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LOCUS XM_070218661 7708 bp mRNA linear INV 09-DEC-2024 (LOC108063827), transcript variant X1, mRNA. ACCESSION XM_070218661 VERSION XM_070218661.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7708 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7708 /gene="LOC108063827" /note="uncharacterized protein CG43867; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108063827" CDS 432..6098 /gene="LOC108063827" /codon_start=1 /product="uncharacterized protein CG43867 isoform X1" /protein_id="XP_070074762.1" /db_xref="GeneID:108063827" /translation="MSDEVPLGRLSQIFDTLTNLQQQQQQHLRSQEQLHPPHPHSHPH THPQSPADQRRRSASSSPSPSASVSASTSGRATPSLGVASPLNTLQYYSHNAHNNYLL RPQDVATSGYLHTFPSHLYHHQQHHHQVHHLQQHSQPPSLPTQLGGGVTQRGCLSGSQ SLQGSPLLAKRATSFSGQIPMAQGRFGATGGGTGVTASTPNSPRLLPRRVPRPPPIPA KPNQVKTAAAASDQQQPRDSSSTAPTIVQSHVNPVLAALDAPDAPWPHFSTLTEHLDV HQVNNYGQALPEINWQERCLELQLELHRSKNQAGRIRDMLREKLTELEQRVIEAEERA EEAEDKVRAMEQRLSEWPKPPPQHPHPHQPVPASHPQEQQQQQQARSNCSPSHQVGGG ATAAGSTVSGAPPPTQEAEKTITSLEIQVEEQRQLRLHDARQIEAKAAKIKEWVNNKL RDLEEQNQLLREQNVKCNQQLELLKNHIANQSQRHSIVGPVRNSLSLDVQDFAGSGSN PEHRRRSESLDPQDPIIGRPLTSSYPHHQHRRNLSMEPQELERNLVAAVDGLTLAPLS SISSKAPGSAARPDSSDTDTAHDYAEIYTPSCEKLPAWMKNNPALMASGGNSSTTTTT TSELGVPRPPTPPLHRFPSWEAKIYQVANDGLAGAGGGTAESAAIQEPDIQEGTGTGT NLSNGRRHGHSHGSGTGTVTAGTGDGHGTLGSTPGTPLPPSRQQQTASGGFCDISVPV YATVKGRASQIRSMPFTGDSSDDSSDGEDHAVMLTHHSHNSSSTENTETSTSGSASSP SKSLKTSSSLSPAKRSGSESPKNAKARVHLQPRTTSTSHTNQQHLQPQSFHTHTHHQH HTLPHQYQVQNHNHQLGAYTLAPSSGQITLPRPHGHALQTPTASKAPSPLQQHMRGTV ISDLSFESGLSDDYALPPDAVSESTCMDASMPSLLMRQSYVDSPSKKIESLEKMGHLA KLGGKLKTWRKRWFVLKNGSLNYWKSQHDVQRKPQGQIQLDEACRINRAEGASTFEID TGKKVYYLTADSHATMDDWIRVLQNVQRRNATKLLLSRDDQKPTVQGWVTKVKNGHPK KCWCVLLGKMFLYFKAPVETNPLGQINMRDARVEEVEHVSDSDSEEREDAAQDQARLT VAIYPAHQGPTYLILSGKPERDNWLYHLTVVSGGGPSAGTQYEQLVQKLMETDGDPNC VLWRHPILLHTKDTITAPLSSMHTETMQPEAIKLFKSIQLFMSVAVNQPGIDYHVVLA QNALQHALDMPELQTEMICILIKQTSRHMGQKLSVGVQVNKKLGKQTRQLLLCATQSL FTCDTQQAGHAQANGSSPTSIQAPAATPIIDCKSNPPAYSFVQGWQLLALAVSLFVPR SSRLLWYLKLHLSRNADTKTETGKYAAYCERALERTLKNGGRETKPSRMEVLSILLKN PYHHSLPHAIPVHMMNTTYQVVSFDGSTTIEEFQATLAHELGTRDASNGFCLFSDDPI EKDLEHYLEPLAKLCDVISKWETALREKGSGKFENSRVIQLSYKNRLYWKHTIKCETD KERLLLCYQTNSQIVQGRFPLSRELALELASLMSQIDMGDYSLEKSRDVGVGLKGLDK FYPYRYRDALGAEQLKDVQELLVSKWMLLKGRSTLDCVRIYLTCCRKWPYFGACLFQA KPRQSPESSMGTTGAATPVAWLAVAEDALNVLELSTMAPVARYPYSSVMTFGGCQDDF MLVVSHDDGSGEQKLLFAMSKPKILEITLLIADYMNALGHTVPGTPQMNSLTRNGSHR SLRASQRPTLGAGGSAVATTTGFSTNATTTAHNTLNSHATHTLNSNHSHTLSSSHHAG GGGGGSQPGTLSSGHHHPQHHHHHQQQQQHHQPDILKSTPDHQRIK" misc_feature <1656..