PREDICTED: Drosophila takahashii suppression of retinal

LOCUS       XM_070218660            1251 bp    mRNA    linear   INV 09-DEC-2024
            degeneration disease 1 upon overexpression 1 (LOC108056742),
            transcript variant X3, mRNA.
ACCESSION   XM_070218660
VERSION     XM_070218660.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1251
                     /gene="LOC108056742"
                     /note="suppression of retinal degeneration disease 1 upon
                     overexpression 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:108056742"
     CDS             71..883
                     /gene="LOC108056742"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase RNF185"
                     /protein_id="XP_070074761.1"
                     /db_xref="GeneID:108056742"
                     /translation="MEEPKMELPTTSSGASSSSIQPTENVSYDKIAWSSRDITEPLAE
                     ESATSQLRPLGTSISADSTAEASASNTSYSFTGDYLSGGNKADLKSTSSEAESGPKAA
                     EKDKEKEQNDESLYECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKA
                     AVDKDKVIPLYGRNSTHQEDPRNKVPPRPAGHRTEPDPAPGFPGFGFGDGFHMSFGIG
                     AFPFGFITSSLNFGEPRPAAANRGTTQYEDEQTLSKLFLYLAFMCIAWLFFT"
     misc_feature    416..586
                     /gene="LOC108056742"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 185 (RNF185) and similar proteins; Region:
                     RING-HC_RNF185; cd16744"
                     /db_xref="CDD:438402"
     polyA_site      1251
                     /gene="LOC108056742"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgcattcgaa tgcccttgct ggctgaacgt cgaaaactaa ctcggttatc agcatcctgg
       61 gcgaacaacc atggaagagc cgaaaatgga gctgcccacc acatcgtcgg gggcatcctc
      121 atcctccatc caacccactg aaaacgtgag ctacgacaag atcgcctggt catcgcggga
      181 catcacagaa ccgctggcgg aggagtccgc caccagtcaa ttgcgacccc tgggcacctc
      241 gatctcagcc gattcgacgg ctgaggccag tgcatccaac acatcgtact ccttcacagg
      301 cgactacctt tccgggggca acaaggcgga tttgaagtcc acctcctcgg aggcggaaag
      361 tgggccaaag gccgccgaga aggacaagga gaaggagcag aacgacgagt cgctctacga
      421 gtgcaacatt tgcctggaca cggccaagga tgcggtggtc agcatgtgtg ggcacctctt
      481 ctgctggccc tgcctgcacc agtggctcct gacgcgaccc aatcgcaagc tatgtcccgt
      541 ctgcaaggcg gccgtcgaca aggacaaggt cataccgctc tacggcagga atagtacaca
      601 ccaggaagat cctcgaaaca aagttccacc acgccccgct ggccatcgta cagaaccaga
      661 tcctgctccc ggttttcctg gcttcggatt cggcgacggc tttcacatgt ccttcggcat
      721 cggcgccttt ccctttggct tcataacatc ttcactaaat ttcggcgagc ctcgtcctgc
      781 tgctgccaat cgtggcacaa cgcaatacga ggacgagcag accctttcca agctcttttt
      841 gtatctggcc ttcatgtgca tcgcctggct gttcttcaca tagccagctg agggccccta
      901 agatcataac ttgtattgaa atgcgcatgg acggcgtccg aagtaatcat attgcagtat
      961 cctccagtta aagcaacaac aatattctta aacacgttgg gtaaaaaagt aaaagtcgtt
     1021 ggtgtaatta actaaagaat aaatctacta ctttttcggt tcaaattgtg aaagagaaaa
     1081 atggataatg gatgggaatg tgcaatcccc atgctatttc aaatagttca acatataaaa
     1141 tcatttcttc tgtatgttct cggatcgcat tgatttaata aaaaaaagta gttgtcaaaa
     1201 aatgtaaaaa tatatatata tataataata aagtcaataa tacaaaatga a