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LOCUS XM_070218703 3484 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_070218703 VERSION XM_070218703.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3484 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3484 /gene="HP5" /note="Heterochromatin protein 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108066944" CDS 284..2689 /gene="HP5" /codon_start=1 /product="neurofilament heavy polypeptide isoform X2" /protein_id="XP_070074804.1" /db_xref="GeneID:108066944" /translation="MDIFDMVKAAPPPQTIAPVDRKISTPSPIAPDSPYNSDLLESGN LSNDEDLDKQATPDDSSFHLPSNQSSKTEESPFKMPKKVKKKEELGSIDLKSSSDEEQ DEPTFKKPRKSEEYHKSPAKPHKKRAAETLEDSKDSSEEEQKNPGPTKTKAQQKMFND PEIRECRVRVRRLTQLEIDAAFESLAKSPFADSSPRKMGRGRPRKTNPSPPQKKQNKI HIKVPLQNGAKKRAMHHQLARGHTPPPSLSRRGNKSPEKPKQKLKAKQKKPLRGRNAS QALIQRFGARFFDCVVRIKRTPWPNPLGKKGRSRKSNLSVSFSEAVEILGSAEGHSRR ATFGSISAKSSPKPTRLQRVDATGNVLEDIALTSTPLTPLAQSAGPSTSSGGSREKGK RRSCNGSPMGGRLKRPHQRLPLSSLASLRLDDGPNSGEDEEYIVPNELPGIKRPATPP LKKKKISFTTTISDDEDEKPPLPKKPKDGPKKQPKVLKESVIKKAEKSHKEKERKQEK SNEIVKEKLPLPEIKAADKVEVKPPENEANEVERDGEAQKKSETEAAEEKRDESEEEK PEEEEKLEDKTKENPQEAQEEEAPKEETSEAVEENAEETSENLNESLQNPTEEEKPGE EEEKEELRQLASPKSQLPLLVPSATEDNEEDILEIQTSLDDVRQLHTPSSRLSTPKPR SRLDSGESDCSFKSASDHDKQAAVMEATEEQEEREAEEEQQQAEETLEDQLTAAAITD DELELPANELPAELMTPPSAPRTTNGGDPTSGSSASAPYYSPIESIPTLDDEVLGQLV DYK" polyA_site 3484 /gene="HP5" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgcaatttcg cgggtatttt cccaggcgac ggtcacaccg cgtgatggcg tctttaaaag 61 tctaaaaatt atcagcgttt tagctgaatg aaaacgcgat tttcgaggcg catgcggtaa 121 ttgggtgggc gaaataaact aaaatcgcgc gccaggaatt gtaggcggtt aaaggagccc 181 ccttaagcgg gcgaacgagc agctaattgg gcaaataaaa cgagtgttcc gcagcgcttt 241 tcattttttg tgggaaaatc gcaacgggcg gcattctgcg ataatggaca tttttgatat 301 ggtaaaagcg gcgccgccgc cgcaaacgat agctccggtg gaccgaaaga tctccacgcc 361 gtcgccaata gcgccagatt ctccctataa ctcggacctt ctggagagtg gaaatctatc 421 gaacgacgag gatttggata agcaggctac tcccgacgat tccagctttc atttaccttc 481 caaccagagc tcaaaaacag aggaatcgcc ttttaagatg ccgaaaaaag taaagaaaaa 541 ggaggaactc ggttccatag atctaaagag ctcctccgat gaggagcagg atgaaccgac 601 gttcaagaag ccgcgcaaga gcgaggaata ccacaagtcc ccagcgaaac cgcacaagaa 661 gagggcagcg gagacgctgg aggactccaa ggactcctcc gaggaggagc agaagaatcc 721 cggacccacc aaaaccaagg cccagcagaa gatgttcaat gatcccgaga ttagggagtg 781 ccgggtgcgg gtgcgtcgcc tcacccaact agaaatagat gccgccttcg aatcgctggc 841 caagtcaccc tttgccgact cctcgcctcg caaaatgggg cgtggcaggc ccaggaaaac 901 caacccatcg ccgccccaga aaaagcagaa caaaatccac atcaaagttc ctctgcagaa 961 tggcgccaaa aagcgggcga tgcatcatca gttggcccgt ggacacacgc cgccgcccag 1021 tttgtcgcgt cgtgggaata aatccccaga gaaaccgaaa cagaagctta aggccaagca 1081 aaagaaaccc ttgaggggcc gcaatgccag ccaggcgttg atccagcgct ttggcgcccg 