>1883 /gene="LOC108063827" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 3330..3617 /gene="LOC108063827" /note="Pleckstrin homology (PH) domain containing, family H (with MyTH4 domain) members 1 and 2 (PLEKHH1) PH domain, repeat 1; Region: PH1_PLEKHH1_PLEKHH2; cd13282" /db_xref="CDD:241436" misc_feature 3648..3953 /gene="LOC108063827" /note="Pleckstrin homology domain; Region: PH; smart00233" /db_xref="CDD:214574" misc_feature 4071..4730 /gene="LOC108063827" /note="Domain in Myosin and Kinesin Tails; Region: MyTH4; smart00139" /db_xref="CDD:214535" misc_feature 4758..5060 /gene="LOC108063827" /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in Caenorhabditis elegans max-1 and its homologs PLEKHH1 and PLEKHH2; Region: FERM_F1_Max1_like; cd17094" /db_xref="CDD:340614" misc_feature 4767..5429 /gene="LOC108063827" /note="Band 4.1 homologues; Region: B41; smart00295" /db_xref="CDD:214604" misc_feature 5415..5726 /gene="LOC108063827" /note="Pleckstrin homology-like domain; Region: PH-like; cl17171" /db_xref="CDD:473070" polyA_site 7708 /gene="LOC108063827" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atcaggaaat atggaaatct tcgatatcaa agcgaattgg aacagcttta tcataaatcg 61 aatcaggaaa tatggaaagc tgtacaagga tcgacaccaa tcaatgagaa acattaccaa 121 catacgaact tcgataaatc tactcgaatc cctacaaata aagggtataa atgcggcaag 181 aacaacaaca acgacaacaa agccaagaag gagaggcaca aagaggaaga agaagagttt 241 gcgcagtcac gtgtgcagtc gacgtcgacg gcggccgcgg cagaggaaaa ttcccatgcg 301 gaaaattcac attcgcgatg atgatggaaa gcgagacgat gatgatgaag ctgttgaagg 361 agggaaaacc agcagcagcg gcagcaacaa caacaactag cagctgttag agcgagacag 421 ctaccgcgtc aatgtccgac gaagtgcctt tgggtcgcct atcgcagatc ttcgatacgc 481 taaccaatct tcagcagcaa cagcagcagc acctgcgttc ccaggagcaa ctgcatcctc 541 cacatccgca ttcacatccg catacacatc cgcagtcgcc tgcggatcag cgtaggagat 601 ccgcctcctc atcgccatcg ccatcggcca gtgtctctgc ctcgacttct gggcgggcca 661 cgccttcttt gggcgtggcc agcccactga atacactgca atactacagt cataacgccc 721 ataataacta tttgctgcgg ccgcaagatg tcgccaccag tggctacctg cacacctttc 781 cttcgcattt gtatcatcat cagcagcatc atcaccaagt gcaccacctg cagcagcaca 841 gccaaccgcc ctcactgccc acccaattgg gaggcggggt aacccaacgt ggctgtctat 901 cgggctcaca atcgctgcag ggatcaccac ttttggccaa gagggcaacc tcctttagtg 961 ggcaaatacc aatggctcag ggtcgattcg gagccaccgg aggaggaact ggagtcactg 1021 catccacacc gaatagcccg aggcttctgc ctcgacgtgt gccacgccca ccgcccattc 1081 cggccaagcc gaatcaggtg aagacggcgg cggcagcgtc ggatcaacaa cagcccaggg 1141 attcttcttc gactgccccg acgattgttc agtcgcatgt gaatcccgtg ctggctgctc 1201 tcgatgcacc agatgctcca