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LOCUS XM_070218755 7391 bp mRNA linear INV 09-DEC-2024 variant X6, mRNA. ACCESSION XM_070218755 VERSION XM_070218755.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7391 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7391 /gene="Sec16" /note="Secretory 16; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108062963" CDS 181..7002 /gene="Sec16" /codon_start=1 /product="uncharacterized protein Sec16 isoform X3" /protein_id="XP_070074856.1" /db_xref="GeneID:108062963" /translation="MLHNNAPWLPPHQQQQQQQQQAPQQHATPQQQQQQQQPHPAQQQ HQQHQQLYASQMFQQQQPNYWPEDQQQQQQSLNYNNYFAGQQQQLPLQQQQQQLPLQQ QQPQQPTQQQHNIQQQLYYPTHQQPQVPAPAEPALDSFDNNNSGGGGGGGGWGDWGDW NDNSNNNNSLSNEALLEPSGQLLEDSFNVQSSPGSWQAFATGNSVNNNVELPPPTDQQ AASLPQQPEVGQEPELDAIVPPQAFQNQPPTSLSAFAAPPFAVVAPPAPLAGGVAPPT DAAGIAPPAALPPSLTPAAGNPFKRSAGLNKRVNIMASPAGGAPSPPAPAVAPLAPPV APPPGEAHGDGFNLLAAPPVEASPGAPIPAATASLYAQPAVDNQEVLSAPNDERAQYL QTSHLSEQLGEGEADQDAGLLPPPGLSRLVLGQPELDSQQQRLVTGATEQPALDVAQA AALHMQERQADGEDTSDDGGQQVRNIQTPPRRVVTGVETNAPSLREQVLDGENLEDRE AIPPPALAELPPTLSVHHNIQPDEPELQLHHINQPPQAVTPQPQQPQQPQLPLLQQQQ PQQQEKKRAAAGGRRANASLDLESEDESDEFLQSERERDRERERRDLMDERQGRGRSH GHYTYDGETEDSVRGAAHHETKSLRETQHRRSNNHDSTRSRRHPAEPKAERERERERE RDRERERHWRRRSNKYHSGGEDQERSYDHSRRYNNSNYDGESDNPEINHLGEGELDGG GTEGRGGGGRSSKTGRSQRRSAAEEPSFDYYEPERDRDHDRQYSRRSNKQPSSADKSR SSGGRRSYENQGRSGRPEEGRRRHQDLRNWDGGYEEYRRKSSRNSDLEKERINGGNTS GGGGGGSGGGGSGSGKRRNQYDQYGGAYDSYSMYEQMSRNPHAYADMYAKFYGQMINS MTAAAVSAAASKSGVPGGAAAAAAAIPGLVPGAVPVSAAQLVAAAAAASGGSVSGSSE AALLRERERYTHAYITQANEFHRQQYKELIYQQQQQQQQQQHHREDPLNSSFNITEDN ASFYGSRGGSIYNQYHPYPSLSSARSLSNLNGDGRNSRCGPYYAGSECGLDIRAAAEA APSTYGGLATAGTVTTTAVARPPRRRTPLQFNRPHLVASYAMSLLLKVKPKYAGRGRL RNDVEVAPPRIRDGTSSLLRMYPGPLQGRKLHKDKIISFCKEQIRLGPTKGCTVLYAT QKSPQGSVVKYRASHALMWHLLILLLRQNGYIADTDVGDLLLENQQEYPYEPSEYEAE NEPDVEAEQEAAAPGEKSVESDLDSESAAGAAAATPEETPAGGATNGGDAGAPQSPLS EQAATDKFRSYVLRGNVEEALQWATDNGLWTHAFFLALYEDRYALTDVAQKFLNRAIK ANDPLQTLYQMKSCQTPACVSQLRDEQWGDWRSHLSILVTNKSRQPKYDRSSVVALGD TLFQRGDIYAAHFCYLVAQEEFGRYDSSATELTTLTANVPRLILLGSSHYKHFNEFAS NEAIIMTEIYEYARSLFDPKFSIAHFQHYKFLLATRILDYGQHFRCTNYLEQIARHIE LKPESYDIDFIQRVCGLAERLRYHDPILINRVSFASPPNAASKDSAAPEEKAWLRQLR SLADVQPQQEQLQLHHQVQQQQQEQNDIDQQFAEVNKQFRELNMQYDGGNLESTLQTQ LPPVEQQQQPAQSEVPPPQQQYYEPPPAAAAAAAQVPAESDPYGQQQGSYYDPNAGMQ HQYDPNAGIQHQYDPNTEAHHQYEHGQIEPASEAYQPAADPSAAPAGYGYDYWSGTQQ PPYGDEPALKDEAEEEEDEQQILQQAQQQQQLRVAKQQQEQHTRTNGAANSNNNRFKS NALKQEKGSSITALRKRQEASRTATIAAAAAAIAQITPAKVATAAAAATTTAATSAKA