1141 tttctttgac tgcgtggtga ggatcaagcg aacgccttgg ccaaatccgc tgggcaagaa 1201 gggccgctcg aggaaatcca atctatcggt gtccttcagc gaggccgtcg aaattctggg 1261 cagcgccgag ggacattcgc gtcgggcgac cttcggttcg atatcagcca agtcgtcgcc 1321 gaagcccaca cgtttgcagc gcgtcgatgc cacgggaaat gtgctcgagg acatagcatt 1381 gacctccacg ccgctcacgc cgctggccca aagcgcggga ccttcaacct ccagtggcgg 1441 atcgcgcgag aagggcaaac ggcggtcgtg caacggctca ccgatgggcg ggcggctcaa 1501 gcggccgcac cagcgactgc cgctctccag tttggccagc ctgcgcctgg acgatgggcc 1561 caattccggc gaggacgagg agtacatagt acccaacgaa ctgccgggca tcaagcgacc 1621 tgccactccg ccgctcaaga aaaagaagat atccttcacc acgaccatca gcgacgacga 1681 ggacgagaag ccgccgctgc caaagaagcc gaaggatggc ccaaaaaagc agccaaaggt 1741 cctcaaagag agcgtcatca agaaggctga gaaatcgcac aaggagaagg agagaaaaca 1801 ggaaaagtcc aatgagattg ttaaggaaaa gctgcccttg cccgaaatta aagccgccga 1861 taaagtggag gttaaaccgc cagaaaatga agcaaatgaa gtagaaagag acggagaagc 1921 gcagaagaaa tcagaaacag aggcagctga ggaaaagcga gatgaaagtg aggaggaaaa 1981 gccagaggaa gaggaaaaac tagaagacaa aacaaaggaa aatccacaag aagcacaaga 2041 agaggaggct ccaaaggagg aaacatcaga agcagttgaa gaaaatgcgg aggaaacctc 2101 ggaaaacctc aatgaatccc tgcaaaatcc cacagaagag gaaaagcccg gggaagaaga 2161 ggaaaaggag gagcttaggc agttggccag ccccaaaagc caactaccac tcctcgtccc 2221 gtccgccacc gaagataatg aggaagatat cctcgagata cagacgtccc tggacgatgt 2281 ccgccagctg cacacgccct catcccgcct cagtacgccc aagccgcgca gtcgcttgga 2341 ttctggtgaa tccgattgca gcttcaagtc cgccagcgat cacgacaagc aggcggcagt 2401 aatggaggct accgaggagc aggaggagcg ggaggcggag gaggagcaac agcaagcgga 2461 ggaaaccctc gaggatcaac tgacagcggc tgccattacc gacgacgaac tcgagctgcc 2521 cgccaacgaa ctgcccgccg agctaatgac cccgccctcg gcgcccagga caacgaatgg 2581 cggcgatcca accagcggat ccagtgcctc ggcgccctac tactcgccca tcgagtccat 2641 acccacgctg gacgacgagg tccttggcca gctagtcgat tacaagtaga gaagcttaag 2701 ttttcaaagc ccgactttca attgaactcc agccgccatg ctatttcccg gggcactctg 2761 gacgacataa tgactgcgtt agaatcctag gaagctggct aatttcgcat ccacaactaa 2821 cagatacacg agaagcattc acagacatag atacacactc acatccacaa acagaagcga 2881 ttagaaggtg aattaaggag cgattaggtt tgaacttagt ctggctttta aatatgttcc 2941 ccgcgaatga tcaagaaata gtcgtacgtt tacttttaaa gacaccttca ttttccacac 3001 ggtactcaaa ttaaaaatac taaagtattt tttttaagag aaagcttgaa agctggcaaa 3061 cttgaataat ttgcactcaa ataggttgct gatctagtca gctaaactgg acttaaacct 3121 taaacacaac tcaattactc atatttctgt gtgaacaaga aacaattgtg gaaataaatt 3181 aattagtcag gaaaattaaa gaagttttag atgaagaaaa aacatataat taatttgtaa 3241 tgtttaagtt gcttaaacag atcgttatgt tagttatacg cgctaaagga atacgtattg 3301 ttcatttccc cccttttttt tgacaaccta gatttcctaa gtataaaatt gcattctact 3361 gcacatatat tatataaata tatttaagta aaaatcatct taaaatagtt gtaaattcaa 3421 tgtattaatg agcaaaataa tatgtatgta ttgtaaaaag aaaaaaaaaa cagagtataa 3481 aata