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LOCUS XM_070218763 7063 bp mRNA linear INV 09-DEC-2024 (LOC108056049), transcript variant X2, mRNA. ACCESSION XM_070218763 VERSION XM_070218763.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7063 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7063 /gene="LOC108056049" /note="uncharacterized LOC108056049; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108056049" CDS 751..6291 /gene="LOC108056049" /codon_start=1 /product="uncharacterized protein isoform X2" /protein_id="XP_070074864.1" /db_xref="GeneID:108056049" /translation="MPRFRNEEPEQSHYSDGDVVWVKIHNTEIWWPGEVTLSQDFRFV NSSRPPFAVVAFFNEKTFEQVKSPKLIYPFQCDHKEEFIKRGTKKADGMHMGDKFSDD VAIAESRYRRHQVLGLHADRSSVIGDGGTGSGSGSGNGGAGGSAPRPDSLIKAFLSSS SSISGGSSMGHNNSGRSSSGVPSPAGIRQAPTFRIMDIGGGGGSSASDPPRDRTFDEA SYECNMCTFRTNSMSVLLIHRRAHLESSSSFSSSNSNSTSTTASTSHQSSMLLNVGTR KTRAARARAHTTTSSQQPFHRSSVRCHSRHVSIVVDAPLTNEEQKMVKSIAKQTLASI EMVVRPGEDSSSAASNRNSSSSSSVTPPANPRDPRGQQRSSNQLRATMPAPQSPPAKQ RRLTRSMSRRQRGGGEAISPPAATPELLLPPPPAMQTPRRGANRRCTLAATEQLPSIT RRGNPLRKTLTTAPVESKEKLEKLEKEKPPRSAGRRKRTFSRSRTAMTERDRPLIIHS SPPPTKREMETAKEKAKVVEMEMEAEPELPSTASLEADLQEKQQKEKENLPQSSIDAS KQLQLSLMAEWGDDETDESLEEPPVNKETVLEAPPPAEQKAEENEELEEEELEEQLEK TDDLEGMKKKRSIRNIPKKDRRDVVVQEFQPELPEDEPQMDVEEEQEEPIVIPDSDAS SNGSVVFVEDEPRQRGGRAGIHAHPNGNGNDKAATSSSSVKAVVPSCFDFEEEEEELL LQPEQPDGHGNGLSYRRRTNTNRCLIDVNGKSHAEEEEEERPAEVETAGGAAQELDGG LFKGFEDLQEPIAAVETEKVPEPEPKSPEKQEELPVEPEEAAPSEEPATEGDHLSLPI KERQKRIFKSRNKSIAVATQEEEEEEEVTPPLQEEQEEQEEKQEQQEEVDTSLLFNGA KSRSSSGDAMESLGSRSRNKRRNKSKTESNRRPAKLTNLQNLQKELLHEELSNNSSSS SGSSSNQASSSSSSSDSHCRLSPEPSSSNSCSIASNIAVISAEEARELQRSASGAGLI HAAIVDATQPVQRGGVLILEDIRLPNLYEPFGSLQSSSTDSNGSRQTNSQQPEDNDEQ SQDTTTEEQLEKNEEQEQVVEEIEEVEEVEEAEEDEEEEQMPDDEPAEQPEQHLNQDQ EEEQKEPPDNWSPERQSPAEEEVRLLPQAREVLLKKREQELLRQYEADLVSGRSAEKC RQARARWSRTMPRSPEEEEEEAAAAEELELMEVEEEEGPVKEDEELPEEEELQLQPME EEEPLEDTETSLDEQLAAVELVLPATLFSSSSSRRPASHPPVTPVQSLPPSTQPARHL SCARTLSDADVAKAHQQLVDLREQQRLRSTSTSPTAAAVLTPPETLLQQTSGQRRTRR RSRNAGSSSGGDHVMTMESGTRSDVAEESSCETKDGQESPENPPQLCAGRICAVMTRP IPGYSHTFMLCSLNNNNFTPLNNVALYLDNEKNHLVPVPREALLEPPRLADGHPLSAV FADIDFLGGEAVAQVVEPSEAEDLGQSQDLSPRHLSPQMLLSEAAAAAGGEQDVDAMG IMTPLSQVGGNITGAAGGSSSYVNEEEELSLHEEQLQANVLQLNVNGHRLDLDPSMLF SIAEQPDSCIEVSVTETTGGSGGSGGSQLTGGMRAVLQARDILQAAEVYLQERDLQLV TLGDEDEATDGGLPVTAGTDLLSQALASADDDDEDDDTAVDFVNAANAGVGLLHIDTR TGGASLLHVGGSEVFISHPMAHPQNVHLTPPITARTNETNALLDQTPIMSTLENPSSS MQLRRVSPLVEGNLEDSLAVIGVTNGSGVPTSLELPITVTNPAIASRMAAPVADMLQF APFQ" misc_feature 799..1071 /gene="LOC108056049" /note="PWWP (Pro-Trp-Trp-Pro) domain; Region: PWWP; cd05162" /db_xref="CDD:438958" misc_feature order(829..831,841..843,916..918) /gene="LOC108056049" /note="putative methyl-histone binding site [polypeptide binding]; other site" /db_xref="CDD:438958" misc_feature 835..846 /gene="LOC108056049" /note="PWWP