FNLNDVSSFSHIHKRHQATSSSSSNNKPATATAAAATFTTVAALPNQLPSCRKSNSQN RTYLGTPKTLTTPTRFIAAKAATVTATPTAPTTLTTTSTSLGARGSSTKRVNFNLPTT IAESEQEFQHELNFEEADEEQEEVEEDEEENALALAQARPSGHLSRKPHIVFNGTYPI DMPLTQSKSSSYDPEANADRGDLQRYRNYMLHDYVIDEDAEGEEQAQEEQEEDEYADE DLFPYAHDADESFDDGDYYTHELLNKYGIIPSKEGAQRTPATVEAATITSNSASKPQH VWSMEELIANPAIPLNYKKMCTEVEQSLSRFESYLDSKKEQQQMPPPLAAVRTFDIDA PTRRGHRSSTSSANAGLALRSKKKL" misc_feature <811..1302 /gene="Sec16" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature 3682..4911 /gene="Sec16" /note="Ancestral coatomer element 1 (ACE1) of COPII coat complex assembly protein Sec16; Region: ACE1-Sec16-like; cd09233" /db_xref="CDD:187750" misc_feature order(4147..4152,4156..4161,4165..4179,4183..4185, 4189..4191,4219..4221,4225..4227,4231..4236,4240..4245, 4255..4257,4273..4275,4294..4296,4324..4326,4339..4341, 4348..4350,4432..4437) /gene="Sec16" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187750" misc_feature order(4678..4680,4744..4749,4753..4758,4765..4770, 4777..4779,4858..4863,4870..4875,4882..4884,4894..4896) /gene="Sec16" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:187750" ORIGIN 1 cgaaagtcga gttggcattt gggagatttg ctgtgttcgg atcgaaaaaa ttccaaagtt 61 aattgtttaa aagccaagac gactgcttta gcaatcagcc aacaagtaaa tgtattgttt 121 agtcaactgc cagaggacag taccaagtgc gtgtaaataa acgagcgatt tgtatccaac 181 atgttgcaca acaatgcgcc ctggctgcca ccgcatcagc agcagcagca gcagcagcaa 241 caggccccgc agcaacatgc aacgccccaa cagcagcagc agcagcagca acctcatcct 301 gcacagcagc agcatcagca gcatcagcag ctctacgcca gccaaatgtt ccagcaacag 361 cagccaaatt actggccgga ggatcagcag cagcagcagc agtcgctgaa ctacaataac 421 tactttgcag gacagcagca gcaactgcca ctgcagcagc aacagcagca actgccactg 481 cagcaacagc agccacaaca gcctacgcag cagcaacata atatccagca gcaactgtat 541 tatcccactc accagcagcc acaagtcccg gctccagcgg aacccgctct ggactcgttt 601 gacaacaata atagcggcgg aggaggagga ggaggtggct ggggtgattg gggcgattgg 661 aacgacaata gcaacaacaa taatagcctt agcaacgagg ccttgctgga gccatcgggg 721 caactgctcg aggactcctt caatgtccag tcctcgccag gcagttggca agcctttgcc 781 accggcaata gtgtcaataa caatgtggag ctgccgcctc caacggatca gcaggcagca 841 tcattgcctc agcagccgga ggttggtcag gaacccgaac tggatgccat tgtgccgccc 901 caggctttcc aaaaccagcc accaacatca ctttctgcgt ttgctgcacc accatttgct 961 gtggtagctc ctccagcgcc tcttgccggc ggggtagctc caccaacgga cgccgctggc 1021 attgcaccac cggctgcact gccgcccagc ttgactccag cggctggcaa tcccttcaag 1081 cgctccgcgg gcctcaataa gcgagtgaac ataatggcca gtccggcggg cggagctcct 