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LOCUS XM_070218746 2424 bp mRNA linear INV 09-DEC-2024 (LOC108056113), transcript variant X4, mRNA. ACCESSION XM_070218746 VERSION XM_070218746.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2424 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2424 /gene="LOC108056113" /note="autotransporter adhesin BpaC; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056113" CDS 66..1436 /gene="LOC108056113" /codon_start=1 /product="autotransporter adhesin BpaC isoform X3" /protein_id="XP_070074847.1" /db_xref="GeneID:108056113" /translation="MHALYCTLCSPYYETRANYNGLLKAQKSRVNELEAKVSAAKLTY NEALKNLEQISEDIHRQRQQRNNLLNYEAMLRQVDAQELDEEAPEEEEEEEEEPEEYL RMPDRLGGGHLLTDFEAVLTFPQKLAGGMHKSASTGAAGEDGGEGSGGGLGPLDLGLH APYEVKSSGSGSLASGSASVSTSVGANAPADNDIEQWTEIRLSHSDSTSSSYSNQSLL EQHGLESCSGGGGGLSLGRNHLEADAQSQHSTSSSDEPKRKVTCTTIFQDDSGSSGAP GQQMSRKQSLSQWLSRSNSFKGSGRRQSLDLLIDAGDKVKDVFSYGFQKVGRSLERRN SESEMDGCGGAEGEALLGGGTGEGDSGGGASASGGAGALSGAGDFFLFSRSSEPKELL SDEQVENLLLNHTVDENGAIIVEELKSPTTTTSMYHTHQQQQQQQQQQQKQHHQALNV VGALLF" misc_feature <96..263 /gene="LOC108056113" /note="SH3 domain-binding protein 5 (SH3BP5); Region: SH3BP5; pfam05276" /db_xref="CDD:461608" polyA_site 2424 /gene="LOC108056113" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cctagtttta aaatggaaga ttgcagctca agcgcaattt acttttgttg agatatttta 61 gcattatgca cgctttgtat tgtaccctct gttcgccgta ctacgagacg cgggcgaact 121 acaatggact gctgaaggcg cagaagtcgc gggtcaacga gctggaggcg aaggtcagtg 181 cggcgaagct gacgtacaac gaggcgctga agaatctcga gcagatctcc gaggatatcc 241 accggcagcg gcagcagcgc aacaatctgt tgaactacga ggccatgctg cgtcaggtgg 301 acgcccagga actcgatgaa gaggctccgg aagaggagga agaggaggag gaggaaccag 361 aggagtacct gcgcatgccg gatcgcctgg gcggcggcca tcttctcacc gactttgagg 421 cagtgctcac ctttccccag aagctggccg gcggcatgca caagtccgcc agcaccggtg 481 cagctggaga ggatggggga gagggttccg gaggaggcct gggaccgctg gacctgggcc 541 tgcatgctcc ctacgaggtg aagtcctcgg gcagcggttc tttggcctcg ggatccgcct 601 ccgtttcgac ttcagtgggt gctaatgcgc cggcggacaa cgatatcgaa cagtggacgg 661 agattcgact gtcgcattcg gatagcacca gttccagcta ctcgaatcag tcgctcctcg 721 agcagcacgg cctggagagc tgctcgggcg gcggcggcgg cttatctctg ggccgaaacc 781 atctggaagc ggacgcccag tcgcagcact cgacctcgtc gtccgatgag cccaaacgca 841 aggtcacctg cacgacgata ttccaggatg acagtggatc atctggtgct cctggccagc 901 agatgagccg caagcagagc ctcagccagt ggctgtcgcg ttcgaacagc ttcaagggca 961 gcggacgaag gcagagcctc gatctgctga tcgatgccgg cgacaaggtg aaggatgtgt 1021 ttagctatgg gttccagaag gtgggacgca gcctggagcg gcgcaacagc gagtcggaga 1081 tggatggatg cggcggagcc gagggcgagg cgctgctggg aggcggaaca ggagaaggag 1141 actccggtgg aggagcaagt gcctccggtg gagctggtgc cttgtccggt gccggtgact 1201 ttttcctctt cagcagatct tcagagccta aagagctact gtccgatgag caggttgaga 1261 atttactatt aaatcacacg gtggatgaga acggtgccat tatagtggaa gaactcaaat 1321 cgccaacaac aaccacaagc atgtatcaca cacaccaaca acaacaacag cagcagcaac 1381 aacaacaaaa gcaacaccat caggcactca atgtggttgg agccctgctg ttttgaaccg 1441 acagcgaaat accctacact tagattaaca ccaaaacgcc ctcactttca ctcacctcca 1501 tataattgca gtgatgggaa aagtattatt ttttattaaa atttgaaata ttgttaaagc 1561 tagcatgata tgtataatcc atacattatc gaatttcgaa actatacggt gaaaaagaaa 1621 aacgtaatgt cgttgtttta gaaattgaag aaagggattt tctttattat tttcagaaaa 1681 aatcatttcg atttaatgat atttttttca atatttttcc aagctctaag gaatatccaa 1741 aattagaaaa caattcattt attacgtttt tcgttttcgt ttccccatca ctgcagctat 1801 attaatatga ataatggcaa aatttttact ctatgagtat tcgggcatcg atcttaactc 1861 taaaaatcca attagtcaaa aacgtagcgt acatatcatt caagacatca atccagacgg 1921 atccgatcag cccgcaggaa tcttttaaat ccacattaac gcactcaggc gcacgtgtgg 1981 caaactatgt tctaatccta aataaaatgt gcaataattt agtttactta gaggcatata 2041 catacataaa taagaaagtt acattttatg ctgtttacaa aaagcaaata actaaatgct 2101 agtcaacaaa cgaaatcagt ttaatagttt ttagtgtgta tgagctaaac attcggcaaa 2161 acaaagattt acaaaaaccc acaaaataca taaaattgta caaataatgg taaatgtggc 2221 gtgggcggaa cgagaaggga gggggagtgg cgacaacaaa acgttagtga taatagttta 2281 tggagaagtt ttgaaatatt gcgcggtcag ctaattgtcc cagaaccctc cactcttttt 2341 ccgcatgcgc cactgagtgt taaatacttg catacatgta ttaatacctg catacaacaa 2401 atatatggag tgtattatac aaaa