sequence motif; other site" /db_xref="CDD:438958" polyA_site 7063 /gene="LOC108056049" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgtttctcca cctctaacgg gaacttctaa ttcgctgcgg gtattttttt tgtgtttgtt 61 gttacatata atccgatcaa tttcgatcgt tcgtttcgca aatcagtgtc cgctgctccc 121 gaccgtcgac attttggcca atttcgggcg ggcgtcatcg aaacgttcag tttgcctcgc 181 tctcgctccg tttcggtttt tccgtgcctc ttttttttgg tccgttttcg tttcgttttc 241 gttttccact tggaatcgcg aggggatgac ggcaggggag gtggaggtgc atccccaatc 301 caatgcaatt gtagctgagc gcgctcataa aaatcaaaag tatatttaga tatacatgta 361 tatataataa tcggatacgt tttctcatcg ccctcgcgcg cgtgtgtgtg tgtgtgtatt 421 taaatcagta atattgtgtg cgtgtgccga gcgcgcagcg ttttgttgtt gagtgcgagc 481 gagacggcgg ccggggaaac agagagagaa acaggaactg caacaaaaac attcagctgc 541 aacaacaaca agaaccacat tcagcagcag ctgcagcagc gatgacttcc agtcgctgca 601 ctggcatagc gctgcctgga agcgtattgg gatgccgatg cctcctcgtc ctcgtctgct 661 aggattacgt ttattaccgc gcaacaacga accatcccag agacagcaag gatccaggag 721 aaagaccagg actcctctag aaccggcaca atgccacgct ttcgcaacga ggagccggag 781 cagtcgcact acagcgatgg cgacgtcgtc tgggtgaaga tccacaacac ggagatctgg 841 tggcccggcg aagtgaccct ttcgcaggac tttcgcttcg tcaactccag ccgaccgcca 901 ttcgcagttg tggcgttttt caatgaaaaa accttcgagc aagtgaaatc accgaaattg 961 atatacccct ttcaatgcga tcacaaggag gagttcatta aacgaggcac caaaaaggcc 1021 gatgggatgc acatgggcga caagttcagt gacgatgtgg cgatcgcgga gtcgcggtat 1081 cgccgtcacc aggtcctcgg cctgcatgcc gatcgatcgt cggtgatcgg tgacggggga 1141 accggaagcg gcagcggaag cggaaacgga ggagcaggcg gaagtgcccc ccgaccggac 1201 agcctcatca aggccttcct ctcgagcagc agcagcatca gcggaggcag cagcatggga 1261 cacaacaaca gtggccgcag cagcagcgga gtgccttcac cagcggggat tcgacaggcg 1321 cccactttcc gcatcatgga catcggagga ggcggcggct cctccgccag cgatccacct 1381 cgcgatcgca ccttcgacga ggccagctac gagtgcaaca tgtgcacctt tcgcaccaac 1441 agcatgagcg tcctgctcat ccatcggcgt gcccacttgg agtcgagcag cagcttcagc 1501 agcagcaaca gcaatagcac cagtaccacc gccagcacca gtcaccaatc ctcgatgctc 1561 ttgaatgtgg gaacccgcaa gacgcgtgcg gcacgcgcca gggctcacac caccaccagc 1621 agccagcagc ccttccatcg cagctcggtg cgctgccatt cgcggcacgt ctccattgtg 1681 gtggatgcac cgctgaccaa cgaggagcag aagatggtga agagcattgc caagcagacg 1741 ctggccagca tcgaaatggt ggtccgtccc ggcgaggata gctcctccgc cgcctcgaat 1801 cgtaatagta gcagctcatc gtcggtaacg ccgcccgcga atccccggga tccgcgtggc 1861 cagcagcgca gctccaatca actgcgtgcc accatgcccg ccccacaatc gccgccggcg 1921 aagcagcgtc gacttacccg ctccatgagc aggcggcagc ggggaggagg agaagctatc 1981 tccccaccag ccgccactcc agagctccta ctgcctcctc cgccagcgat gcagacgcca 2041 cgcagaggag ctaacagaag atgcactttg gctgccacag agcagctgcc ttcgatcacc 2101 aggcggggta atcctctccg caaaacgctg accacggcgc cagtggagag caaggagaag 2161 ttggaaaagc tggagaagga gaagccacct cgaagcgctg gtcggcgcaa gagaaccttc 2221 tccaggagta gaacagcgat gactgagcga gatcgtccgc taatcatcca ttcatcgccg 2281 