1141 tcaccaccag caccggctgt agcgccatta gctcctccag ttgccccgcc tcccggggag 1201 gcccatggcg atggcttcaa cttgctggcg gcaccacctg ttgaggcttc accaggtgcc 1261 ccaattcctg cagcaaccgc atcgctgtac gctcagccag cggtggacaa ccaggaggtg 1321 ttgtccgccc ctaatgacga gcgggcgcag tacctgcaga cgagtcacct gtccgagcag 1381 ctgggcgagg gcgaggcgga tcaggatgcg ggtctgctgc cgccaccggg cttgtcccgt 1441 ctggttctgg gccagccgga gctggactcg cagcagcagc gcctggtcac cggcgccacg 1501 gagcagccgg cgctcgatgt cgcccaggcg gctgccctgc acatgcagga gcgtcaggcg 1561 gacggcgagg acacctcgga cgacggcggg cagcaagtgc gcaatataca gacgccaccg 1621 cgtcgcgtcg tcacgggcgt ggagacgaac gcaccatcgt tgagggagca ggtgctggat 1681 ggtgagaatc tggaggatcg cgaagccatt ccgccaccag cgctggccga acttcccccg 1741 acattgtcgg tacatcacaa tattcagccc gatgagccgg agctgcagct gcatcacatc 1801 aaccaaccgc cgcaggcagt caccccgcaa ccacagcaac cacagcaacc gcagctacct 1861 cttctacagc agcagcagcc gcaacagcag gagaagaagc gggcggcggc ggggggacgt 1921 cgcgcgaatg cctcgctgga tctggagtcc gaggacgagt cggatgagtt cctgcagagc 1981 gaaagggagc gcgatcggga gcgcgagcgc cgggatctga tggacgagcg gcagggccgc 2041 ggacgcagcc atggtcacta cacctacgat ggcgaaacgg aggactcggt acgcggtgct 2101 gcccaccacg agaccaaatc gctgagggaa acgcagcaca ggcggagcaa caatcacgac 2161 tcgacgcgat cgcgtcgcca tccagcggaa ccgaaggccg agcgggaaag ggaaagggag 2221 cgggaacggg atagggagcg tgagcggcac tggcggcgac gctcgaataa gtatcacagt 2281 ggcggcgagg atcaggagcg ttcgtacgat cattcgcgtc gctacaacaa cagcaactac 2341 gacggcgaat cggataatcc cgagatcaat catctcggcg agggagaact cgatggcgga 2401 ggcactgagg gaagaggagg tggtggccgg agcagtaaaa ccggccgcag ccagcgacgc 2461 agcgccgccg aggagccgtc gttcgactac tacgaaccgg aacgcgatcg tgatcacgat 2521 cgtcaatact ccagacgctc caacaaacag ccatcgtcgg ccgacaaatc gcgatcgtcg 2581 ggcggacgac ggagctacga gaatcaggga cgcagtggcc gcccagagga gggtcgccga 2641 cgtcaccagg atctgcggaa ctgggacggt ggctacgagg agtaccgccg gaagagctcg 2701 cgcaacagtg atctcgagaa ggagcgcatc aacggaggca acaccagcgg cggcggcggc 2761 ggtggcagcg gaggaggtgg ttccggttcc ggcaagcgtc gcaatcagta tgatcagtat 2821 ggcggtgcct acgattcgta ctccatgtac gagcagatgt cgcgcaatcc gcatgcctat 2881 gccgatatgt acgccaagtt ctacggccag atgatcaact cgatgacggc ggccgctgtc 2941 tcggcggctg cctcgaagtc cggagttcct ggcggcgcag cagcagcagc agcagcgatt 3001 cctggcttgg tgcccggcgc tgttccggtg agtgccgccc agttggtggc cgccgccgcc 3061 gccgcaagcg gaggcagtgt cagcgggagc agtgaagccg ccctgctgag ggagcgagaa 3121 aggtatacac acgcatacat aacccaagcc aatgaattcc atcgccaaca atacaaagag 3181 ctgatctacc agcaacaaca acaacaacaa caacagcaac