tggccacact tttcgacgct caccgagcac ttggacgtcc 1261 accaggtgaa caactacgga caggctctgc cggagattaa ctggcaggaa cgatgtttgg 1321 agctgcaact ggagctgcat cggtcgaaga atcaggcggg tcgtatacgc gatatgctgc 1381 gtgaaaagct aacggagctg gaacaacgcg tcattgaagc ggaagaacgc gccgaggaag 1441 ccgaagataa ggtgcgtgcc atggagcagc ggctgagtga gtggcccaag ccaccgcccc 1501 agcatccgca tccgcaccag ccagtgccag ccagtcatcc gcaggagcag cagcagcagc 1561 agcaggccag aagcaattgt tcgccgagcc atcaggtcgg aggaggagcc acggcagcag 1621 gatcaacagt atcaggtgca ccaccgccca cccaggaggc ggagaagacc atcacttcgc 1681 tggagatcca ggtggaggaa cagagacagc tgcgactcca cgacgcacga caaatcgagg 1741 ccaaggcggc caagatcaag gagtgggtga acaacaagct acgcgatctc gaggagcaga 1801 accagttgct gcgcgaacag aacgtcaagt gcaaccagca gttggagctg ctcaagaatc 1861 acatagccaa tcaatcgcag cgccacagta tcgtgggtcc ggtgcgcaat agcctcagcc 1921 tagacgttca ggactttgcc ggttcggggt ccaatcccga gcatcgcagg cgaagcgaga 1981 gtctcgatcc gcaggatccc attattggcc gaccgctgac cagctcgtat ccgcatcacc 2041 agcacaggcg aaacctctcg atggagccgc aggaattgga acgaaatctg gtggccgctg 2101 tcgatggcct aacccttgcc ccgctgtcca gcatctccag caaagctccc ggatcagctg 2161 ccaggccaga tagctccgat acggatacgg cccatgatta tgcggagatt tacacgccat 2221 cctgcgaaaa gctacccgcc tggatgaaga acaatccggc attgatggcc agtggcggga 2281 attccagcac caccaccaca accaccagtg aactgggcgt gccacggcct ccgacgccgc 2341 cgctgcatcg ctttcccagc tgggaggcca agatctacca ggtggccaac gatggactgg 2401 cgggagctgg cggagggacg gcggagagtg cggccattca ggagccagat attcaagagg 2461 gaacgggcac gggaacgaat ctctccaatg gccgacgaca tggtcacagt catggatctg 2521 gaacgggaac ggtaacggcg ggaactgggg atgggcacgg taccctgggc agtacaccgg 2581 gaacgccgct gccaccgtcg aggcaacaac aaaccgccag cggcggcttc tgtgatatat 2641 ccgtgcccgt ctacgcaacg gtcaagggtc gagcctcgca gatccgctcg atgccattta 2701 cgggcgattc gagcgatgac tccagtgatg gcgaggacca tgcggtgatg ctcacccatc 2761 attcacacaa ctcgtcgagc accgagaaca cggagacctc gacatcgggc agcgcttcga 2821 gtccctcgaa gagcctgaag acctcctcta gcctaagtcc ggccaagcga agtggttcgg 2881 agagtcccaa gaacgcgaag gcgcgtgtcc acctccaacc acgcaccaca tccaccagcc 2941 acaccaacca acagcatctc caaccgcaat cgttccatac gcatacgcac caccaacacc 3001 acacactgcc ccaccaatac caagtccaga atcataacca ccagttgggg gcctacacgc 3061 tggcgccttc gagtgggcag ataacgctgc cgcgtcccca tggccacgcc ctccaaactc 3121 caaccgcctc caaagccccc tcacccctcc agcagcacat gcgtggcaca gtaatttcag 3181 atctctcctt tgaatcaggc ctctcggacg actacgccct gccccccgac gccgtgtcgg 3241 agtccacgtg catggacgcc tcgatgccgt cgctgttgat gcgacagtcc tacgtggatt 3301 cgcccagcaa aaagattgag tcgctggaga agatgggtca cctggccaag ctgggtggca 3361 agctgaagac ttggcgcaag cgttggttcg