacgg gatatgcctt agtgtttttg ttgttgtgcc gtaaccttta 301 agtgagagtg tcaagagcaa ggtccagaac aaaagagata gatactgcag tcggacttct 361 actgctcgaa acccctaatc ttagacctaa ttaatctgaa cttcgaagtg tactatattt 421 aaaatatgtt tatttaaaga ctgcttagac tcacgaaacg aaatacaaag gtttcataac 481 cccaggagag taacacaaag tattttcttt ccggcggtaa aaggaaatag atttttgtgt 541 ctcgccgatt acatgagttt acaaaataaa atcgctgctt tgaaaaacaa atcgccatcc 601 acaaatcgtc cgactttcga acggaacgag atgcagaagc gtcttgtcga ggtgtaatcg 661 tgtgcgtgtg tgtggggtct cggtccgtgc gtggcagtgt gtgtcagggc ctcaattgcc 721 gccgttccgc catccgccat ccgccattca ccacccacaa ttccacccac cagggaactc 781 aacgtgccat tgtggaactg gatctttaga acaaattgag ataactctcg ccgtctcact 841 taagccgagc tgaaaagaga ctgaagccaa aggaaaagag atcatagaaa ataaagaaaa 901 gcaaaagaaa cgtgaataaa agaaaggcgc gggaggcgag agaaacgcga aaagaaaacg 961 gcaaaggaaa gaaagagaaa atcaacacca ttgaagtggg gattgagatt gcgcttcata 1021 caacggcgca tcgcagttta cgagtgtcca tcaccactac aacaccgtgc agcaatggaa 1081 gactattggg gtcttagcag cactacggat ataaattgca ctcagcccgc catcgacgac 1141 ttccccaggg atcttttctc ggaggcgcaa aggcagtccg gtgctgttgt acttcatgtt 1201 atagccagtt tatatttatt cgtagcctta gccgtagtgt gtgatgagta cttcgtgcca 1261 gcagttgaga aaatatgtgc agcactcaac atgtccaatg atgtggcggg ggccacgttc 1321 atggctgcgg ccacctccgc cccagagctg tttgttaacg tgataggcac ctttatcacg 1381 gagggtgata tcggagtggg cacgattgtc ggatcggcgg tatttaacat cctggcagtc 1441 gccgcctgtt gcggaattgg agctggaatg actatacccc tggactggtg gccgttgaca 1501 cgggacagta ttgcctacgg agttacagtg gccattctca tctgtgtgat gcacgacgag 1561 cgcgtcgagt ggtacgaagc cctcatcctg gtctccctgt acgccgtcta cctggcggtc 1621 atgtatttcg acaaaacgtt ccaaaagtgc gccaaagagc tcgtggaaaa tcgtatatgc 1681 cagaacatgg ctaacattca gctgaacgga ggactaaaca atgacccgcc gaaggctaca 1741 ggcaccacca gtggcggcac taccaccatt tcgatcacca cctcagccat gaccaccgcg 1801 ataggcacca ccacgcacag tgtcggagct gaaggagaag gaggaagggc ggcaggtgat 1861 gttccttctg aaccgggctc cattgccctt atggcacaaa tggacggtgg cgaggcagag 1921 tcccagctag ctgtggctgc cgctgatgag gatcgcgagg aagagggcta ctccctgctc 1981 acatacccga aggataagag ctgttttgca cagtttacct ggctcattat ctggccgatt 2041 catctcctat ttcgcatcgc catccccgac tgcaagaagg ccaagaacaa caagattttc 2101 ccgcttacct tcataatgtg catcgtctgg ataggatcgc tgtcttacgt ggttgcgtgg 2161 atgataacca ttatcggtga tacacttaag atacctgact cggtgatggg gattacattc 2221 ctggcggctg gaactagcgt tcccgaagct gtatccagtg tgatcgtggc gaagcgtggt 2281 cacggatcga tggggatctg caactcaatt gggtcaaaca ccttcgacat cctgctgtgc 2341 ctgggggttc cctggctaat caaagctgtc ttctttccga tccaaccggg acagaactac 2401 gtggccataa actcggctgg attggagtac tcggcgatca ctttgctgtc gacgctgttt 2461 ctgctgtatc taacgttctc cacaaacaag ttcaaattgg acaagaaggt gggcaccgcc 2521 tgtctggtga tgtacctggt tttcatggtt ttcgcctccc tcatcgaact caacgtgttc 2581 ttccgcgtta acctgcccac atgcggtcga tcatgagatg gatctgtatc cgatgatagc 2641 gcgatatacg aaggccgact tgtggagtat gaggtgtgga tgaacgattc accattttga 2701 atgaatggat ggagtgtaga aaggccagtc atctagtgct ggttccgttt tccgattcag 2761 tttccggcag ctggctggag tgcagtcgtt taattaatta atatgaattt tctgttctat 2821 tctatcttcc tcgatagttg agttacgtta tacgttatgc tgttattgta ataatacttt 2881 tttttttatt attattatta aagtagactc tttcacaacc ttcggttaga aaccaaatga 2941 aaaattgaaa atagatgaga agatatgaaa agaaattaaa gggcgaaaca caaaaccaaa 3001 accacactaa aaaatttaat aatgtattta tatgattaat atatatgaga tttaacaaag 3061 a