ccgccaacga aaagggaaat ggaaacggct aaggaaaagg ctaaggtagt ggaaatggaa 2341 atggaagcgg agcctgaact gccctccact gcctcgctag aggctgatct tcaagagaag 2401 cagcagaaag agaaagagaa tctcccgcag agcagcatcg atgcctccaa gcagctgcag 2461 ttaagtttga tggccgaatg gggcgacgat gagacggatg agtcgctgga ggagccaccg 2521 gttaataagg agacggtatt ggaagctcct cctccagcag agcagaaagc agaggagaat 2581 gaggagctag aggaggagga actggaggag cagctagaga agactgatga cttggagggc 2641 atgaaaaaga agcgcagcat tcgcaatata ccaaagaagg atcgccgcga tgtggttgtg 2701 caggagtttc agccagagct gccggaggat gagccccaaa tggatgtgga ggaagagcaa 2761 gaggagccga ttgtcatccc cgacagcgat gccagctcca atggtagcgt cgtgttcgtg 2821 gaggacgagc caaggcagcg aggaggcagg gcaggaatac atgcgcatcc caatggcaat 2881 ggcaacgaca aggcggccac atcctcatcc tcagttaagg cggtcgtgcc ctcttgcttt 2941 gatttcgagg aggaggaaga ggaactgctg ctgcagccgg agcagccgga tggtcatggg 3001 aatggcttga gctacaggcg tcgcaccaat acaaatcgat gcctcatcga tgtgaatgga 3061 aaatcgcatg cggaggagga ggaggaggag cgaccagcgg aggtggagac tgctggagga 3121 gctgcccagg aactggacgg tggcctcttc aagggctttg aagatttaca ggaaccaatc 3181 gcagccgttg agacggagaa agtgcctgaa ccggagccca aatcccctga gaagcaggaa 3241 gagctgccgg tggagcccga ggaggctgct ccaagcgagg aaccggccac cgagggcgat 3301 cacttgagcc tgcccatcaa ggagcgtcag aagcgcatct ttaagtcgcg caacaagtcg 3361 attgcggttg caactcagga ggaggaggag gaggaggagg ttacaccgcc actgcaggag 3421 gagcaggaag agcaggaaga gaagcaggag cagcaggagg aggtagatac ctcgcttctc 3481 ttcaacggcg ccaagagccg cagcagcagt ggtgatgcca tggagagcct gggcagccgg 3541 agcagaaata agcggcgcaa caaatccaag actgaatcaa accgtcgacc ggcgaagctt 3601 acgaacctcc agaacctcca gaaggagctc ctccacgagg agctgagcaa caacagcagc 3661 agcagcagcg gcagtagcag caaccaagcc agctccagct cctccagctc ggactcccac 3721 tgcaggcttt ccccggagcc gagctccagc aacagctgtt cgatagcctc gaacattgcg 3781 gtcatttcgg cggaggaggc acgcgaactg cagcgctcgg cctcgggcgc tggattgata 3841 catgcggcca ttgtggatgc cacacagccg gtgcagcgag gcggtgtgct catcctggag 3901 gacatacgac tgcccaattt gtacgagccc tttggcagcc tgcagtcgtc ctccacggac 3961 agcaatggca gcaggcagac gaactcacag cagccggagg ataatgatga acagtcgcag 4021 gacacgacga ccgaggagca gctggagaag aatgaagagc aggagcaggt ggttgaagag 4081 attgaggaag ttgaggaggt tgaggaggct gaagaagatg aggaggagga gcaaatgcct 4141 gatgatgaac cagccgagca gccagagcag catctaaatc aagatcagga ggaggaacag 4201 aaggagccac cggataactg gtcaccggag cgccaatcgc ccgccgagga ggaggtgcgc 4261 ctcctgccgc aggctcgcga ggtgctgctc aagaagcgcg agcaggagct gctgcgtcag 4321 tacgaggctg acttggtcag cggtcggagt gcggagaagt gtcgccaggc acgcgcccgc 4381 tggagccgaa cgatgccgcg atcccccgaa gaggaggagg aagaggcggc ggctgcggag 4441 gagctggagc taatggaggt ggaggaggag gagggtcctg tcaaggagga tgaggagctg 4501 ccagaggagg aggagctgca gctgcagcca atggaggagg aggaaccgct agaggacacc 4561 gagacctccc tggacgagca gctggccgcc gtggagctgg ttctgccggc caccctgttc 4621 tcctcgtcct cgtcccgtcg ccccgccagc cacccgccag tcactcctgt