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LOCUS XM_070218698 5889 bp mRNA linear INV 09-DEC-2024 variant X3, mRNA. ACCESSION XM_070218698 VERSION XM_070218698.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5889 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5889 /gene="kek5" /note="kekkon 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108066881" CDS 950..3706 /gene="kek5" /codon_start=1 /product="leucine-rich repeat-containing protein 24" /protein_id="XP_070074799.1" /db_xref="GeneID:108066881" /translation="MMARRLGILLLLLLPLAAGTSDWMQSCGPCHCHWNSGKKSADCK NKALTKIPLDMSNEMQVLDFAHNQIPELRREEFLLAGLPNVHKVYLRNCTIQEVHREA FKGLHILIELDMSGNRIRELHPGTFAGLEKLRNVIINNNEIEVLPNHLFVNLSYLSRI EFRNNRLRQVQLHVFAGTVALSAISLEQNRLAHLHRETFRDLQKLMHLSLQGNAWNCS CELQDFRDFAINKRLYTPPTDCQEPPQLRGKLWSEVPSENFACRPRILGSVRSFVEAN HDNISLPCRIVGSPRPNVTWVYNKRPLQQYDPRVRVLTSVEPMAAESQSSVLTSELRI VGVRASDKGAYTCVADNRGGRAEAEFQLLVSGDYAGAVSSSDGMGLGGMGAIGAPTID PQTNVFLIICLITTTLLLLLIVVVLALFWYCRRIKTYQKDTTMMSGDGLISSKLDKTH NGSMLEGSVIMEMQKSLLNEVNPVEKPPRRTDIESVDGGDDVLEIKKTLLDDTVYVAN HSRDEEAHSVALSDTTTTPRSRHTYVDDAYANSLPPDLLAFPARVPPTSPSMQSSQSN IPDQVIYGIRSPPSLTSPVYTHMTPHGIYGTKTLTAPHNGFMTLQHPKSRNLALIATA NSSRQHQHQLNHQQQQLQLNHQQQQQHLLQQQQQHPLATTSPFLPAPVVYSPATGVVM KQGYMTIPRKPRAPSWAPSTSGGATGGGTIQLSEFQSPTSPNPSETGTATTAELQAEP VYDNLGLRTTAGGNSTLNLNKIAGGSSNSGSQAAGQQYSMRDRPLPATPSLTSVNSAN NAANASKIYEPIHELIQQQQQQLQQQQRLSSLDTEPLYGVRHQGITILPGSSISGAGL AYISPVPSAVSPSHAGDSPKLAKIPPRPPPKPKKKMSVTTTRSGQGSTSQLFDDEGED GTEV" misc_feature <1127..>1588 /gene="kek5" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 1127..1201 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1202..1273 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1274..1345 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1346..1417 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1418..1489 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1490..1561 /gene="kek5" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1586..1732 /gene="kek5" /note="Leucine rich repeat C-terminal domain; Region: LRRCT; smart00082" /db_xref="CDD:214507" misc_feature 1787..2041 /gene="kek5" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 1787..1801 /gene="kek5" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409570" misc_feature 1826..1840 /gene="kek5" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409570" misc_feature 1922..1951 /gene="kek5" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409570" misc_feature 1979..1996 /gene="kek5" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409570" misc_feature 2018..2029 /gene="kek5" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409570" polyA_site 5889 /gene="kek5" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtaagcccac tagaattcag atgtgtgtgt acgtgtctag ttgttgacct tcacctgtgc 61 gggacacaga aaagaaacat gttttcataa ttgaaatgac taatgaatga cgttcggtga 121 ttcaaccagc accagctgca tgcactcgca tttcgcattt gattgagcgc ccctctggct 181 atcaattatt ccgcaagtcg agaaccgagc acagccggct atagattatt aggccgtaat 241 ggagcctgcc cggtgatcgt ggactatatc atcacgtccg actggattaa gtcttaaaat 301 attcatttaa aactaaagca ccaaagtcat aaggttgtcg tcgtcgtcag cagcagcagc 361 caatcgtcat ggtccttcga gccttcgagc ataaacattg aaaacaagca taaaaacaac 421 cgagacacgt