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LOCUS XM_070218687 1191 bp mRNA linear INV 09-DEC-2024 XlCGF8.2DB (LOC108067238), transcript variant X2, mRNA. ACCESSION XM_070218687 VERSION XM_070218687.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1191 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1191 /gene="LOC108067238" /note="gastrula zinc finger protein XlCGF8.2DB; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108067238" CDS 160..1176 /gene="LOC108067238" /codon_start=1 /product="gastrula zinc finger protein XlCGF8.2DB" /protein_id="XP_070074788.1" /db_xref="GeneID:108067238" /translation="MERNKMEQGFKNDDIEEEENADMLFRPQIYDEELALEREEQELE EWNLKNQNLLGGTAFFICRHCPEVFFSKMELAAHRPVHRLKSGRRKSTLELTCEDCGK VFQKRNALVDHMNAHQSQRNYPCPECPARFVQRSNRDCHVKNIHRKEYLHSCPNPGCE RRFEQKRERDQHVKTVHRKEKDFVCAECNASFSHPVNYRKHLASHSSEKKYDCPICRK LFGRAENRDIHLFVHSICKAYVCSVCGADYMRRTQLIRHSKERGHLNDPIVRQKPQFS PGLAQRPIGISGQVQKAAHLEDVEWSPEEDAKFQCPDEEASPGSIRKVHNGRTDQDMY ARYS" misc_feature 343..405 /gene="LOC108067238" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 448..510 /gene="LOC108067238" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(463..465,469..471,475..477,481..486,493..498, 505..507,547..549,553..555,565..570,577..582,592..594, 640..642,646..648,652..654,658..663,670..675,682..684) /gene="LOC108067238" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 532..597 /gene="LOC108067238" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 619..684 /gene="LOC108067238" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 712..774 /gene="LOC108067238" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(727..729,733..735,739..741,745..750,757..762, 769..771,811..813,817..819,829..834,841..846,853..855, 895..897,901..903,907..909,913..918,925..930) /gene="LOC108067238" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 796..858 /gene="LOC108067238" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 880..936 /gene="LOC108067238" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 caaacatcga tgtttccaaa atttataaaa acatcgatgc atcgatgttt tcatccactg 61 attcgatatc gctatcgata gaccggccgt caaaaaaaca aaccaactac ataaaacaaa 121 acaacattcc ggacaagttt taacagaatt attaaagaaa tggagcgaaa caaaatggaa 181 caaggattca agaacgacga tatcgaagag gaggagaatg cagacatgct attcagaccg 241 caaatctatg atgaggaatt ggccctggag cgggaagaac aagagctcga ggaatggaat 301 ctgaagaacc aaaacttact aggcggaacc gcgttcttca tctgcagaca ctgtccggag 361 gtattcttta gcaagatgga actagccgcc catcgccctg ttcaccggct caaaagtgga 421 cggaggaaat ccaccttgga gttaacctgc gaggactgtg gaaaggtctt tcaaaagcgc 481 aacgccctcg tggatcacat gaatgcccac caaagccagc gaaactatcc gtgtcctgag 541 tgtccggctc gctttgtgca acgcagcaac agggattgcc atgtaaaaaa tattcacagg 601 aaagagtacc tgcactcctg cccgaatccc ggctgcgaaa gacgtttcga gcagaagcgg 661 gaacgggatc agcacgtgaa aacagtccac cggaaggaga aggactttgt ttgcgctgag 721 tgcaatgcca gttttagcca tcccgtaaat taccgaaaac acttggcttc ccacagctca 781 gagaagaagt acgattgtcc aatttgtcga aagctctttg gacgcgccga aaacagggat 841 attcatctct ttgtccatag tatttgtaag gcctatgttt gctccgtttg cggagcagac 901 tacatgcgtc gcactcagtt gattcgccat agtaaagagc gtggtcattt gaacgacccg 961 attgttcgac aaaagcctca gttcagtccg ggccttgccc agagacccat tgggatcagc 1021 ggtcaggtcc agaaagctgc ccatctggag gatgtggagt ggtcgccgga agaggatgcg 1081 aagtttcaat gcccagatga ggaggctagc cctgggtcca ttaggaaggt ccataatggt 1141 agaactgatc aagatatgta tgcccgttac tcgtaaagca aaatgataaa a