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LOCUS XM_070218678 2545 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_070218678 VERSION XM_070218678.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2545 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2545 /gene="Cdc7" /note="Cdc7 kinase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108054426" CDS 129..2033 /gene="Cdc7" /codon_start=1 /product="cell division cycle 7-related protein kinase" /protein_id="XP_070074779.1" /db_xref="GeneID:108054426" /translation="MADRVMCQELATPGSHHYRRPKSNGLAASPHQMVYANGGGSWRA APRNQRLPGTGNKYMGKSSVVEEQQQQAAESEMLATPRTPKQSRNKSEDAINDLLVRI PDIGKLFDVHSRIGNGTFSTVLLGTLRRESHLPDSLRRKFAIKHHIPTSHPDRIMKEL QCMTKMGGTENVVGIHCCLRCDASAAFVMPYMAHDRFHDFYTRMDVPEIRLYMRNLLV ALRHVHKFDVIHRDVKPSNFLYNRRRREFLLVDFGLAQHVNPPPAMGSSSAVVNSHNN SKRPRERDAMEAVQQQIAPADAGLGGAVKRMRLQEDVSKMPLKPVNDIAEQHQQQDGS NPVQPVQQPVQQGQQQQVDQAPSSSGSKYNTNRNAAGSSNANNAKCFCFANPSVCLNC LMKKEVHASRAGTPGYRPPEVLLKYPDQTTAVDVWAAGVIFLSIMSSVYPFFKAPNDF IALAEIVTIFGDQAIRKTALALERMITLSQRSRPLNLRKLCLRFRHRSVFSDAKLLKS HESVDGRCEVCRNCDQYFFNCLCEDSEYLTEPLDAYECFPASAYDLLHRLLEINPHKR ITADEALQHPFFTAAEEGEQTTGDQEADGTPRKIRRQRYHNHKTVAATPEQLKQQVAL DLQQSAINKL" misc_feature 447..1862 /gene="Cdc7" /note="Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 7 kinase; Region: STKc_Cdc7; cd14019" /db_xref="CDD:270921" misc_feature order(471..485,495..497,555..557,561..563,591..593, 645..647,693..704,714..716,720..725,822..824,828..830, 834..839,843..845,879..881,888..890,1326..1328,1332..1343, 1347..1349,1464..1466) /gene="Cdc7" /note="active site" /db_xref="CDD:270921" misc_feature order(471..482,489..491,495..497,555..557,561..563, 645..647,693..704,708..710,834..839,843..845,879..881) /gene="Cdc7" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270921" misc_feature order(591..593,720..722,822..824,828..830,888..890, 1326..1328,1332..1343,1347..1349,1464..1466) /gene="Cdc7" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270921" misc_feature order(876..896,969..980,1311..1349) /gene="Cdc7" /note="activation loop (A-loop); other site" /db_xref="CDD:270921" misc_feature <1341..1871 /gene="Cdc7" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" misc_feature <1773..2009 /gene="Cdc7" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" polyA_site 2545 /gene="Cdc7" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atcactcact agaaagtcaa aacacacaca cttattccct cgtttttggc tatagtttat 61 aatcgaaatt gtaccgtttt atccaaaatt tatcgtaggt tctctagatt tccagacgca 121 gatgcccaat ggccgatcgc gttatgtgcc aggaactggc gacgcccggg agtcaccact 181 atcgtcgccc caaatcgaat ggtttggcgg cgagtcccca tcaaatggtc tatgccaatg 241 gcgggggatc ctggcgagcg gcgcccagga