PREDICTED: Drosophila takahashii suppression of retinal

LOCUS       XM_070218658            1369 bp    mRNA    linear   INV 09-DEC-2024
            degeneration disease 1 upon overexpression 1 (LOC108056742),
            transcript variant X2, mRNA.
ACCESSION   XM_070218658
VERSION     XM_070218658.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1369
                     /gene="LOC108056742"
                     /note="suppression of retinal degeneration disease 1 upon
                     overexpression 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:108056742"
     CDS             189..1001
                     /gene="LOC108056742"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase RNF185"
                     /protein_id="XP_070074759.1"
                     /db_xref="GeneID:108056742"
                     /translation="MEEPKMELPTTSSGASSSSIQPTENVSYDKIAWSSRDITEPLAE
                     ESATSQLRPLGTSISADSTAEASASNTSYSFTGDYLSGGNKADLKSTSSEAESGPKAA
                     EKDKEKEQNDESLYECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKA
                     AVDKDKVIPLYGRNSTHQEDPRNKVPPRPAGHRTEPDPAPGFPGFGFGDGFHMSFGIG
                     AFPFGFITSSLNFGEPRPAAANRGTTQYEDEQTLSKLFLYLAFMCIAWLFFT"
     misc_feature    534..704
                     /gene="LOC108056742"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 185 (RNF185) and similar proteins; Region:
                     RING-HC_RNF185; cd16744"
                     /db_xref="CDD:438402"
     polyA_site      1369
                     /gene="LOC108056742"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cggcaggtat cgtccgagca attgttttga ggtgttaaga cgtcaattga taaattacca
       61 attttaccac aattcacctg atttttccac tcaccccttt gataacggtc ctcgatttgg
      121 tgcatttaca ttgagcacgg ctgaacgtcg aaaactaact cggttatcag catcctgggc
      181 gaacaaccat ggaagagccg aaaatggagc tgcccaccac atcgtcgggg gcatcctcat
      241 cctccatcca acccactgaa aacgtgagct acgacaagat cgcctggtca tcgcgggaca
      301 tcacagaacc gctggcggag gagtccgcca ccagtcaatt gcgacccctg ggcacctcga
      361 tctcagccga ttcgacggct gaggccagtg catccaacac atcgtactcc ttcacaggcg
      421 actacctttc cgggggcaac aaggcggatt tgaagtccac ctcctcggag gcggaaagtg
      481 ggccaaaggc cgccgagaag gacaaggaga aggagcagaa cgacgagtcg ctctacgagt
      541 gcaacatttg cctggacacg gccaaggatg cggtggtcag catgtgtggg cacctcttct
      601 gctggccctg cctgcaccag tggctcctga cgcgacccaa tcgcaagcta tgtcccgtct
      661 gcaaggcggc cgtcgacaag gacaaggtca taccgctcta cggcaggaat agtacacacc
      721 aggaagatcc tcgaaacaaa gttccaccac gccccgctgg ccatcgtaca gaaccagatc
      781 ctgctcccgg ttttcctggc ttcggattcg gcgacggctt tcacatgtcc ttcggcatcg
      841 gcgcctttcc ctttggcttc ataacatctt cactaaattt cggcgagcct cgtcctgctg
      901 ctgccaatcg tggcacaacg caatacgagg acgagcagac cctttccaag ctctttttgt
      961 atctggcctt catgtgcatc gcctggctgt tcttcacata gccagctgag ggcccctaag
     1021 atcataactt gtattgaaat gcgcatggac ggcgtccgaa gtaatcatat tgcagtatcc
     1081 tccagttaaa gcaacaacaa tattcttaaa cacgttgggt aaaaaagtaa aagtcgttgg
     1141 tgtaattaac taaagaataa atctactact ttttcggttc aaattgtgaa agagaaaaat
     1201 ggataatgga tgggaatgtg caatccccat gctatttcaa atagttcaac atataaaatc
     1261 atttcttctg tatgttctcg gatcgcattg atttaataaa aaaaagtagt tgtcaaaaaa
     1321 tgtaaaaata tatatatata taataataaa gtcaataata caaaatgaa