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LOCUS XM_070218754 7268 bp mRNA linear INV 09-DEC-2024 variant X4, mRNA. ACCESSION XM_070218754 VERSION XM_070218754.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7268 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7268 /gene="Sec16" /note="Secretory 16; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108062963" CDS 28..6879 /gene="Sec16" /codon_start=1 /product="uncharacterized protein Sec16 isoform X1" /protein_id="XP_070074855.1" /db_xref="GeneID:108062963" /translation="MLHNNAPWLPPHQQQQQQQQQAPQQHATPQQQQQQQQPHPAQQQ HQQHQQLYASQMFQQQQPNYWPEDQQQQQQSLNYNNYFAGQQQQLPLQQQQQQLPLQQ QQPQQPTQQQHNIQQQLYYPTHQQPQVPAPAEPALDSFDNNNSGGGGGGGGWGDWGDW NDNSNNNNSLSNEALLEPSGQLLEDSFNVQSSPGSWQAFATGNSVNNNVELPPPTDQQ AASLPQQPEVGQEPELDAIVPPQAFQNQPPTSLSAFAAPPFAVVAPPAPLAGGVAPPA PLAGVVAPPTDAAGIAPPAALPPSLTPAAGNPFKRSAGLNKRVNIMASPAGGAPSPPA PAVAPLAPPVAPPPGEAHGDGFNLLAAPPVEASPGAPIPAATASLYAQPAVDNQEVLS APNDERAQYLQTSHLSEQLGEGEADQDAGLLPPPGLSRLVLGQPELDSQQQRLVTGAT EQPALDVAQAAALHMQERQADGEDTSDDGGQQVRNIQTPPRRVVTGVETNAPSLREQV LDGENLEDREAIPPPALAELPPTLSVHHNIQPDEPELQLHHINQPPQAVTPQPQQPQQ PQLPLLQQQQPQQQEKKRAAAGGRRANASLDLESEDESDEFLQSERERDRERERRDLM DERQGRGRSHGHYTYDGETEDSVRGAAHHETKSLRETQHRRSNNHDSTRSRRHPAEPK AERERERERERDRERERHWRRRSNKYHSGGEDQERSYDHSRRYNNSNYDGESDNPEIN HLGEGELDGGGTEGRGGGGRSSKTGRSQRRSAAEEPSFDYYEPERDRDHDRQYSRRSN KQPSSADKSRSSGGRRSYENQGRSGRPEEGRRRHQDLRNWDGGYEEYRRKSSRNSDLE KERINGGNTSGGGGGGSGGGGSGSGKRRNQYDQYGGAYDSYSMYEQMSRNPHAYADMY AKFYGQMINSMTAAAVSAAASKSGVPGGAAAAAAAIPGLVPGAVPVSAAQLVAAAAAA SGGSVSGSSEAALLRERERYTHAYITQANEFHRQQYKELIYQQQQQQQQQQHHREDPL NSSFNITEDNASFYGSRGGSIYNQYHPYPSLSSARSLSNLNGDGRNSRCGPYYAGSEC GLDIRAAAEAAPSTYGGLATAGTVTTTAVARPPRRRTPLQFNRPHLVASYAMSLLLKV KPKYAGRGRLRNDVEVAPPRIRDGTSSLLRMYPGPLQGRKLHKDKIISFCKEQIRLGP TKGCTVLYATQKSPQGSVVKYRASHALMWHLLILLLRQNGYIADTDVGDLLLENQQEY PYEPSEYEAENEPDVEAEQEAAAPGEKSVESDLDSESAAGAAAATPEETPAGGATNGG DAGAPQSPLSEQAATDKFRSYVLRGNVEEALQWATDNGLWTHAFFLALYEDRYALTDV AQKFLNRAIKANDPLQTLYQMKSCQTPACVSQLRDEQWGDWRSHLSILVTNKSRQPKY DRSSVVALGDTLFQRGDIYAAHFCYLVAQEEFGRYDSSATELTTLTANVPRLILLGSS HYKHFNEFASNEAIIMTEIYEYARSLFDPKFSIAHFQHYKFLLATRILDYGQHFRCTN YLEQIARHIELKPESYDIDFIQRVCGLAERLRYHDPILINRVSFASPPNAASKDSAAP EEKAWLRQLRSLADVQPQQEQLQLHHQVQQQQQEQNDIDQQFAEVNKQFRELNMQYDG GNLESTLQTQLPPVEQQQQPAQSEVPPPQQQYYEPPPAAAAAAAQVPAESDPYGQQQG SYYDPNAGMQHQYDPNAGIQHQYDPNTEAHHQYEHGQIEPASEAYQPAADPSAAPAGY GYDYWSGTQQPPYGDEPALKDEAEEEEDEQQILQQAQQQQQLRVAKQQQEQHTRTNGA ANSNNNRFKSNALKQEKGSSITALRKRQEASRTATIAAAAAAIAQITPAKVATAAAAA