Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Drosophila takahashii uncharacterized PE-PGRS family


LOCUS       XM_070218730            3014 bp    mRNA    linear   INV 09-DEC-2024
            protein PE_PGRS46 (LOC108065723), transcript variant X2, mRNA.
ACCESSION   XM_070218730
VERSION     XM_070218730.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3014
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..3014
                     /gene="LOC108065723"
                     /note="uncharacterized PE-PGRS family protein PE_PGRS46;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:108065723"
     CDS             342..3014
                     /gene="LOC108065723"
                     /codon_start=1
                     /product="uncharacterized PE-PGRS family protein
                     PE_PGRS46"
                     /protein_id="XP_070074831.1"
                     /db_xref="GeneID:108065723"
                     /translation="MRHAFVGLIVCWLAVCQPQAEAQFGGFGFQPQFQPQYQPQVYRQ
                     PQVYRQPQAYQAQPQPLVYYQQPQQVYQQPRQRQGSVSKANTNAYERQVDFGNNLEYT
                     QGLSNSRAVTKQNGQRVVTKSQAQTRDVDLGGLQLGNTLTRTRTNANGQVSQGIADQF
                     RIGNVGLGASLSPQNLQNGFGLQRGADGDLRLGLGLLNLDLDRNVANSNTLSQAQVNA
                     QGKGAKAGSSSNSQSNTQQYGGVTVTDTRSNSNAFGKTRRGQTSATTGGFGGSAATNG
                     QTFGAAPFQRVVRQNRPRPKRRAQFVPFGYPGGGFGPAPGPFGLGPLDRPRRQFGGGF
                     GGFGGFGGGPQFGGGPQFGGGGFGGPEFYEQPQQQQQQHKKKGNKNQAHGNANAQGGP
                     GFNQQASTNNHASPGNTGSSSISSNLAQDGSSGQVSSANTNTHQGQTANGGYESDQNS
                     QSQALNFRPGEQQASSANANTQHTQQGDRDAYSSNSGSTSTNNNQFGSATNTANTNSQ
                     VVKEGNRQDATSDANSQSIFQGNNGQGDASAQTNAQTSSQRGPNGFVSNSASSSATAT
                     AQNGQSANANANANAGGGAGGAGAGANAGGFGGGAGSDANASGGFGGNGGGAGANAGG
                     FGGFGGGGGANANSNAFGGFGGFGFYGLRHRAQQQIRLQRWQPRPQNGTSSRSSSTSS
                     TSSSINDNFEYVYFNHSSSSRLEDLQPGSSGQDRDGNGMGRVPLNTSVDVDAFGPYDR
                     TQRQGRTFGLIYDWISGLFNSCVSPCTLEAFQKQTCCETYVVDPSYPLPPPPPPPPPP
                     PQSCCAPVRPPYPSPPRPLPPPPPPPPMAYPYPPIYPNKNTPVMVVATPINCCTVCTF
                     TYYGPPPCGRLYNNNTSSGDGKKVIYVPPPYYGR"
ORIGIN      
        1 gatcaccata catctatatg gagtgaatag cttttttcag tgtagccaga gaggaagagt
       61 tgtagagaag aaccggcgga acaacaaact gaacagcgac acggcgaaaa aaaaacacgg
      121 cggagaaaca ataaaagtcg gccagcggcc aaaaacgcgc tcattgcgtg cgctgttttc
      181 gcaacggcaa cggaaaatta gccacccagt tgaggtgcga gcgagatagc cagctagcga
      241 gtgtagtacg gcaacggaat acggattttc cgagtgacgg gaaaagtacg gaaaagcaga
      301 ggacaggagc acggaacaca gagtgcggat acgaagccag gatgcgacac gcatttgttg
      361 gattaattgt gtgctggctg gcagtttgtc aaccgcaagc tgaggcgcag ttcggaggct
      421 ttgggttcca gccgcagttc cagccgcagt accagccgca ggtatatcgg caaccgcagg
      481 tgtaccgcca accgcaggct taccaagctc aaccacaacc tctggtttat taccaacagc
      541 cccagcaggt ctaccagcag ccccgccagc gacagggatc cgtctcgaag gccaacacga
      601 atgcctacga gcggcaggtg gacttcggga acaatctgga gtacacgcag ggcctctcga