ttctaaagaa cggatccctc aactactgga 3421 agagccagca cgatgtgcag cggaagcccc aggggcagat ccaactggac gaggcctgtc 3481 gcatcaatcg ggcggaggga gcctccacct tcgagataga cacgggcaag aaggtctact 3541 acctcacggc ggactcgcat gccaccatgg acgattggat ccgggtgctg cagaatgtgc 3601 agcgaaggaa tgccaccaag ctgctgctga gtcgcgatga ccagaagccg acggtgcagg 3661 gttgggtgac caaggtgaag aacggccatc ccaagaagtg ctggtgtgtg ctgttgggca 3721 agatgttcct ctacttcaag gctcctgttg agacgaatcc cctgggccag attaatatgc 3781 gcgatgcccg agtcgaggag gtggaacacg tttctgactc ggactccgag gagcgagagg 3841 atgccgccca ggatcaggcc cgactcacgg tggccatcta tccggcgcac cagggaccaa 3901 cctacctgat cctgtccggg aagccagagc gggataattg gctctatcac ctaactgtcg 3961 tttcgggcgg cggcccaagt gctggcaccc agtatgaaca gctcgtacag aagctcatgg 4021 aaacggatgg cgatcctaac tgcgtcctgt ggcgccatcc cattctgctg cacaccaaag 4081 acaccatcac cgcgccgctc tcatcaatgc acacggaaac catgcagccg gaggccatta 4141 agctcttcaa gagcattcag ctgttcatgt cggtggcggt caaccagccg ggcatcgatt 4201 accacgtggt gctcgcccag aacgccctgc aacatgctct ggatatgccc gagctgcaga 4261 cggagatgat ctgcatactg atcaagcaga cctcccgcca catgggccag aagctcagtg 4321 tcggcgtcca ggtaaacaag aagctgggca agcaaacgcg ccaactactg ttgtgcgcca 4381 cccaaagcct attcacctgt gatacccaac aggcgggcca cgcccaagcc aacggcagtt 4441 cgcccacctc catacaggct cctgctgcca cgcccataat cgactgcaaa agcaacccgc 4501 ccgcctacag cttcgtccag ggctggcagc tcctggccct ggccgtatcc ctctttgttc 4561 cgcgctcgag tcgcctgctg tggtacctca agctccactt gtcccggaat gcggatacaa 4621 agacagagac gggcaagtac gccgcctact gtgagcgcgc gctggagagg acgcttaaga 4681 acgggggccg cgagacgaaa ccgtcgcgga tggaggttct atcgattctc ctgaagaatc 4741 cctaccacca ctctctgccg catgcgattc ccgtgcacat gatgaacacc acctaccagg 4801 tggtttcctt tgatggctcc accaccatcg aggagttcca ggccactttg gcccacgaac 4861 tgggcacgcg ggatgccagc aatgggttct gcctattcag cgacgatcca attgagaagg 4921 atctggagca ctacctggag ccgctggcca agctgtgcga cgtgatcagc aaatgggaga 4981 cggctttaag ggagaaggga tcggggaagt ttgagaattc gcgggtgatc cagctgagct 5041 acaagaaccg tctctactgg aagcacacca ttaagtgcga gacggacaag gagcgcctgc 5101 tgctgtgcta ccagaccaac tcgcagattg tccagggccg attcccgcta tcccgggagt 5161 tggctttgga gctggcctcg ctgatgtccc agatcgacat gggcgactac tcgctggaga 5221 agtcccgcga cgtgggcgtg ggcctgaagg gtctggacaa gttctacccg tatcgctata 5281 gggacgcttt gggcgccgag cagctgaagg atgtgcagga gctgctggtc tccaagtgga 5341 tgctgctcaa gggtcgctcc acgctggact gtgtgcgcat ttacctcacc tgctgccgca 5401 agtggccgta tttcggagcc tgcctgttcc aggcgaagcc cagacagagc ccagaatcat 5461 ccatgggcac cacgggagca gccactccgg ttgcctggct ggcggtggcc gaggatgccc 5521 tcaacgtact cgagctgtcc accatggcgc