gaagcaacga aaaagaaaaa aaactgaaac tgaaaaagga ccaaggacga 481 aggatagttc cgccggcact cttggaactt gtttttgaag ggaaacctga ttaccaggtt 541 cttgttaaat gggtaaaaac atcagcagga gcaggagaag cacggctatt tgcgagctta 601 gagcccacca ctgtccgccg ggacgacggg acattaatta atcacggcct tgtcattcgc 661 aaggatcaag gagtggcaca gcgaacgaac gaaggaagaa aaaaacaaca caagccgaaa 721 gagaagccga agcgaagggt gcagaaatca aattaacagt gcgtcaaaag gattaacccc 781 gaaaaagggc aggagtttag tttagagcac gtacacagga cgcggcgagg cgagtaaaga 841 gccccggact accggaatcc cgaccacttg gtggcacgtg ttcggtggct cgttgtcgcg 901 gattataaac aaatcccgat acacagaacc cagaacccaa aaccaagcta tgatggccag 961 acgactgggg attctcctac tcctcctcct ccccttagca gctgggacat ccgactggat 1021 gcagagctgc ggcccctgcc attgccactg gaattcgggt aaaaagagcg ccgattgcaa 1081 gaacaaggcg ctgacaaaga ttcccctgga catgagcaac gagatgcagg tgctggactt 1141 tgcccacaac caaatacccg agctgcggcg cgaggagttc ctcctggccg gtttgcccaa 1201 tgtgcacaag gtctatctgc gcaactgcac catccaggag gtgcatcgcg aggccttcaa 1261 gggtctgcac atcctgatcg agctggatat gtcgggcaat cggataaggg aactccatcc 1321 gggcacgttc gctggcctcg agaagctgcg caacgtgata atcaacaaca atgagattga 1381 agtgctgccg aatcacctgt tcgtcaatct cagctacctt tcacgcatcg agtttcgaaa 1441 caatcgactg cggcaagtgc aactgcatgt gtttgccggc acggtggcgc tgagcgccat 1501 ttcgctggag cagaatcgat tggcccattt gcatcgggag acattccggg atctgcagaa 1561 gctgatgcat ttgtcgctgc agggcaatgc gtggaactgc agctgcgagc tgcaggattt 1621 ccgggacttt gcgatcaaca agcgtctgta tacgccgccc accgactgcc aggagccgcc 1681 gcagctgcgt ggcaagctgt ggagtgaggt gccctctgag aactttgcct gccggccacg 1741 catcctgggc tccgtgcgat cctttgtgga ggcgaatcat gacaacatct cgctgccctg 1801 ccgcattgtc ggcagtccgc ggccgaatgt cacctgggtg tacaacaagc ggccgctgca 1861 gcagtacgat ccccgggtgc gagtcctcac ctccgtggag ccgatggcgg cggagtccca 1921 gtcctcggtt ctcacctcgg agctgcgcat cgtgggcgtg cgggcctcgg acaagggagc 1981 ctacacctgt gtggccgaca atcggggagg aagagcggag gcggagttcc aattgctcgt 2041 cagcggcgat tatgccggcg ccgtatcctc gtccgatggc atgggattgg gcggcatggg 2101 tgccattgga gcgcccacca ttgatccgca aacgaatgtg ttcctgatca tctgcctgat 2161 taccacgaca ctgctgctac tcctgattgt cgtggtgctg gccttgttct ggtattgccg 2221 aaggattaag acctaccaga aggacaccac catgatgagc ggcgatgggc tgatctcgtc 2281 caagctggac aagacgcaca acggctccat gctcgagggc tccgtcatta tggagatgca 2341 gaagagcctg ctcaacgagg tcaatcccgt cgagaagccg ccacggcgca cggacatcga 2401 gagcgtggac ggcggcgacg atgtgctcga gattaagaag acgctgctcg acgacacggt 2461 ttatgtggcc aaccactcgc gggacgaaga agcccactcg gtggccctct cggacacgac 2521 gaccacgccc cgatcgcgac acacctacgt ggacgacgcc tacgccaata gcttgccgcc 2581 ggacctgctg gccttccccg cccgcgtgcc gcccacctcg ccctcgatgc agtcctcgca 2641 gtcgaacatc cccgaccagg tgatctacgg catccgctcg ccgccctcgc tgaccagtcc 2701 cgtctacacg cacatgacgc cgcacggcat ctacggcacc aagacgctca cagctccgca 2761 caatggcttc atgacgctgc agcatccaaa gtcgaggaac ctcgccttga ttgccaccgc 2821 caacagtagt cgccagcatc agcatcagct gaatcatcag cagcagcagc tgcagctgaa 2881 tcaccagcag cagcagcagc atctcctcca gcaacagcag cagcatccgc tggccaccac 2941 atcgcccttc ctgcccgccc ccgtcgttta ctcgccggcc acgggcgtgg tcatgaaaca 3001 gggctacatg accataccgc gcaagccgcg agcacctagc tgggcgccca gcacctcggg 3061 tggagccaca ggcggaggaa ccatccagtt gagcgaattc cagagcccca catcgccgaa 3121 tcccagcgaa acaggcactg ccaccaccgc ggaacttcag