atcagaggct tccaggaact ggaaacaaat 301 atatgggaaa gtccagtgta gtggaggagc agcagcagca ggcggcggaa tccgaaatgc 361 tggccacacc gcgaacaccc aagcagtccc gcaataaaag tgaagatgcc atcaatgatc 421 tcctggtgcg aatacccgac attggcaagc tgttcgatgt tcacagccgg attggcaatg 481 gcacctttag caccgtcttg ctgggaactc tgcgcaggga atcgcatctg ccggacagtc 541 tgcgtcgcaa gttcgccatc aagcatcata tacccaccag tcatccggat aggataatga 601 aggagctgca gtgcatgacc aagatgggtg gcaccgagaa cgtggtgggc atccactgtt 661 gcctgcgctg cgacgcctcc gccgcctttg tgatgcccta catggcgcac gaccgtttcc 721 acgacttcta cacgcgcatg gatgtgcccg agatccgttt gtatatgcgc aatctgctgg 781 tggccctccg gcatgtccac aagttcgatg tgatccatcg cgacgtgaag cctagcaatt 841 tcctctacaa tcgccgacgt cgtgagtttc tgctggttga ttttggcctg gcccagcatg 901 tgaatcctcc tccggcaatg ggatcttctt ctgccgtcgt caacagtcat aataatagca 961 agcggccgag ggaacgggat gccatggagg cagtgcagca gcagattgca ccagcggatg 1021 ctggcctggg cggagctgtg aagcgcatgc gtttgcagga ggacgtcagc aagatgcctc 1081 taaagccagt caatgatatt gccgaacagc atcagcagca ggatggctct aatcccgtcc 1141 agccagtgca acagccagtg cagcaggggc aacagcagca ggtggatcaa gcaccctcct 1201 catctggcag caagtacaat acaaatcgca atgccgcggg atcgtcgaat gcaaacaatg 1261 ccaagtgctt ttgctttgcc aatccatccg tttgcctcaa ctgcctgatg aagaaggagg 1321 ttcacgcgtc gcgtgctgga actcctggct atcggccgcc cgaagtgctg ctcaagtatc 1381 cagatcaaac gaccgccgtg gatgtttggg cagctggagt gattttccta tcaatcatgt 1441 catctgtata tcccttcttc aaagcaccca atgatttcat agcgcttgcg gagattgtaa 1501 cgatattcgg ggatcaggcg atcaggaaaa ctgctctcgc tttagagcgc atgatcacgc 1561 tcagtcagcg atcgaggcca ttgaatctga ggaagctgtg cctgcgcttt cgccaccgtt 1621 ccgtcttcag cgatgccaag ctgctcaaga gccacgaatc cgtggacggg cgatgcgagg 1681 tgtgccgcaa ctgcgatcag tactttttca actgcctgtg cgaggatagc gagtatctga 1741 cggagccgct ggatgcctac gagtgttttc cggccagcgc ctatgatttg ctgcatcgcc 1801 tgctggaaat aaatccgcac aagcggatca ccgccgacga ggcgctgcag catccgttct 1861 ttacggccgc cgaggagggg gaacaaacaa cgggggatca ggaggcggat ggaacaccca 1921 ggaagatccg gcggcagaga tatcacaatc acaagacggt ggccgccacg ccggagcaac 1981 tgaagcagca ggtggccctc gatctgcagc aatcggccat caacaagctg tgaaactagt 2041 cctcacatta tcacacacat tttgtatata aaactatacc ccaagtcaca tgtcacgatt 2101 gtatatacca cgcacaccca tctgaaatcc cagaagaacc agaagaaact cgtccagtgt 2161 acacaagtgt ccaagtggcc acatctactt acctcaagct gcaggaagaa taaccaaaaa 2221 aaccaaatgg agcacatata tttataggaa aaacgtttca atcatgaaca ataggaaaag 2281 gaataccaaa aaagctagga gagaatgatc atgaagatta tggccgccaa ggattgtata 2341 ttgtatgggc tggaatccgc gaaggcaagc cagcaaacca acaaagaaag tgcatggatg 2401 cactaaccat catgttgtat agttcgaata gtcttagcct agacctaagt ttaattattg 2461 tatatccgag agccgctcga gcggagatat atgaagcgaa aatatattta taccatgaag 2521 aatgaatgaa attgaaaata tcaaa