TTTAATSAKAFNLNDVSSFSHIHKRHQATSSSSSNNKPATATAAAATFTTVAALPNQL PSCRKSNSQNRTYLGTPKTLTTPTRFIAAKAATVTATPTAPTTLTTTSTSLGARGSST KRVNFNLPTTIAESEQEFQHELNFEEADEEQEEVEEDEEENALALAQARPSGHLSRKP HIVFNGTYPIDMPLTQSKSSSYDPEANADRGDLQRYRNYMLHDYVIDEDAEGEEQAQE EQEEDEYADEDLFPYAHDADESFDDGDYYTHELLNKYGIIPSKEGAQRTPATVEAATI TSNSASKPQHVWSMEELIANPAIPLNYKKMCTEVEQSLSRFESYLDSKKEQQQMPPPL AAVRTFDIDAPTRRGHRSSTSSANAGLALRSKKKL" misc_feature <658..1392 /gene="Sec16" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature <661..>954 /gene="Sec16" /note="Kinetoplastid RNA Editing Protein A (KREPA); Region: KREPA; cl49620" /db_xref="CDD:483960" misc_feature 3559..4788 /gene="Sec16" /note="Ancestral coatomer element 1 (ACE1) of COPII coat complex assembly protein Sec16; Region: ACE1-Sec16-like; cd09233" /db_xref="CDD:187750" misc_feature order(4024..4029,4033..4038,4042..4056,4060..4062, 4066..4068,4096..4098,4102..4104,4108..4113,4117..4122, 4132..4134,4150..4152,4171..4173,4201..4203,4216..4218, 4225..4227,4309..4314) /gene="Sec16" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187750" misc_feature order(4555..4557,4621..4626,4630..4635,4642..4647, 4654..4656,4735..4740,4747..4752,4759..4761,4771..4773) /gene="Sec16" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:187750" ORIGIN 1 agagaacaaa aacaacaaca atccaacatg ttgcacaaca atgcgccctg gctgccaccg 61 catcagcagc agcagcagca gcagcaacag gccccgcagc aacatgcaac gccccaacag 121 cagcagcagc agcagcaacc tcatcctgca cagcagcagc atcagcagca tcagcagctc 181 tacgccagcc aaatgttcca gcaacagcag ccaaattact ggccggagga tcagcagcag 241 cagcagcagt cgctgaacta caataactac tttgcaggac agcagcagca actgccactg 301 cagcagcaac agcagcaact gccactgcag caacagcagc cacaacagcc tacgcagcag 361 caacataata tccagcagca actgtattat cccactcacc agcagccaca agtcccggct 421 ccagcggaac ccgctctgga ctcgtttgac aacaataata gcggcggagg aggaggagga 481 ggtggctggg gtgattgggg cgattggaac gacaatagca acaacaataa tagccttagc 541 aacgaggcct tgctggagcc atcggggcaa ctgctcgagg actccttcaa tgtccagtcc 601 tcgccaggca gttggcaagc ctttgccacc ggcaatagtg tcaataacaa tgtggagctg 661 ccgcctccaa cggatcagca ggcagcatca ttgcctcagc agccggaggt tggtcaggaa 721 cccgaactgg atgccattgt gccgccccag gctttccaaa accagccacc aacatcactt 781 tctgcgtttg ctgcaccacc atttgctgtg gtagctcctc cagcgcctct tgccggcggg 841 gtagctcctc cagcgcctct tgccggcgtg gtagcaccac caacggacgc cgctggcatt 901 gcaccaccgg ctgcactgcc gcccagcttg actccagcgg ctggcaatcc cttcaagcgc 961 tccgcgggcc tcaataagcg agtgaacata atggccagtc cggcgggcgg agctccttca 