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LOCUS XM_070218717 2800 bp mRNA linear INV 09-DEC-2024 (LOC108065687), transcript variant X2, mRNA. ACCESSION XM_070218717 VERSION XM_070218717.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2800 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2800 /gene="LOC108065687" /note="protein bric-a-brac 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108065687" CDS 185..2239 /gene="LOC108065687" /codon_start=1 /product="protein bric-a-brac 1 isoform X1" /protein_id="XP_070074818.1" /db_xref="GeneID:108065687" /translation="MLPQQYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLACEGQLIRA HRVVLCACSTFFDAVLSNYASERDPIIIMKDVTFAEVKCLIEFMYKGEINVEHASLPS LLKTADDLKIKGLAEVTWRDDEDGPPPPMAAAEFHSPPRSLAESYAQDLILQHQQQQQ PPAGPPLHLHSSAILDRDREQRDRDRERLSPGMESVLGRMPVMTPLPGAAGSAGVGAI SGATALEGVAPVEHFLGPKRKRGRPPLDDAYDVFNVRKLAQYAANLEPAQRAYLETAR HFAEEPPLAAHAASMASPPAACPPKQRQRLRHQQQQQQQQQQQQLLQSETSDQEPSVA GQDWSSSEPNGRCTPKNPGDGDDNKQETEAGEESQPDVLTSTSSSAKKLEKISERRER HGKLRHARRLYEKSGGGGGAGGGEEVESPPKEEPDELPQPLEEIENEHLVANRAESPR PTVVIPASFACKYEGGVAAGGGGGSSGSSSYLINEHGMLMAHEFAPNVASAAATAAVA VAAAAAAVANASAGSGSQDPGGSGGAGSSADYPDIKLEDYDAAELRLTNEELSQWQDV IKMDDYLAKGRRPQFWEEPFTKRVLDAIKNKRLEMKKAARILGVSYGTLYGRYREVYG CLKHPYSGTAFRNSGSTSASQLGVQPRFDLGFRNGGVLPAQLELGKLKKDLSELWTRP QI" misc_feature 272..526 /gene="LOC108065687" /note="BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Drosophila melanogaster proteins bric-a-brac 1 (BAB1), bric-a-brac 2 (BAB2), modifier of mdg4 (doom), and similar proteins; Region: BTB_POZ_BAB-like; cd18315" /db_xref="CDD:349624" misc_feature 1949..2056 /gene="LOC108065687" /note="helix-turn-helix, Psq domain; Region: HTH_psq; pfam05225" /db_xref="CDD:283007" polyA_site 2800 /gene="LOC108065687" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtactttgcg tttaagtata ttgacatatt ggtttgtgtg ggatgggaga tgtgagatgg 61 ggggaaaatt gtgtttttat taagcgtcaa ctcattttgt acatgcaagg agaggacctc 121 cagtagaatt actagaacca ccagaggcac caccatcagg ggcagcagca ggcgcggcac 181 caccatgctg ccgcagcagt actgcctgag gtggaagtac caccatagca atctgcagac 241 catgttctcc cagctcctgg atcgcggctg cttctgcgac gtgaccttgg cctgcgaggg 301 ccagctcatc cgcgcccacc gcgtcgtcct gtgcgcctgc agcaccttct tcgacgccgt 361 gctctccaac tatgccagcg aacgcgatcc gatcatcatc atgaaggacg tgaccttcgc 421 ggaggtcaag tgcctcatcg agttcatgta caagggcgaa attaatgtgg agcatgccag 481 cctcccttca ctgctaaaga ccgcggacga cctgaagatc aagggtctgg ccgaggtcac 541 ctggcgcgac gacgaggacg gtccgccgcc accgatggcc gccgcggagt tccattcgcc 601 gccacgcagt ctggcggaga gctacgccca