ccagtcgctt 4681 cccccctcga cgcagcccgc ccggcatctc agctgcgccc gcactttgag cgatgcggac 4741 gtggccaagg cccaccagca gctggtggat ctgcgggagc agcagcgcct ccgttccacc 4801 tccacatcgc cgacggcggc ggctgtgctg acgccgccgg aaaccctgct gcagcagacc 4861 agcgggcaac ggaggacgcg tcgccgctcg aggaatgcgg gcagcagcag tggtggtgac 4921 catgtgatga ccatggagag tggaacccgc agcgacgtgg ccgaggagtc gtcgtgcgag 4981 accaaggatg gtcaggagag ccccgagaac ccgcctcagc tgtgcgctgg acgcatctgc 5041 gcggtgatga ctcgcccgat ccccggctac agccacacct tcatgctctg ctcgctgaac 5101 aacaacaact tcacgccgct gaacaacgtg gctttgtacc tggacaacga gaagaaccac 5161 ttggtgccgg tgccgcgaga ggcgctcctg gagcctcccc gcctggccga tggccatccg 5221 ctgtccgccg tctttgcgga cattgatttt ctgggcggcg aggcggtggc ccaggtggtg 5281 gagccctcgg aggcggagga tcttggccag agccaggatc tctcgccgcg ccatctatcc 5341 ccgcaaatgc tgctcagcga ggcagcggcg gcggcgggcg gcgagcagga tgtcgacgcc 5401 atgggcatta tgacgcccct cagccaggtg ggaggcaaca taacgggagc cgccggcggt 5461 agcagcagct atgtcaacga ggaggaggag ctgtcgctgc acgaagagca gctgcaggcc 5521 aatgtgctgc agctgaatgt gaacggccat cggctggatt tggatccctc gatgctgttc 5581 agcattgccg agcagccgga ctcgtgcatc gaggtgagcg tcaccgagac gacgggtgga 5641 tcaggtggct ccggtggctc ccagttgact ggaggaatga gagccgtgct gcaggctcgc 5701 gacattctgc aggcggcgga ggtttacctg caggagcgcg atctccagct ggtcacgctg 5761 ggcgatgaag atgaagccac cgatggcggg ctgcctgtaa ccgccggcac ggatctgctc 5821 tcgcaggctt tggccagcgc tgacgacgac gacgaggatg atgacacggc ggtggacttt 5881 gtgaacgcag ccaacgctgg cgttggcctg ctccacatag acacccggac cggcggcgcc 5941 agtttgctgc atgtgggtgg cagcgaggtg ttcatctccc atccgatggc tcatccgcag 6001 aatgtccatt tgacgccgcc gataacggcc cgcaccaatg agacaaacgc cctgctcgac 6061 cagacgccca tcatgtccac gctggagaat cccagcagca gcatgcagct gcgtcgcgtt 6121 tcgccgctgg tggagggcaa tttggaggac agcctggccg tgattggggt gacgaatggc 6181 agcggagtgc ccacctcgct ggagctgccc attacggtga ccaatccggc gattgcctcg 6241 cggatggcgg cccccgttgc cgacatgctg cagtttgctc cgtttcagta ggatgagtag 6301 gagcagcaca cagtccaaga gcagatgaac ttgctttatt tttcctaaga ttaagaaacc 6361 ttttgttaga ataagtagaa atgcagctaa tgcattttat gttgagttag ttaaattgac 6421 aagataacaa gaggatattt agtggcctag attcctcgac ttgaccttat ccacattgca 6481 aatgtaggat agaaaaggaa tcccatttgc acgtaaaaga tttaataact attggttaga 6541 agcgaataag tagagcaagt gcaatggaag ctgttcggca ccaaaggaaa aacctacgaa 6601 gagttcacag gaagcacatt tatatttata tttaacgacc ataaatgact ataccaatgt 6661 gtgtaagata tgtcagtctc taagctaaca gataaaagat aacagatgat gtaaagtgag 6721 agagtgtcct cgcccagaag aataaaaaaa ggcaaatgtg caacaaagat atattttttt 6781 tattgccacg gatcgtattt aagcaacctt cttctagtaa gcgtcaagac aaagcctaat 6841 tttaattgac accagtgact tattttggtt ggttcggttc tgacaagttg aattaattaa 6901 atacgctgta tttaactttt tttttttttc gtttctccaa aaagcaaaac gttttgtgtc 6961 aaaattatat gcattttcaa cgaacgagaa tctacgcatg tacagtttat tttttgaaaa 7021 tacaaccaaa tataaataaa taaataaatg tatggaaaaa taa