cggtggccag gtatccatac agttcggtga 5581 tgacctttgg cggctgccag gacgacttta tgctggtggt ttcccacgac gacggcagcg 5641 gtgagcaaaa gctcctgttt gccatgagca agcccaagat tctggagatc acgctgctca 5701 tagcggacta catgaatgca ctgggccaca cggtgccagg aacgccgcag atgaactcgc 5761 tgacccgcaa cggatcgcat cgctcgctgc gagcctccca gcgtccgact ttgggggccg 5821 gcggctcggc ggtggccacc accaccgggt tctccacgaa cgccaccacc acggcccaca 5881 acacgctcaa ttcgcatgcg acgcacacgc tcaactcgaa ccactcgcac acgctgagca 5941 gctcccatca cgccggcggc ggcggaggag gaagtcagcc gggcacactg agctcgggtc 6001 atcatcatcc tcagcaccac caccatcacc agcagcagca gcagcaccac cagcctgata 6061 tactaaagag cacgccggat catcagagga tcaagtagat tggaactaag attcctaata 6121 gatcgagaag atagtagaga agatgggagg atcattgtac atagacggag gatcggatca 6181 cagcttaaca gacatatacg actaaacaga tacatatgca ccagcctagt ggcaacaaat 6241 atacacctaa agatagaaag atagaaagat ataaagatag atggatagat ggatagcggt 6301 agagagacga cgtagcgtaa tcggcctggg ttggaccttc ttctccttgc gcaccactca 6361 ctaaagttct ctttcctaag ctaacaacgg tactcgtact ctaaatctaa attgtaaaca 6421 aaaacagcag cagcagcaag catattatat atatattata aatttaattt ttttgaatag 6481 tcctaagtcc acgtacccca aaaaatgcaa gaggtatgtg aagaagaaga aacttaaacg 6541 taaacagaac atgaatctca atgtttagat tgttcttgtt cttgtcttat tattacctat 6601 tattaatatt atttttttgt atttttttta accaacaaac aagcagccac aatgcaaaac 6661 aacctataaa cacctataga aacgatatat ttgagtgttc tcgctcttcg atgctttgta 6721 atgaatctca atttgtaatt gtccctccat gcgcgaaact gccttttgaa tttgtagatg 6781 tcggagccaa gaacgagtaa aagcgaaaaa caaaaaagaa atcaagccaa aaacaagcaa 6841 actagcatta gcagaaacca attgagaaaa caagcaaata ttttgtaaag gatttttcaa 6901 gcccagtgca ggacgaccat caaccaagca tccccatcta catctagata tttacagtga 6961 agccccgatt cgtacggtta actgagggtc gatttctcaa tgtcatgtta tggttccggt 7021 tagttaactg tcagagaaaa ctaatttgag gttaaatggt tcggaagaac taaatcgttt 7081 tctcaatgtg atgttaattt aacctgaaat taacctgaac ttaacctgac attgagaaaa 7141 cggcccaaat acgataacgc gttcttagcc cgttcagtgt ctagatgtac aacacaaaaa 7201 ctcactcacc agagcttcag cagaaacctt aaacacacaa atgaaggtag tcaacaaaat 7261 tcggtagata aacacgcccc aattaattat tgcccacttt tttacacccg cgcccacaga 7321 agcatatatg cattcatata tatacatata gaatatatag aaggcagacg gcagaaggta 7381 tacatgtatt cggattcgat atttaacaaa attatacaca ccaaattaac gatataacaa 7441 acagtttata cggtaacagc gcattttttt cctaattgta aagatttgat attacaaatt 7501 tatatgcgcc gagacgcaac gaaaacgaaa atggaaatta aacgagaaaa cgagagatcg 7561 aacagagcat ctcattggga agaatcgaag aaaatcgaag gcttgcaagt ggatataaac 7621 tatataggcg aatgtatcac acatcacact ccagtgaaac gaaatatata taaagggaaa 7681 ttaacgatta aaactaaacc aaaaatga