atcacaggga ggatccgcta 3241 aactcgagtt ttaacattac ggaggataat gccagttttt acggatcacg aggaggatcc 3301 atctataacc aataccatcc atatccttcg ctctccagtg cccgctcgtt gagcaattta 3361 aacggcgatg gacgcaattc ccgatgcgga ccgtattacg ctggttccga gtgcggtctc 3421 gatatcagag ctgctgccga agcggcacca tcgacctacg gtggattggc caccgctgga 3481 acggtgacca ccaccgcggt ggctcgtccg ccgcgccgac gcacgcccct gcagttcaac 3541 cggccccatt tggtggcctc gtacgcgatg agtctgctgc tgaaggtgaa gcccaagtac 3601 gccggccgcg ggcgtttgcg caacgatgtg gaggtggcgc cgccgcgcat ccgcgacgga 3661 acgagcagcc tgctgcgcat gtatccgggt cccctgcagg gccgcaagct gcacaaggac 3721 aagatcatca gcttctgcaa ggaacagatc cgactgggac ccaccaaggg ctgcaccgtg 3781 ctctatgcca cccagaagag tccgcagggc agcgtggtca agtaccgtgc ctcgcatgcg 3841 ctcatgtggc acctgctcat actgctgctg cgccaaaatg ggtacattgc cgacactgat 3901 gtgggcgatc tgttgctgga gaaccagcag gagtatccct acgagcccag cgagtacgag 3961 gcggagaacg agccggatgt tgaggctgaa caggaggccg cagctcccgg ggagaagtca 4021 gtggaatcgg atttagacag cgaatcggca gcgggagcag ctgcagccac gccagaggaa 4081 acaccagccg gtggcgcaac caatggaggc gatgcgggag ctccacaatc gcctctgtcg 4141 gaacaggcgg ccacggacaa gttccgcagc tatgtgctgc gcggcaacgt cgaggaggcc 4201 ctccagtggg ccaccgacaa tggcctgtgg acgcacgcct ttttcctggc cctctacgag 4261 gatcgctacg ccctgacgga tgtcgcccag aagttcctca atcgcgcgat caaggccaac 4321 gatccgctgc agacgctcta ccagatgaag agctgccaga cgccggcgtg cgtcagccag 4381 ctgagggacg agcagtgggg cgactggcgg tcgcatctct ccattctggt gacgaacaag 4441 agccgccagc cgaagtacga tcgcagctcg gtggtggcgc tcggcgacac gctcttccag 4501 cggggcgaca tctatgcggc gcacttttgc tatctggtgg cccaggagga gttcggccgc 4561 tacgatagct cggccacaga gctaaccaca ttgaccgcca atgtgcccag actcatcctg 4621 ctgggctcct cgcactacaa gcacttcaat gagttcgcca gcaacgaggc catcatcatg 4681 acggagatct acgagtatgc tcgctcgctg ttcgatccca agttcagcat tgcccacttc 4741 cagcactaca agttcctgct ggccaccagg atcctcgact atggccagca cttccgctgc 4801 accaattact tggagcaaat cgccaggcac atcgagctga agccggagag ttacgacatt 4861 gattttatac agagggtctg cggtttggcc gaacgcctgc gctaccatga tcccatcctg 4921 atcaatcgcg tctcttttgc gagtccccca aatgccgcca gcaaggatag cgctgcgccc 4981 gaggagaagg cctggctgcg tcagctgcgc tccctggccg atgtgcagcc ccagcaggag 5041 caattgcaat tgcatcatca agtgcagcag cagcagcagg agcagaacga catcgatcag 5101 cagtttgccg aggtgaacaa gcagttcaga gagctgaaca tgcagtacga tggtggcaat 5161 ctggagagca cgctgcaaac gcaattgcct ccagtggagc agcagcagca gccagctcag 5221 tcagaggtgc ctccgccgca acaacaatac tatgaaccgc caccagcagc agcagcagca 5281 gcagcccaag tgccagcaga atcggatccc