1021 ccaccagcac cggctgtagc gccattagct cctccagttg ccccgcctcc cggggaggcc 1081 catggcgatg gcttcaactt gctggcggca ccacctgttg aggcttcacc aggtgcccca 1141 attcctgcag caaccgcatc gctgtacgct cagccagcgg tggacaacca ggaggtgttg 1201 tccgccccta atgacgagcg ggcgcagtac ctgcagacga gtcacctgtc cgagcagctg 1261 ggcgagggcg aggcggatca ggatgcgggt ctgctgccgc caccgggctt gtcccgtctg 1321 gttctgggcc agccggagct ggactcgcag cagcagcgcc tggtcaccgg cgccacggag 1381 cagccggcgc tcgatgtcgc ccaggcggct gccctgcaca tgcaggagcg tcaggcggac 1441 ggcgaggaca cctcggacga cggcgggcag caagtgcgca atatacagac gccaccgcgt 1501 cgcgtcgtca cgggcgtgga gacgaacgca ccatcgttga gggagcaggt gctggatggt 1561 gagaatctgg aggatcgcga agccattccg ccaccagcgc tggccgaact tcccccgaca 1621 ttgtcggtac atcacaatat tcagcccgat gagccggagc tgcagctgca tcacatcaac 1681 caaccgccgc aggcagtcac cccgcaacca cagcaaccac agcaaccgca gctacctctt 1741 ctacagcagc agcagccgca acagcaggag aagaagcggg cggcggcggg gggacgtcgc 1801 gcgaatgcct cgctggatct ggagtccgag gacgagtcgg atgagttcct gcagagcgaa 1861 agggagcgcg atcgggagcg cgagcgccgg gatctgatgg acgagcggca gggccgcgga 1921 cgcagccatg gtcactacac ctacgatggc gaaacggagg actcggtacg cggtgctgcc 1981 caccacgaga ccaaatcgct gagggaaacg cagcacaggc ggagcaacaa tcacgactcg 2041 acgcgatcgc gtcgccatcc agcggaaccg aaggccgagc gggaaaggga aagggagcgg 2101 gaacgggata gggagcgtga gcggcactgg cggcgacgct cgaataagta tcacagtggc 2161 ggcgaggatc aggagcgttc gtacgatcat tcgcgtcgct acaacaacag caactacgac 2221 ggcgaatcgg ataatcccga gatcaatcat ctcggcgagg gagaactcga tggcggaggc 2281 actgagggaa gaggaggtgg tggccggagc agtaaaaccg gccgcagcca gcgacgcagc 2341 gccgccgagg agccgtcgtt cgactactac gaaccggaac gcgatcgtga tcacgatcgt 2401 caatactcca gacgctccaa caaacagcca tcgtcggccg acaaatcgcg atcgtcgggc 2461 ggacgacgga gctacgagaa tcagggacgc agtggccgcc cagaggaggg tcgccgacgt 2521 caccaggatc tgcggaactg ggacggtggc tacgaggagt accgccggaa gagctcgcgc 2581 aacagtgatc tcgagaagga gcgcatcaac ggaggcaaca ccagcggcgg cggcggcggt 2641 ggcagcggag gaggtggttc cggttccggc aagcgtcgca atcagtatga tcagtatggc 2701 ggtgcctacg attcgtactc catgtacgag cagatgtcgc gcaatccgca tgcctatgcc 2761 gatatgtacg ccaagttcta cggccagatg atcaactcga tgacggcggc cgctgtctcg 2821 gcggctgcct cgaagtccgg agttcctggc ggcgcagcag cagcagcagc agcgattcct 2881 ggcttggtgc ccggcgctgt tccggtgagt gccgcccagt tggtggccgc cgccgccgcc 2941 gcaagcggag gcagtgtcag cgggagcagt gaagccgccc tgctgaggga gcgagaaagg 3001 tatacacacg catacataac ccaagccaat gaattccatc gccaacaata caaagagctg 3061 atctaccagc aacaacaaca acaacaacaa cagcaacatc