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LOCUS XM_070218699 2883 bp mRNA linear INV 09-DEC-2024 alpha7 (nAChRalpha7), transcript variant X2, mRNA. ACCESSION XM_070218699 VERSION XM_070218699.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2883 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2883 /gene="nAChRalpha7" /note="nicotinic Acetylcholine Receptor alpha7; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108066885" CDS 246..1730 /gene="nAChRalpha7" /codon_start=1 /product="neuronal acetylcholine receptor subunit alpha-7 isoform X2" /protein_id="XP_070074800.1" /db_xref="GeneID:108066885" /translation="MKRQSLSRRLDNLFCSSQETNMSFPQPHTLPEAPANGGKMLVYG LGLLIMIPACTAGPHEKRLLHALLDNYNSLERPVVNESDPLQLSFGLTLMQIIDVDEK NQLLITNIWLKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTY ATNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQD EAGGDISSFITNGEWDLLGVTILLSLTVFLNMVAETMPATSDAVPLLGTYFNCIMFMV ASSVVSTILILNYHHRNPDTHEMSEWIRVIFLYWLPCILRMQRPGQVGYECPPPPSSS SSSNSGEKKQQIQNVELKERSSKSLLANVLDIDDDFRCNHRCASATLPHQPTYYRTMY RQGDDGSVGPVGPAGPVVDGRLHEAISHTCLTSSAEYELALILKELRWITEQLKKEDE TSDITRDWKFAAMVVDRLCLIIFTLFTIIATLAVLFSAPHFIFP" misc_feature 417..1691 /gene="nAChRalpha7" /note="Cation transporter family protein; Region: LIC; cl42365" /db_xref="CDD:455710" misc_feature 507..965 /gene="nAChRalpha7" /note="extracellular domain of nicotinic acetylcholine receptor; Region: LGIC_ECD_nAChR; cd18997" /db_xref="CDD:349798" misc_feature order(528..530,534..536,552..557,576..578,642..644, 648..650,675..680,684..686,690..695,705..707,711..716, 726..734,738..740,768..770,774..776,780..782,792..794, 858..860) /gene="nAChRalpha7" /note="pentamer interface [polypeptide binding]; other site" /db_xref="CDD:349798" misc_feature 795..839 /gene="nAChRalpha7" /note="Cys-loop [structural motif]; Region: Cys-loop" /db_xref="CDD:349798" ORIGIN 1 cgaaaagcat tagattagaa agaaagaaag tcagtggctc caaaaagttg gtaacaagta 61 gccgaagtaa ttcgaatatc gactataaca ccaacgtacc ggaggacaga caacaagcaa 121 aatgcaaaac tatggaagtg aacttaaggg aggctgagtc gtcttactaa cttgctaact 181 gtctgcgcgc ccaaacatct gattatcgga ttcggattcg gattccaagg gttaagaagt 241 aagatatgaa gaggcaatca ctgagtcgtc ggttggacaa tctattctgc tccagtcagg 301 aaacaaacat gagcttccca cagccgcaca cattgccgga agccccagca aacggtggta 361 agatgctggt ttatggcctg ggtcttctaa ttatgatacc ggcttgtacg gctggacccc 421 atgaaaagcg gttgctacac gcccttctgg acaactacaa cagcttagaa cgtccggtgg 481 tcaacgaatc cgatccattg caactgagct tcggactaac actcatgcag attatcgatg 541 tggatgaaaa gaaccaactg ctaattacga atatttggtt aaaattggaa tggaatgaca 601 tgaatcttcg atggaattcg agtgaattcg gaggtgtacg tgatcttcgg attccaccac 661 