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LOCUS XM_070218705 2319 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_070218705 VERSION XM_070218705.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2319 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2319 /gene="mh" /note="maternal haploid; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054088" CDS 116..2266 /gene="mh" /codon_start=1 /product="DNA-dependent metalloprotease SPRTN isoform X2" /protein_id="XP_070074806.1" /db_xref="GeneID:108054088" /translation="MAEGDDYLFALMLHAQLNEEEEPRNSPPSGENTNKESDHQLALK IQALLNASDDEEAAAQQAAPGDLDSSFQFVYPSNKSQNHSKSQSTMSNNKKTTSKNRG GAGKEPPYALQSTYDDYLNQTQNLVHPQWELVDPTPDIFAMFLRFDDKFFQKRLGAVA LEWSKKMYSCAGICYQRGNRYVKEVTIRLSEPLLKLRPRKDLVETLLHEMIHAYCFVL NIREGNGGHGPMFKRIMETINKVAGTNITVYHSFHDEVNAYKTHIWRCTGICQNRTPF QGYVKRTSNRAPGPNDQWWAKHQRECGGTFMKLGEPAKPPKPAKKEKKLPAEASSMRN WLDRPPAAKKPDNLEGKGPPAKKPATGEALLDNMEGRGPPAWFMERIKGSSKSRGANI MSFGDLSKSGEAGRGSSSSSQMSGAGYSVGGASEVIDITGDESPDPSQLRKIRLERFE GGKSTNQKRRRGSEDEGITTWESYDEDVMVRDVPTPMINLLNSDDSDEEQEKPKIRAR NTMSSQERTQSIKREVMEDEAIYSEDEILMIDDEYDENDDSLTAATELADQSILDDLF GQDTLLEEFQLENSVQPSGSRGYSSNVDNDIVSCPICFEKMKRTELGNHFEGCTITVR VEPPSFNKKKPEESKASRKSSSSSKQTLRNCGYTENEIAKLNLSSSSSEDELTPRQRR QRNLFKQTVGCPKCGQELMGHQLEAHRSICKKRR" misc_feature 527..1039 /gene="mh" /note="SprT homologues; Region: SprT; smart00731" /db_xref="CDD:214794" misc_feature 1904..1972 /gene="mh" /note="Rad18-like CCHC zinc finger; Region: ZnF_Rad18; smart00734" /db_xref="CDD:128973" ORIGIN 1 atcgaaacat cgattcccac ctctaagcgc gaagaaattg gtttcttttg attttcacct 61 cgatctgcgt cttatttctg gccgagatta ggctaggcat catccattat ccacgatggc 121 cgaaggcgac gactacctgt ttgccctgat gctgcacgcc cagctgaacg aggaggagga 181 gcccagaaac tctccaccaa gtggggagaa cactaacaaa gaatcggacc accagctggc 241 cctcaagata caggcgctgc tcaacgcatc cgacgacgag gaggcagcgg cgcagcaggc 301 ggcgcctggc gatttagaca gcagctttca gtttgtctat ccctcgaaca aaagtcaaaa 361 tcattccaaa tcgcagagca caatgagcaa caataagaaa actacgagca aaaatcgcgg 421 tggagcgggc aaggagccac catacgcttt gcagtccacc tacgatgatt atctcaatca 481 gacgcagaat ctggtgcatc cgcagtggga gctggtcgat cccacgcccg atatctttgc 541 catgttcctg cgcttcgacg ataagttctt ccagaagcgt ctgggcgccg tggccctcga 601 atggagcaag aagatgtact cctgcgcggg aatttgctac cagcggggca atcgttatgt 661 caaggaggtg accattcggc tgagcgagcc gctgcttaag ttgcgtccgc gcaaggatct 721 cgtggagacg ctgctgcacg agatgatcca cgcctattgc tttgtgctca acattcgcga 781 gggcaacggc ggccatggtc ccatgttcaa gcgcatcatg gagacgatca acaaggtggc 841 tgggaccaat atcaccgtct atcactcctt ccacgacgag gtgaacgctt ataagacgca 901 catttggcgc tgcacgggca tctgtcagaa tcgcacgccc tttcagggct atgtaaagcg 961 cacgagcaac cgggcacctg gtccaaatga ccagtggtgg gcgaagcatc agcgggagtg 1021 cggcggcacc ttcatgaagc tgggggagcc tgcaaaacca cccaaacccg ccaagaagga 1081 gaagaagctg cccgctgagg cttcctccat gcgcaattgg ctggataggc caccggcagc 1141 caagaagccg gacaatctgg agggcaaagg gccgccagct aagaagccag cgactggcga 1201 ggctttgctg gacaatatgg agggcagagg gccaccagcc tggtttatgg aacgcattaa 1261 gggctcctcc aagtcgcgtg gtgccaacat catgagcttc ggcgatctca gcaagagtgg 1321 cgaagcaggc agaggatcct cctcctcctc ccagatgagc ggagcaggct acagcgtggg 1381 tggcgccagc gaggtgatcg atataaccgg cgatgagagt cccgatccct cgcaactacg 1441 caagattcgc ctggagcgct tcgaaggagg taaatccacc aaccaaaagc gacgtcgcgg 1501 ctccgaggat gagggaataa ccacctggga gtcgtacgac gaggatgtga tggtcaggga 1561 cgtgcccacg cccatgatta acctgctgaa tagcgatgat agcgatgagg agcaggagaa 1621 gccaaagatc agggccagaa acaccatgag cagccaggag cgcacgcaga gcatcaagcg 1681 cgaggtgatg gaggacgagg ccatttactc cgaggacgag atcctcatga tcgacgacga 1741 gtacgatgaa aatgacgata gcctcacggc ggccaccgag ctggccgatc agtcgatttt 1801 agatgatctc tttggccagg acacgctgct cgaggagttc cagctggaga actccgtgca 1861 gccgagcgga tcgcgcggat actcgagcaa tgtggacaac gacattgtct cctgtcccat 1921 ttgcttcgag aagatgaagc gcaccgagtt gggcaatcat ttcgagggct gcaccatcac 1981 cgtgcgtgtg gagccgccgt cgtttaataa gaagaagcca gaggagtcta aagcctccag 2041 gaagagctcc tcctcctcca agcaaaccct gcgcaactgc ggctacaccg aaaatgagat 2101 agccaaactg aatttgagct cctcctccag cgaggatgag ctaacgccac gccagcgccg 2161 ccagcgcaat ctcttcaagc agaccgtcgg ctgccccaag tgcggccagg agctgatggg 2221 ccaccagctg gaggcgcacc gctccatttg caagaagagg cgttagaaag ttaaatttat 2281 cattctttgt tttctaactg attaaataat gttacaaaa