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LOCUS XM_070218770 3142 bp mRNA linear INV 09-DEC-2024 zydeco (zyd), transcript variant X1, mRNA. ACCESSION XM_070218770 VERSION XM_070218770.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3142 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3142 /gene="zyd" /note="sodium/potassium/calcium exchanger zydeco; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108065685" CDS 1075..2697 /gene="zyd" /codon_start=1 /product="sodium/potassium/calcium exchanger 3 isoform X1" /protein_id="XP_070074871.1" /db_xref="GeneID:108065685" /translation="MEDYWGLSSTTDINCTQPAIDDFPRDLFSEAQRQSGAVVLHVIA SLYLFVALAVVCDEYFVPAVEKICAALNMSNDVAGATFMAAATSAPELFVNVIGTFIT EGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTRDSIAYGVTVAILICVMH DERVEWYEALILVSLYAVYLAVMYFDKTFQKCAKGGVKQARSRSRSSNCSIHTKNSNE KEPELVENRICQNMANIQLNGGLNNDPPKATGTTSGGTTTISITTSAMTTAIGTTTHS VGAEGEGGRAAGDVPSEPGSIALMAQMDGGEAESQLAVAAADEDREEEGYSLLTYPKD KSCFAQFTWLIIWPIHLLFRIAIPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVAWMIT IIGDTLKIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNTFDILLCL GVPWLIKAVFFPIQPGQNYVAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKKVGT ACLVMYLVFMVFASLIELNVFFRVNLPTCGRS" misc_feature <1138..2649 /gene="zyd" /note="K+-dependent Na+/Ca+ exchanger; Region: 2A1904; TIGR00927" /db_xref="CDD:273344" polyA_site 3142 /gene="zyd" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtcggcggca tcaagacaat atacacacaa caacacaagc caaaccatat caaccaatta 61 aaaaaaaaac ataaatatag aggaagagaa gcagagatac taatcgcaac attttcgaca 121 gcgaacaagg aacgagaacg gaaacgatta cgaaaagatc gagattaatg tcagcgagta 181 caaagacgcg agtaaacgcg gatcgtaacg aattaaaacg gaacaaaacg ggaagaaacg 241 caaaaaacgc tgcgtaacgg gatatgcctt agtgtttttg ttgttgtgcc gtaaccttta 301 agtgagagtg tcaagagcaa ggtccagaac aaaagagata gatactgcag tcggacttct 361 actgctcgaa acccctaatc ttagacctaa ttaatctgaa cttcgaagtg tactatattt 421 aaaatatgtt tatttaaaga ctgcttagac tcacgaaacg aaatacaaag gtttcataac 481 cccaggagag taacacaaag tattttcttt ccggcggtaa aaggaaatag atttttgtgt 541 ctcgccgatt acatgagttt acaaaataaa atcgctgctt tgaaaaacaa atcgccatcc 601 acaaatcgtc cgactttcga acggaacgag atgcagaagc gtcttgtcga ggtgtaatcg 661 tgtgcgtgtg tgtggggtct cggtccgtgc gtggcagtgt gtgtcagggc ctcaattgcc 721 gccgttccgc catccgccat ccgccattca ccacccacaa ttccacccac cagggaactc 781 aacgtgccat tgtggaactg gatctttaga acaaattgag ataactctcg ccgtctcact 841 taagccgagc tgaaaagaga ctgaagccaa aggaaaagag atcatagaaa ataaagaaaa 901 gcaaaagaaa cgtgaataaa agaaaggcgc gggaggcgag agaaacgcga aaagaaaacg 961 gcaaaggaaa gaaagagaaa atcaacacca ttgaagtggg gattgagatt gcgcttcata 1021 caacggcgca tcgcagttta cgagtgtcca tcaccactac aacaccgtgc agcaatggaa 1081 gactattggg gtcttagcag cactacggat ataaattgca ctcagcccgc catcgacgac 1141 ttccccaggg atcttttctc ggaggcgcaa aggcagtccg gtgctgttgt acttcatgtt 1201 atagccagtt tatatttatt cgtagcctta gccgtagtgt gtgatgagta cttcgtgcca 1261 gcagttgaga aaatatgtgc agcactcaac atgtccaatg atgtggcggg ggccacgttc 1321 atggctgcgg ccacctccgc cccagagctg tttgttaacg tgataggcac ctttatcacg 1381 gagggtgata tcggagtggg cacgattgtc ggatcggcgg tatttaacat cctggcagtc 1441 gccgcctgtt gcggaattgg agctggaatg actatacccc tggactggtg gccgttgaca 1501 cgggacagta ttgcctacgg agttacagtg gccattctca tctgtgtgat gcacgacgag 1561 cgcgtcgagt ggtacgaagc cctcatcctg gtctccctgt acgccgtcta cctggcggtc 1621 atgtatttcg acaaaacgtt ccaaaagtgc gccaaaggtg gcgtaaagca ggcgcgttcg 1681 cgcagccggt cctccaactg cagcatacac acaaaaaaca gcaatgagaa ggaaccagag 1741 ctcgtggaaa atcgtatatg ccagaacatg gctaacattc agctgaacgg aggactaaac 1801 aatgacccgc cgaaggctac aggcaccacc agtggcggca ctaccaccat ttcgatcacc 1861 acctcagcca tgaccaccgc gataggcacc accacgcaca gtgtcggagc tgaaggagaa 1921 ggaggaaggg cggcaggtga tgttccttct gaaccgggct ccattgccct tatggcacaa 1981 atggacggtg gcgaggcaga gtcccagcta gctgtggctg ccgctgatga ggatcgcgag 2041 gaagagggct actccctgct cacatacccg aaggataaga gctgttttgc acagtttacc 2101 tggctcatta tctggccgat tcatctccta tttcgcatcg ccatccccga ctgcaagaag 2161 gccaagaaca acaagatttt cccgcttacc ttcataatgt gcatcgtctg gataggatcg 2221 ctgtcttacg tggttgcgtg gatgataacc attatcggtg atacacttaa gatacctgac 2281 tcggtgatgg ggattacatt cctggcggct ggaactagcg ttcccgaagc tgtatccagt 2341 gtgatcgtgg cgaagcgtgg tcacggatcg atggggatct gcaactcaat tgggtcaaac 2401 accttcgaca tcctgctgtg cctgggggtt ccctggctaa tcaaagctgt cttctttccg 2461 atccaaccgg gacagaacta cgtggccata aactcggctg gattggagta ctcggcgatc 2521 actttgctgt cgacgctgtt tctgctgtat ctaacgttct ccacaaacaa gttcaaattg 2581 gacaagaagg tgggcaccgc ctgtctggtg atgtacctgg ttttcatggt tttcgcctcc 2641 ctcatcgaac tcaacgtgtt cttccgcgtt aacctgccca catgcggtcg atcatgagat 2701 ggatctgtat ccgatgatag cgcgatatac gaaggccgac ttgtggagta tgaggtgtgg 2761 atgaacgatt caccattttg aatgaatgga tggagtgtag aaaggccagt catctagtgc 2821 tggttccgtt ttccgattca gtttccggca gctggctgga gtgcagtcgt ttaattaatt 2881 aatatgaatt ttctgttcta ttctatcttc ctcgatagtt gagttacgtt atacgttatg 2941 ctgttattgt aataatactt ttttttttat tattattatt aaagtagact ctttcacaac 3001 cttcggttag aaaccaaatg aaaaattgaa aatagatgag aagatatgaa aagaaattaa 3061 agggcgaaac acaaaaccaa aaccacacta aaaaatttaa taatgtattt atatgattaa 3121 tatatatgag atttaacaaa ga