acagggagga tccgctaaac 3121 tcgagtttta acattacgga ggataatgcc agtttttacg gatcacgagg aggatccatc 3181 tataaccaat accatccata tccttcgctc tccagtgccc gctcgttgag caatttaaac 3241 ggcgatggac gcaattcccg atgcggaccg tattacgctg gttccgagtg cggtctcgat 3301 atcagagctg ctgccgaagc ggcaccatcg acctacggtg gattggccac cgctggaacg 3361 gtgaccacca ccgcggtggc tcgtccgccg cgccgacgca cgcccctgca gttcaaccgg 3421 ccccatttgg tggcctcgta cgcgatgagt ctgctgctga aggtgaagcc caagtacgcc 3481 ggccgcgggc gtttgcgcaa cgatgtggag gtggcgccgc cgcgcatccg cgacggaacg 3541 agcagcctgc tgcgcatgta tccgggtccc ctgcagggcc gcaagctgca caaggacaag 3601 atcatcagct tctgcaagga acagatccga ctgggaccca ccaagggctg caccgtgctc 3661 tatgccaccc agaagagtcc gcagggcagc gtggtcaagt accgtgcctc gcatgcgctc 3721 atgtggcacc tgctcatact gctgctgcgc caaaatgggt acattgccga cactgatgtg 3781 ggcgatctgt tgctggagaa ccagcaggag tatccctacg agcccagcga gtacgaggcg 3841 gagaacgagc cggatgttga ggctgaacag gaggccgcag ctcccgggga gaagtcagtg 3901 gaatcggatt tagacagcga atcggcagcg ggagcagctg cagccacgcc agaggaaaca 3961 ccagccggtg gcgcaaccaa tggaggcgat gcgggagctc cacaatcgcc tctgtcggaa 4021 caggcggcca cggacaagtt ccgcagctat gtgctgcgcg gcaacgtcga ggaggccctc 4081 cagtgggcca ccgacaatgg cctgtggacg cacgcctttt tcctggccct ctacgaggat 4141 cgctacgccc tgacggatgt cgcccagaag ttcctcaatc gcgcgatcaa ggccaacgat 4201 ccgctgcaga cgctctacca gatgaagagc tgccagacgc cggcgtgcgt cagccagctg 4261 agggacgagc agtggggcga ctggcggtcg catctctcca ttctggtgac gaacaagagc 4321 cgccagccga agtacgatcg cagctcggtg gtggcgctcg gcgacacgct cttccagcgg 4381 ggcgacatct atgcggcgca cttttgctat ctggtggccc aggaggagtt cggccgctac 4441 gatagctcgg ccacagagct aaccacattg accgccaatg tgcccagact catcctgctg 4501 ggctcctcgc actacaagca cttcaatgag ttcgccagca acgaggccat catcatgacg 4561 gagatctacg agtatgctcg ctcgctgttc gatcccaagt tcagcattgc ccacttccag 4621 cactacaagt tcctgctggc caccaggatc ctcgactatg gccagcactt ccgctgcacc 4681 aattacttgg agcaaatcgc caggcacatc gagctgaagc cggagagtta cgacattgat 4741 tttatacaga gggtctgcgg tttggccgaa cgcctgcgct accatgatcc catcctgatc 4801 aatcgcgtct cttttgcgag tcccccaaat gccgccagca aggatagcgc tgcgcccgag 4861 gagaaggcct ggctgcgtca gctgcgctcc ctggccgatg tgcagcccca gcaggagcaa 4921 ttgcaattgc atcatcaagt gcagcagcag cagcaggagc agaacgacat cgatcagcag 4981 tttgccgagg tgaacaagca gttcagagag ctgaacatgc agtacgatgg tggcaatctg 5041 gagagcacgc tgcaaacgca attgcctcca gtggagcagc agcagcagcc agctcagtca 5101 gaggtgcctc cgccgcaaca acaatactat gaaccgccac cagcagcagc agcagcagca 5161 gcccaagtgc cagcagaatc