tatggacagc agcagggatc ctactacgat 5341 cccaatgcag gaatgcagca tcaatacgat cccaatgctg ggatacagca ccaatacgat 5401 ccgaataccg aggcccacca tcagtacgaa catggccaaa tagagcctgc aagtgaggcc 5461 taccaaccag cagcagatcc ttcagctgct cccgctggct atggctatga ttactggtcg 5521 ggcacccagc agccaccgta tggcgatgag cctgcgttaa aggatgaggc ggaggaggag 5581 gaggatgagc agcagatatt gcagcaggca cagcagcagc agcaattgcg cgtggccaag 5641 cagcaacagg agcaacatac tcgcaccaat ggcgccgcca acagcaacaa caatcgcttc 5701 aagtcgaatg ctttgaagca ggaaaaaggc agcagcatca ctgcattgcg aaaaaggcag 5761 gaggcttcga gaacagcaac tatagcggcg gcagcagcag caattgccca aataacacca 5821 gctaaagttg caacagcagc agcagcagca acgacgacgg cagcaacatc ggcaaaggca 5881 ttcaatttga atgatgtaag tagcttttcc cacatacata aacgacatca agctaccagc 5941 agcagcagca gcaacaacaa accagcaaca gcaacagcag cagcagcaac tttcacaaca 6001 gtagctgctc ttcctaatca attaccaagt tgtagaaagt ctaacagcca gaatagaacg 6061 tacttaggca cgccaaaaac gctaaccacg cccacacgtt tcattgccgc caaagcagcc 6121 acagttacag ccacgcccac agcgcccacc actttgacga ccacgtcgac gtctctaggt 6181 gcccggggat cgtccacgaa gcgggttaac tttaatctgc ccacaacaat agctgaatcg 6241 gaacaggaat tccagcatga gctgaacttt gaggaggcgg acgaggagca ggaagaggtg 6301 gaggaggacg aggaggagaa cgccttggct ctggcgcagg ccagaccaag tgggcatctg 6361 tcgcgcaaac cgcatattgt cttcaacggc acctatccca ttgacatgcc cctgacgcag 6421 agcaagagca gctcgtatga tccggaggcc aatgcagatc gcggcgactt gcagcgctat 6481 aggaactaca tgctccacga ctatgttatc gatgaggatg ccgagggcga ggagcaggcg 6541 caagaggagc aggaggagga cgagtatgcg gacgaggatc tattccccta tgcccacgac 6601 gcggatgaga gcttcgatga tggcgattac tatacgcacg agctgctcaa caagtatggg 6661 attataccga gcaaagaggg cgctcagaga acgccggcta ccgtggaggc agccaccatt 6721 accagcaact cggcctcgaa gccgcagcat gtgtggtcca tggaggagct gatagccaat 6781 ccggccatac cgctcaacta caagaaaatg tgcaccgagg tggagcagag tctcagtcga 6841 tttgagagct atctggatag caagaaggag caacagcaga tgccaccgcc tttggccgca 6901 gtgcgcacct tcgacatcga tgcacccacg cgccggggcc accggagcag cacttcatcc 6961 gcgaatgctg gcttggctct tagatctaag aagaaattgt aaacaaactc agagaaagaa 7021 atgtagaaaa gaaggagcca gtgcaacgct gcttttactt cctccttctt tgtttttttt 7081 tgtaagcttt ctgtacctgg acaagcgtct taactataag tagtcctaat gatgccccca 7141 agcaatctct gtaatcacta agccttatat accgataata attgtgagaa agagtttttt 7201 gactgcgcca gtttatttgc catgtttccg ttgttcattc gattcgaact aacccataac 7261 tactttgtta ctaacccaag cctaaacact ctgcctaaga tctatgacta ctacttatga 7321 ctaaaccgat tgcttctcgc cgaagactaa tccaatgcca tttcttaact ccaacttcaa 7381 tttcgccatc c