atcgcttatg gaaaccggat gttctaatgt acaatagtgc ggatgaggga ttcgatggga 721 cgtatgccac aaatgtggtg gtgcggaaca atggaagctg tctgtacgta cctccaggta 781 tattcaaatc tacatgcaag atcgatatta cgtggtttcc attcgacgat caaagatgtg 841 agatgaagtt tggttcatgg acctacgatg gttttcaatt ggacttgcaa ttacaagacg 901 aagcaggagg agatatttct agctttataa caaatggcga atgggacttg ttaggagtta 961 caattttatt atcgcttaca gtcttcctca acatggtggc cgaaacaatg ccggcgacct 1021 ctgatgcagt gcccctgctc ggaacttatt tcaattgcat tatgtttatg gtggcctcat 1081 cagttgtgtc aaccatactt atcctcaatt atcatcatag aaatccagat acgcatgaaa 1141 tgagtgaatg gataagagta atattccttt attggttacc ttgcatattg cgcatgcaaa 1201 gacccggaca ggttggctac gaatgtccgc cgccgccctc atcatcgagt tcatctaatt 1261 ctggcgagaa aaagcaacag attcaaaatg ttgagctcaa ggagagatct tccaagtctc 1321 tgctggccaa cgtcctcgac atagacgatg actttcgatg caatcatcga tgtgccagtg 1381 cgactttgcc tcaccagcca acgtattaca ggacgatgta caggcaaggg gatgacggca 1441 gcgtgggacc agtgggtcca gctggacccg tggtcgatgg gcgtttgcac gaagccattt 1501 cgcacacctg tctgacctca tctgcagaat acgaactggc gctgatactc aaagaactgc 1561 gttggataac ggagcagcta aaaaaagaag acgagacaag cgacataaca cgagattgga 1621 agtttgcagc catggtcgtc gatcgtttgt gccttattat tttcacttta tttactatta 1681 tcgccaccct tgctgtccta ttttcagcgc cacatttcat tttcccgtaa gcggaaatgc 1741 gttgcaggga aaaaatgtgg agcagcaagt taacagcaag tgacaggcca cagaagtttt 1801 tgtggtttat tgtgaagtat atatgaagcc aatcaaaaat attaggaaca aagaacaaaa 1861 aacagcaaca acaacaaccc gaacctaagc ttttcaaact gaaatacttt gacagtcaaa 1921 gagttttgct attcaacatt ttgatatatt ttaaagatgt gtctgatggt tataaaaaaa 1981 atattataat gaattgagat agtaacgtat gtacgtatgt gaatgcattt tgtataaaaa 2041 ccagagagaa aaacgaaata caaaaaaaaa aacgaagaaa aaaaaacccc taataataaa 2101 atcggaatct gggcataaat gtacgttgcc gtgtgcattt cgattcgccc attagataca 2161 aagaagaggt ttctaaatct aaatccaaat cgcgaagcgc tcgtagatgc aatccacctc 2221 cctctccata tatctatatt cgatattcga tcgaggagcg ccaaaacatt taaccgactc 2281 gagtaggcag aatgagagag tgacatttaa ggatatacac aagtgtatac agcttcacac 2341 tattgttaaa aaaaaaagaa aagagagcaa ttagtattta aatagtctgt atgcagcttt 2401 caaaaagtta aactattttt tttttgattt gattcgaatt acttttattt ggtttcttgg 2461 ttcccatgct attcaatatt caaagaactg tatacaaatg tgttgctttg atataagaaa 2521 tggattgaca atatacattg gattgcaatc cagccacaac aaatgcaaat tgaacgaata 2581 caaaagtgaa ttgtgaaatt gttcccggta agaaaaggaa actgcacttc aataagagaa 2641 agtcatttaa ctgaaatgat cgcacaataa attcatagat gatacttaaa agctaaagtc 2701 aaaattgaac acacactaga gcttgaaaaa tatcgatatt ttcgatattt tttgctacta 2761 ttccttgaaa acatcgaaat tatcgatacg atattgtgaa actatcaaaa atatcgataa 2821 ttttcaagct ctaacacaca gctacacaca acaactaatc acagttgtga taaacaaaac 2881 aaa