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LOCUS XM_070218762 2342 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_070218762 VERSION XM_070218762.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2342 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2342 /gene="LOC108054574" /note="calphotin; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054574" CDS 16..2151 /gene="LOC108054574" /codon_start=1 /product="calphotin" /protein_id="XP_070074863.1" /db_xref="GeneID:108054574" /translation="MQKASPRWSSVNRLRSLGALLPLIFVTPVKMKPFAFVVVAALSL LSAVQGRPGASGYLPPLPVKEVSSAAPNFQQLIQSQIQTQLPHIQTHVESIQASIPLA SFTIQSGGQQSYQQSAPVSVSIPAAAAPVSVSIPAPAPVPVEQPLPAPQVIYEPPKPI VATQTAVRNAYLPPTPAVQQQFVPSPEPVVETVAPQQETITTTYSAPAPVLVPAVHEQ HQVIQQSYSAPAPITQQTYSAPAPAPAPVSVPVSAPVVQEQFYSGPASAPVAQQTYSA PASAPVAQQTYSAPASAPVAQQTYSAPAPITQQTYSAPAPAPAPVSVPVSAPVVQEQF YSAPTSAPVAQQTYSAPASAPVAQQTYSAPAPITQQTYSAPAPAPAPVSVPVSAPVVQ EQFYSGPASAPVAQQTYSAPASAPVAQQTYSAPASAPVAQQTYSAPAPAPITQQTYSA PAPVPVPVPVSAPVVQEQFYSAPASAPVAQQTYSAPASAPVAQQTYSAPASAPVAQQT YSAPAPITQQTYSAPAPAPAPVSVPVSAPVVQEQFYSAPTSAPVAQQTYSAPASAPVA QQTYSAPAPITQQTYSAPAPAPAPVSVPVSAPVVQEQFYSAPASAPVAQQTYSAPASA PVAQQTYSAPAPAPVQLQQSFVPAPPAPIQHVQQPSQPIVQYSPPAVQQQVTYTQTAP APISVQVPVPVQKAEIGTHYAANGGYLYK" misc_feature <376..>2067 /gene="LOC108054574" /note="DNA translocase FtsK; Provisional; Region: PRK10263" /db_xref="CDD:236669" polyA_site 2342 /gene="LOC108054574" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agcagccaac tataaatgca gaaggcatct ccaagatggt catcagttaa tcggttgcgt 61 tcgctcggtg cacttctccc tttgattttt gtgaccccag tgaagatgaa accctttgcc 121 tttgtcgttg tggctgccct cagcctgttg tccgctgtcc agggacgtcc gggtgccagt 181 ggatatctgc caccccttcc ggtcaaggag gtgtcttccg ccgcccccaa cttccagcag 241 ctcatccagt cgcagatcca aacgcagctg ccccacatcc agacgcacgt ggagtccatc 301 caggcctcca ttccgctggc cagcttcacc atccagtcgg gcggccagca gagctaccag 361 cagagtgctc ctgtctcggt ttcgatccca gctgccgctg ctcctgtctc ggtttcgatc 421 cctgctcctg cccctgttcc cgtggagcag cccctgcctg ctccgcaggt gatctacgaa 481 ccacccaagc ccattgtggc cacgcagacg gcggtgagga acgcctatct gccacccact 541 ccagcggtcc aacagcagtt tgtgccctct ccggaaccag tggtcgagac cgttgcccca 601 cagcaggaaa ccatcaccac cacttactct gctcccgctc cagttttagt tccagctgtc 661 catgaacagc atcaggtgat ccagcagtct tactctgctc ctgctcctat cactcagcaa 721 acttactctg cgcctgctcc tgcacctgct cctgtttctg ttccggtttc tgctccagtg 781 gttcaggaac aattctacag tggtcctgct tctgctccag ttgctcagca aacttattct 841 gctcctgctt ctgctccagt tgctcagcaa acttattctg ctcctgcttc tgctccagtt 901 gctcagcaaa cttactctgc tcctgctcct atcactcagc aaacttactc tgcgcctgct 961 cctgcacctg ctcctgtttc tgttccggtt tctgctccag tggttcaaga acaattctac 1021 agtgctccta cttctgctcc agttgctcag caaacttatt ctgctcctgc ttctgctcca 1081 gttgctcagc aaacttactc tgctcctgct cctatcaccc agcaaactta ctctgcgcct 1141 gctcctgcac ctgctcctgt ttctgttccg gtttctgctc cagtggttca ggaacaattc 1201 tacagtggtc ctgcttctgc tccagttgct cagcaaactt attctgctcc tgcttctgct 1261 ccagttgctc agcaaactta ttctgctcct gcttctgctc cagttgctca gcaaacttac 1321 tctgctcctg ctcctgctcc aatcactcag caaacttact ctgcgcctgc tcctgttcct 1381 gttcctgttc cggtttctgc tccagtggtt caggaacaat tctacagtgc tcctgcttct 1441 gctccagttg ctcagcaaac ttattctgct cctgcttctg ctccagttgc tcagcaaact 1501 tattctgctc ctgcttctgc tccagttgct cagcaaactt actctgctcc tgctcctatc 1561 actcagcaaa cttactctgc gcctgctcct gcacctgctc ctgtttctgt tccggtttct 1621 gctccagtgg ttcaagaaca attctacagt gctcctactt ctgctccagt tgctcagcaa 1681 acttattctg ctcctgcttc tgctccagtt gctcagcaaa cttactctgc tcctgctcct 1741 atcacccagc aaacttactc tgcgcctgct cctgcacctg ctcctgtttc tgttccggtt 1801 tctgctccag tggttcagga acaattctac agtgctcctg cttctgctcc agttgctcag 1861 caaacttatt ctgctcctgc ttctgctcca gttgctcagc aaacttactc tgctcctgct 1921 cctgctccag tgcagctgca gcaatccttt gtgccagcac cacctgcacc tattcaacat 1981 gtccagcagc catcccaacc cattgtgcag tactccccac cggcggtgca acagcaggtg 2041 acctacaccc aaaccgctcc tgctcccatt tcagttcaag ttccagttcc ggttcagaaa 2101 gccgagatcg gaacccatta cgccgccaac ggtggttacc tgtacaagta ggatgcttgt 2161 gaacggaccc cagcggaggt ccgaactcgc atcgagttga ggatcgaacg ttaatcgctg 2221 atgtgttcat ctgaacttag tgttacgtag ccaatttcta gcacattttt ttatggttat 2281 acaatttttg atgttacgct tttgttaatc aataaactgt ttttgttata taaaaaaata 2341 aa