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LOCUS XM_070218704 2321 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_070218704 VERSION XM_070218704.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2321 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2321 /gene="mh" /note="maternal haploid; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054088" CDS 115..2268 /gene="mh" /codon_start=1 /product="DNA-dependent metalloprotease SPRTN isoform X1" /protein_id="XP_070074805.1" /db_xref="GeneID:108054088" /translation="MAEGDDYLFALMLHAQLNEEEEPRNSPPSGENTNKESDHQLALK IQALLNASDDEEAAAQQAAPGDLDSSFQFVYPSNKSQNHSKSKQSTMSNNKKTTSKNR GGAGKEPPYALQSTYDDYLNQTQNLVHPQWELVDPTPDIFAMFLRFDDKFFQKRLGAV ALEWSKKMYSCAGICYQRGNRYVKEVTIRLSEPLLKLRPRKDLVETLLHEMIHAYCFV LNIREGNGGHGPMFKRIMETINKVAGTNITVYHSFHDEVNAYKTHIWRCTGICQNRTP FQGYVKRTSNRAPGPNDQWWAKHQRECGGTFMKLGEPAKPPKPAKKEKKLPAEASSMR NWLDRPPAAKKPDNLEGKGPPAKKPATGEALLDNMEGRGPPAWFMERIKGSSKSRGAN IMSFGDLSKSGEAGRGSSSSSQMSGAGYSVGGASEVIDITGDESPDPSQLRKIRLERF EGGKSTNQKRRRGSEDEGITTWESYDEDVMVRDVPTPMINLLNSDDSDEEQEKPKIRA RNTMSSQERTQSIKREVMEDEAIYSEDEILMIDDEYDENDDSLTAATELADQSILDDL FGQDTLLEEFQLENSVQPSGSRGYSSNVDNDIVSCPICFEKMKRTELGNHFEGCTITV RVEPPSFNKKKPEESKASRKSSSSSKQTLRNCGYTENEIAKLNLSSSSSEDELTPRQR RQRNLFKQTVGCPKCGQELMGHQLEAHRSICKKRR" misc_feature 529..1041 /gene="mh" /note="SprT homologues; Region: SprT; smart00731" /db_xref="CDD:214794" misc_feature 1906..1974 /gene="mh" /note="Rad18-like CCHC zinc finger; Region: ZnF_Rad18; smart00734" /db_xref="CDD:128973" ORIGIN 1 tcgaaacatc gattcccacc tctaagcgcg aagaaattgg tttcttttga ttttcacctc 61 gatctgcgtc ttatttctgg ccgagattag gctaggcatc atccattatc cacgatggcc 121 gaaggcgacg actacctgtt tgccctgatg ctgcacgccc agctgaacga ggaggaggag 181 cccagaaact ctccaccaag tggggagaac actaacaaag aatcggacca ccagctggcc 241 ctcaagatac aggcgctgct caacgcatcc gacgacgagg aggcagcggc gcagcaggcg 301 gcgcctggcg atttagacag cagctttcag tttgtctatc cctcgaacaa aagtcaaaat 361 cattccaaat cgaagcagag cacaatgagc aacaataaga aaactacgag caaaaatcgc 421 ggtggagcgg gcaaggagcc accatacgct ttgcagtcca cctacgatga ttatctcaat 481 cagacgcaga atctggtgca tccgcagtgg gagctggtcg atcccacgcc cgatatcttt 541 gccatgttcc tgcgcttcga cgataagttc ttccagaagc gtctgggcgc cgtggccctc 601 gaatggagca agaagatgta ctcctgcgcg ggaatttgct accagcgggg caatcgttat 661 gtcaaggagg tgaccattcg gctgagcgag ccgctgctta agttgcgtcc gcgcaaggat 721 ctcgtggaga cgctgctgca cgagatgatc cacgcctatt gctttgtgct caacattcgc 781 gagggcaacg gcggccatgg tcccatgttc aagcgcatca tggagacgat caacaaggtg 841 gctgggacca atatcaccgt ctatcactcc ttccacgacg aggtgaacgc ttataagacg 901 cacatttggc gctgcacggg catctgtcag aatcgcacgc cctttcaggg ctatgtaaag 961 cgcacgagca accgggcacc tggtccaaat gaccagtggt gggcgaagca tcagcgggag 1021 tgcggcggca ccttcatgaa gctgggggag cctgcaaaac cacccaaacc cgccaagaag 1081 gagaagaagc tgcccgctga ggcttcctcc atgcgcaatt ggctggatag gccaccggca 1141 gccaagaagc cggacaatct ggagggcaaa gggccgccag ctaagaagcc agcgactggc 1201 gaggctttgc tggacaatat ggagggcaga gggccaccag cctggtttat ggaacgcatt 1261 aagggctcct ccaagtcgcg tggtgccaac atcatgagct tcggcgatct cagcaagagt 1321 ggcgaagcag gcagaggatc ctcctcctcc tcccagatga gcggagcagg ctacagcgtg 1381 ggtggcgcca gcgaggtgat cgatataacc ggcgatgaga gtcccgatcc ctcgcaacta 1441 cgcaagattc gcctggagcg cttcgaagga ggtaaatcca ccaaccaaaa gcgacgtcgc 1501 ggctccgagg atgagggaat aaccacctgg gagtcgtacg acgaggatgt gatggtcagg 1561 gacgtgccca cgcccatgat taacctgctg aatagcgatg atagcgatga ggagcaggag 1621 aagccaaaga tcagggccag aaacaccatg agcagccagg agcgcacgca gagcatcaag 1681 cgcgaggtga tggaggacga ggccatttac tccgaggacg agatcctcat gatcgacgac 1741 gagtacgatg aaaatgacga tagcctcacg gcggccaccg agctggccga tcagtcgatt 1801 ttagatgatc tctttggcca ggacacgctg ctcgaggagt tccagctgga gaactccgtg 1861 cagccgagcg gatcgcgcgg atactcgagc aatgtggaca acgacattgt ctcctgtccc 1921 atttgcttcg agaagatgaa gcgcaccgag ttgggcaatc atttcgaggg ctgcaccatc 1981 accgtgcgtg tggagccgcc gtcgtttaat aagaagaagc cagaggagtc taaagcctcc 2041 aggaagagct cctcctcctc caagcaaacc ctgcgcaact gcggctacac cgaaaatgag 2101 atagccaaac tgaatttgag ctcctcctcc agcgaggatg agctaacgcc acgccagcgc 2161 cgccagcgca atctcttcaa gcagaccgtc ggctgcccca agtgcggcca ggagctgatg 2221 ggccaccagc tggaggcgca ccgctccatt tgcaagaaga ggcgttagaa agttaaattt 2281 atcattcttt gttttctaac tgattaaata atgttacaaa a