ggacctaatc ctccagcacc aacagcagca 661 gcagcccccg gctggtccgc ccttgcacct gcacagctct gccattttgg acagggatcg 721 tgagcaacgg gatcgcgatc gggagcgcct gtccccggga atggagagtg tgctgggtcg 781 catgcccgtg atgacgccgc tgccgggtgc cgccggctca gccggagtgg gtgcgatatc 841 cggggccaca gccctcgagg gcgtcgcacc cgtcgagcac tttttgggcc ccaaacgcaa 901 gcggggtcgt ccgccactag acgacgcata cgatgtgttc aacgtacgca agctggccca 961 gtatgccgcc aacctggagc ccgcccagcg tgcctatttg gagacggcgc gtcacttcgc 1021 cgaggagcct ccgctggcgg cccatgccgc ctcgatggcc tccccgcccg ccgcctgccc 1081 gcccaaacag cgccagcgcc tacgtcacca gcagcagcag cagcaacagc agcagcagca 1141 gcagctcctc cagtcggaaa ccagtgacca ggagccatcg gttgctggcc aggattggtc 1201 cagttcggag cccaatggca gatgcacgcc caagaaccct ggcgatggcg atgacaacaa 1261 gcaggaaacg gaagccggcg aggaatcgca accggatgtg ctgaccagca caagcagttc 1321 cgccaagaag ctggagaaga tcagcgagcg gcgcgaacgt catggcaagc tgcgtcatgc 1381 ccgacggctg tacgagaagt ccggaggagg aggaggggca ggaggagggg aggaggttga 1441 gtcgccgccg aaggaggagc ccgacgagct gccgcagccg ctggaggaga ttgagaatga 1501 gcatctggtg gcgaacaggg cggaatcgcc acgtcccacg gtcgtgattc cggccagttt 1561 tgcctgcaaa tacgaggggg gcgtggcagc cggaggaggc ggtggatcga gtggctcttc 1621 ctcctatttg atcaacgaac acggcatgct gatggcccac gaatttgcac cgaatgtggc 1681 cagtgccgcg gccaccgctg ccgttgccgt tgcagcagcc gccgccgccg tggcaaatgc 1741 ctcagccgga agtggaagcc aggatccagg cggcagtggc ggtgccggct cctccgccga 1801 ctatcccgac atcaagctgg aggactacga tgccgccgaa ctgcgcctga ccaacgagga 1861 gctgtcgcag tggcaggacg tcatcaagat ggacgactat ctggccaagg ggcggcgtcc 1921 acagttctgg gaggaaccct ttaccaagcg tgtgctggat gccattaaaa acaaaagact 1981 cgagatgaaa aaggccgcca gaattctggg cgtttcctac ggcactcttt atgggcgtta 2041 ccgcgaggta tatggctgcc tgaagcatcc ttacagtggc accgccttcc gtaactcggg 2101 atccacctcg gccagccagt tgggagttca gccgcgcttc gacttgggat tccgcaacgg 2161 aggagtcctg ccagctcagc tggagctggg caagctgaag aaggatctga gcgagctatg 2221 gacacgtccg cagatttgag gaccaaccaa tgccaccacc accaccacaa ctatgaagaa 2281 actgcagaaa aatctcaaac gacgccacaa gctgatctag gatcacaagg ataaaagaca 2341 gctagacgag gctagtttta gatcccgaag aagaaaaaac aaacactttc ctgaatcgat 2401 tcccacttta atttgttgca cccctctcgg gtcgcaacta taactgatct tctacacatt 2461 taggatctta ttattacata atataatata ctatataaat acatgtctat atatatacat 2521 ttaaagccga cgcacgcgtg gattagttaa ttgaaataca tattataaac acacacacac 2581 gggcacgtgt tgttctagag ataaatacat ttctcttggt agtgaaatta aaacgaaaat 2641 aaactatgga atctagttaa tcaataacat acaacaaaag tgaagtgaat tttttgataa 2701 gctaaaacga acacaaacaa tatgtattac atacaaaaag aaatatgttt aaaacgaaat 2761 aaaatattat ctatgaaaaa tatgtttaaa acgaaataaa