      661 actcgcgggc ggtgaccaag cagaatgggc agcgcgtggt gaccaagagc caggcgcaga
      721 cgagggacgt ggacctgggc ggcctgcagc tgggcaacac gctgacccgc acgcggacca
      781 atgccaacgg gcaggtgtcc cagggcatcg ccgatcagtt caggatcgga aatgtcggac
      841 tgggcgcctc cctgtcgccg cagaacctgc agaacggctt cggcctgcag cgcggcgccg
      901 acggtgacct ccgcttgggc ctgggcctcc tcaatctcga cctggaccgc aatgtggcca
      961 actcgaacac gctgtcgcag gcccaggtga atgcccaggg caagggcgcc aaggcgggat
     1021 cgagcagcaa ttcgcagtcg aatacccagc agtacggcgg agtcaccgtt acggatacgc
     1081 gctccaactc gaatgccttt ggcaagacgc gcaggggcca gacctcggcc accacgggag
     1141 gattcggagg cagtgcggcc accaatggcc agaccttcgg cgccgctccc ttccagcggg
     1201 tggtgcgcca gaacaggccg cggcccaaga ggcgggccca gttcgtgccc ttcggctatc
     1261 cgggaggcgg cttcggtccc gcccccggac ccttcggcct gggacccttg gacaggccaa
     1321 ggaggcagtt cggcggtggc tttggcggct tcggtggctt cggaggaggc ccgcaattcg
     1381 ggggaggacc acaattcgga ggcggtggct tcggaggacc cgagttctac gagcagcccc
     1441 agcagcagca gcagcagcac aagaagaagg gcaacaagaa ccaggcgcat ggcaatgcga
     1501 atgcccaggg cggaccgggc ttcaaccagc aggcgtcgac gaacaaccac gcgagtcccg
     1561 gcaacacggg cagcagctcg atcagctcca atttggccca ggacggcagc agcgggcagg
     1621 tgagctcggc caacacgaac acccaccagg ggcagacggc caacgggggc tacgaaagtg
     1681 atcagaactc gcagagccag gccctcaact tccggcccgg cgagcagcag gcctccagtg
     1741 cgaatgccaa cacccagcac acccagcagg gcgaccggga tgcctactcc tcgaacagcg
     1801 gctccacctc cacgaacaac aaccagtttg gctccgccac caacaccgcg aacaccaatt
     1861 cgcaggtggt caaggagggc aatcgccagg atgcgaccag tgatgccaac agccagagca
     1921 tcttccaggg caacaacggc cagggagacg cctccgccca gacgaacgcc cagacgagca
     1981 gccagcgggg tcccaatgga ttcgtgagca actcggcctc cagcagcgcc accgccaccg
     2041 cccagaacgg ccagtcggcc aatgcgaacg cgaatgcgaa tgcgggcggt ggtgccggtg
     2101 gtgcgggagc cggcgcaaat gccggtggct tcggcggtgg tgcaggttcc gatgccaatg
     2161 catccggtgg attcggaggc aacggtggtg gtgccggggc aaatgccggc ggcttcggtg
     2221 gcttcggcgg cggcggcggc gccaatgcca atagcaacgc ctttggcggc ttcggcggct
     2281 tcggcttcta cggacttcgc catcgagccc agcaacagat tcgcttgcag cgctggcagc
     2341 cacgccccca aaacggcact tcatcccgga gctcgtctac ctcatccacc tcctcctcga
     2401 taaacgataa ctttgagtac gtgtacttca accactcgtc ttcgtcacgc cttgaagatc
     2461 tgcagcccgg gagttctggc caggatcggg atgggaatgg aatgggtagg gtgccgctga
     2521 acacctcggt ggatgtggat gccttcgggc cgtacgatag aacccagcgt caggggcgga
     2581 ccttcggttt gatctacgac tggatcagtg gcctcttcaa ctcctgcgtt tcgccctgca
     2641 ccctggaggc cttccagaag caaacctgct gcgaaacgta tgtggtggat ccctcgtacc
     2701 cccttcctcc tcctcctccg ccaccccctc cgccaccaca aagctgctgt gctcctgtga
     2761 gaccacccta cccctctcca cccagaccac tgccccctcc tcctccaccg ccacccatgg
     2821 cctaccccta tccacccatt tatcccaata agaatacgcc cgtgatggtg gtggccacgc
     2881 ccatcaactg ctgcaccgtg tgcacattca cctactacgg acctccgccc tgtgggcggc
     2941 tctacaacaa caacaccagc agcggggatg gcaagaaggt catctatgtg ccaccaccct
     3001 attacggccg ctaa