gcggagcccg tttacgacaa 3181 tctggggctg cgcaccacag ccggcggtaa ttcaacatta aatctaaaca agatcgcggg 3241 tggaagttct aattccggct cccaagccgc aggtcagcag tactcgatgc gggatcgtcc 3301 gctgccggcc acgcccagtt tgacgtcggt gaactcggcg aacaatgcgg cgaatgccag 3361 caagatatac gagcccatac acgagctaat acagcagcag cagcagcagt tgcagcagca 3421 gcaaaggcta agctccttgg acacggagcc gctgtacggt gtgcggcacc aggggatcac 3481 gatactgccc ggttcgagta tcagtggggc aggattggcc tatatatcgc ccgttccgtc 3541 ggctgtttcg cccagccatg ccggtgactc gccgaagctg gccaagattc caccgcgacc 3601 accgccgaag cccaagaaga agatgtccgt gacgacgacg cgcagcggtc agggcagcac 3661 cagccagctc ttcgatgacg agggcgagga tggcaccgag gtctagtttg gcacctagtt 3721 tggatgatat gagagtggag gaaacggaat ggtaacttgg agatgcagca aaatataaca 3781 tcaacatccg ctgttgcggc ttgtaaaaat agccgacaga agtaaggatt ctatactgtt 3841 ctgttccgtg gttcacgcca ctgcgtgact tgtgtgccaa acgactgatg taggttttag 3901 taattaaatc gatgaacatg caacacaaca gaagtcttcg gatgcaaata aacagaagac 3961 agaagacaga agagagactc caatccctta gggcgaattg aaatcgcttt tagaacagaa 4021 caaccatctc taatcccaaa ttcgtatttg cggaaatacg taaaaacacc caatttttaa 4081 atatatacca cctttttttg tgtagactat agttagtttg gtacaaaatg cattattcgt 4141 atatagagag acatatatat acacgcaatt ttaaagatta tatataaaca agaaatatcc 4201 tataatgaaa aaaaataata tatacaaaaa tccattttca aatcaacgac agtttattta 4261 agtgcaaaaa tttaaaaaaa caaaaacaaa aacataattt ttcaaaattt tgcaaaattt 4321 tataaaattg taaatgtcaa atgcatacag ttaatcgcat taagctatat ataaaataat 4381 tacatatata tatatatata tatactttgc gtaagaacaa ccacaaaata catccttaat 4441 tttttttttt gttttacgaa agccaccacg aatcgggaaa tgaactaaac acgaaagtat 4501 atttgatagc gggtaagttt gttaagtgca ttagagcgtt agggtaaaga taatgataaa 4561 gagtttgcat tcgcaattaa aacaatgaat tgaaacttct atgtatacat atagtctaga 4621 aagaaggcag aaaggcggca gcataagtgc ataagtgcag ctataataac gattgtacta 4681 gttataaaaa aaaaatatat atataaaata aatctgtatg tacatggact tacgtatgac 4741 attctaggca ttaagtacac aaattaaaaa agaacagaaa cataaacaga agaagaaaag 4801 ttataagcag gccatatatg tacgtatgtc tgagaatacc cttgaaatta ccttcacccc 4861 ttcacacacg actcatttaa tatccaaaca aaatatatat acaaggcatt tagcagcaat 4921 cattctaaat acatgataac gaatatagac cattaaagat taaagacaac aacaaagtat 4981 cgttaagaga aatgaaatta taaaaataaa tatcggataa ttcagcatgc tagctattag 5041 ctaccctcag tagttaaaga tcagatatca gatgattcac ctaccaaaac cttaccatac 5101 cttacctacc aatcaaacaa actatatacc ataatttttt ttatattatt tatattaatt 5161 gtacttttaa tttcctgcac cacctgcacc accatatagg cgatctatgc atctggatgc 5221 atttttattt aataaaaatg cactttcagg cactgccaaa ctactttatt tcataagtgt 5281 gaacaggaaa tagaaaaaaa aataaaatat taaataatat atgatttcct gttaaaggcg 5341 aaggcgaagg cgaaggcagg cctagaaatg atctgagagt taaataatag atgagacatg 5401 taaagttttc agccccatac ttgcccctag aaaaaacatt attcgattcg acttagggtg 5461 caatgatttc ataaacaaaa tcaacagaat aaatgtaccc aatccacaat tggttttaaa 5521 ttaaagtaag caaaagtatt acataaataa taagttacct tacgttaatt ttattgtgct 5581 ggtttttttt tgtattcagc gtttttacac agtaattatt tgtagaattt tctttacaat 5641 ttggacaagc gcgcaacata attgtaataa atatctcgga aacgcaaaaa acatttctaa 5701 aacctcgaaa aaaccataaa aatgacgttg cgaacaaatt gttcaaatta gctcaaaatc 5761 aaaacaatta taattaaaaa ttgtaatcta attgtaattg atagaagggt tcttatatat 5821 acgtttttta taattttgca taatttgcct aacatataaa atattgaaat aaactatgaa 5881 taaaacgaa