ggatccctat ggacagcagc agggatccta ctacgatccc 5221 aatgcaggaa tgcagcatca atacgatccc aatgctggga tacagcacca atacgatccg 5281 aataccgagg cccaccatca gtacgaacat ggccaaatag agcctgcaag tgaggcctac 5341 caaccagcag cagatccttc agctgctccc gctggctatg gctatgatta ctggtcgggc 5401 acccagcagc caccgtatgg cgatgagcct gcgttaaagg atgaggcgga ggaggaggag 5461 gatgagcagc agatattgca gcaggcacag cagcagcagc aattgcgcgt ggccaagcag 5521 caacaggagc aacatactcg caccaatggc gccgccaaca gcaacaacaa tcgcttcaag 5581 tcgaatgctt tgaagcagga aaaaggcagc agcatcactg cattgcgaaa aaggcaggag 5641 gcttcgagaa cagcaactat agcggcggca gcagcagcaa ttgcccaaat aacaccagct 5701 aaagttgcaa cagcagcagc agcagcaacg acgacggcag caacatcggc aaaggcattc 5761 aatttgaatg atgtaagtag cttttcccac atacataaac gacatcaagc taccagcagc 5821 agcagcagca acaacaaacc agcaacagca acagcagcag cagcaacttt cacaacagta 5881 gctgctcttc ctaatcaatt accaagttgt agaaagtcta acagccagaa tagaacgtac 5941 ttaggcacgc caaaaacgct aaccacgccc acacgtttca ttgccgccaa agcagccaca 6001 gttacagcca cgcccacagc gcccaccact ttgacgacca cgtcgacgtc tctaggtgcc 6061 cggggatcgt ccacgaagcg ggttaacttt aatctgccca caacaatagc tgaatcggaa 6121 caggaattcc agcatgagct gaactttgag gaggcggacg aggagcagga agaggtggag 6181 gaggacgagg aggagaacgc cttggctctg gcgcaggcca gaccaagtgg gcatctgtcg 6241 cgcaaaccgc atattgtctt caacggcacc tatcccattg acatgcccct gacgcagagc 6301 aagagcagct cgtatgatcc ggaggccaat gcagatcgcg gcgacttgca gcgctatagg 6361 aactacatgc tccacgacta tgttatcgat gaggatgccg agggcgagga gcaggcgcaa 6421 gaggagcagg aggaggacga gtatgcggac gaggatctat tcccctatgc ccacgacgcg 6481 gatgagagct tcgatgatgg cgattactat acgcacgagc tgctcaacaa gtatgggatt 6541 ataccgagca aagagggcgc tcagagaacg ccggctaccg tggaggcagc caccattacc 6601 agcaactcgg cctcgaagcc gcagcatgtg tggtccatgg aggagctgat agccaatccg 6661 gccataccgc tcaactacaa gaaaatgtgc accgaggtgg agcagagtct cagtcgattt 6721 gagagctatc tggatagcaa gaaggagcaa cagcagatgc caccgccttt ggccgcagtg 6781 cgcaccttcg acatcgatgc acccacgcgc cggggccacc ggagcagcac ttcatccgcg 6841 aatgctggct tggctcttag atctaagaag aaattgtaaa caaactcaga gaaagaaatg 6901 tagaaaagaa ggagccagtg caacgctgct tttacttcct ccttctttgt ttttttttgt 6961 aagctttctg tacctggaca agcgtcttaa ctataagtag tcctaatgat gcccccaagc 7021 aatctctgta atcactaagc cttatatacc gataataatt gtgagaaaga gttttttgac 7081 tgcgccagtt tatttgccat gtttccgttg ttcattcgat tcgaactaac ccataactac 7141 tttgttacta acccaagcct aaacactctg cctaagatct atgactacta cttatgacta 7201 aaccgattgc ttctcgccga agactaatcc aatgccattt cttaactcca acttcaattt 7261 cgccatcc