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LOCUS XM_070218631 3682 bp mRNA linear INV 09-DEC-2024 (LOC108067716), transcript variant X3, mRNA. ACCESSION XM_070218631 VERSION XM_070218631.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3682 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3682 /gene="LOC108067716" /note="synaptic vesicle glycoprotein 2C; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108067716" CDS 821..2725 /gene="LOC108067716" /codon_start=1 /product="synaptic vesicle glycoprotein 2C" /protein_id="XP_070074732.1" /db_xref="GeneID:108067716" /translation="MVEGDSAKGKSESYNVEAGLQPNYNQSAASNQASNHPTGQLANS SATGNATSHIDNRAIIQPYSLGQGAKQPEYQFAADNRAYEPDSHASNGKQQDVERDAP DNGGHGGHGGHGKGKVGKGRKKSIPLPEPTAPICANFERAIELCGYGKFHYILLAICG LVSTSEEMDVISMSFILPSAECDLNLNTETKGWLNSIIFIGMMVGAYFWGSIADSFGR KKVLIVISFMNAFCIVASSFSQSYSFFMLFRFLNGAALGGSGPVIWSYFAEFQPKAKR GSMLSFMAAFWTFGNLFVASLAWLIIPRTIGVTTPYFTYNSWRIFLLVCSLPSFLVGF LLFYLPESPKFLLTRGKKDRALAIFRGIFVTNTKRRPDEYMVYDLEVDEKLLESNGSV KNKYSRMISGMVDHSRALFKSPILRFTIVSITINFTFHIGYYGLLMWFPELFNRFEEY EKEFPHNSASVCDVTDYVVQLGHDQSKNGTCVSDIPQSVFMESLISLASALPANLLAI LGMDMLGRKFFLIAGTMTAGICSALMYFVRNSVQNLVVSAIFSGAISAANAALDCLIT EVFPTKLRATGVAISMVAARLGGIIGNIVIAQLLDNYCPSPTFIVSGLLIGGGLMCLL LPNTTRKELN" misc_feature <1235..2704 /gene="LOC108067716" /note="synaptic vesicle protein SV2; Region: synapt_SV2; TIGR01299" /db_xref="CDD:130366" ORIGIN 1 gattatccga tacagaaaaa aaaaaataaa taaaactaat aaaaaaaaat aaagaatccc 61 aataaagcgt aataaaaatt acacataaaa taaatcgttt agtgataccc aggcctattg 121 cgattcccag gcgttgccaa ataccaattg aaatttctag agcgtgaaaa gcgttcaatt 181 tgaatgaatt acaaactaaa aggctaaaca aaaaatatat acaacaaaat taaccagcat 241 taaccaagca aataaaagga aaatcgaacc actaaagcac ctggcaagag tccaaattat 301 aaacacacat tttgcagcgt cgaaagcatc aacaaatcgt acaagttgga aaaaacagcg 361 gaaaactttg tttccaattc cgagcatcaa taaaaaacaa agaaaaatca aaaggaatgc 421 gagtcacgtt aaccgaagtg gaaaaaagcc agaaacgcca atcagttgcc cgatcgataa 481 tatttcgagt ataaggaaaa gaaaaggcgc ccgagagcca agaacatagt ctgcgacacc 541 aaaaagcagc gataactatt tgaatggaag caatatcgca gctcaatcgg ccacaaagcg 601 ataaaaccga tagcaaggac gtggaagaaa aggcgccgat aacgagactt gtgcattgcc 661 acgcccaccg ctaccgagaa gagaccgtta agcgaggcag acacaactgt acccatctaa 721 gcagagctta gagcaaaaag ccaacaaaaa accccgcaag ataatcccaa tttccttttt 781 gctacgcgca caagaagcca aaaaacccct gaactataga atggtagaag gtgattccgc 841 aaagggcaaa agcgaatcct ataatgtaga agctggacta caaccaaact acaaccagag 901 cgcagcaagc aaccaagcaa gcaaccatcc cactggccaa ctggctaact cctcagccac 961 cggcaacgcg acctcgcaca tcgacaaccg agcgatcatc cagccgtact ccttgggcca 1021 aggagccaag cagccggagt atcagttcgc ggcggacaat cgggcatacg agcccgatag 1081 ccatgccagc aatggcaagc agcaggacgt agagcgggac gcccccgata acgggggtca 1141 cgggggtcac gggggtcatg gcaagggcaa ggtgggaaag ggccggaaga agtccatacc 1201 cttgccggaa ccgaccgctc cgatatgcgc caatttcgag agggccatcg aattgtgcgg 1261 ctatggcaag ttccattata tactgctggc catctgcgga ttggtcagca catcggagga 1321 aatggacgtc atctcgatgt ccttcatcct gccgtcggcg gagtgtgatc tgaatctgaa 1381 tacggagacc aagggatggc tgaactcgat catcttcatc ggcatgatgg tgggcgccta 1441 cttctggggc agcatcgccg acagcttcgg tcgcaagaag gtcctcatcg tcatctcgtt 1501 catgaacgcc ttctgcatcg tcgcctcgtc cttctcgcag tcctacagct tcttcatgct 1561 cttccggttc ctcaatggtg cagctttggg cggcagcggt cctgtgatct ggtcgtactt 1621 cgccgaattc caaccgaagg cgaagcgcgg ctccatgctg agcttcatgg ccgccttctg 1681 gacgttcggc aacctgttcg tggccagcct ggcctggctg atcataccgc gaacgatcgg 1741 cgtgacgacg ccgtacttca cctacaactc gtggaggatc ttcctgctgg tctgctcact 1801 gccctcgttc ctggtgggct tcctgctctt ctatctgccc gaatcgccga aattcctgtt 1861 gacgcgcggc aagaaggatc gcgccctggc cattttccgt ggcattttcg tgacgaacac 1921 gaagcgtcgt cccgacgagt acatggtcta cgacctggag gtcgacgaga agctgctgga 1981 gagcaacggc agtgtgaaga acaagtacag ccgcatgatc tccggaatgg tcgaccacag 2041 ccgcgccttg ttcaagtcgc ccatcctgcg attcaccatc gtctcgatca cgatcaactt 2101 tacattccac attggctact acggcctact gatgtggttc ccggagctct tcaatcgctt 2161 cgaggagtac gagaaggaat tcccccacaa ctcggcgagc gtttgcgacg tcaccgacta 2221 tgtggtccaa ttgggtcacg atcagagcaa gaacggcacc tgcgtctcgg atattccgca 2281 gtcggtgttc atggagtcgc tgatatcgct ggccagcgcc ctgcccgcca atctgctggc 2341 catcctcggc atggacatgc tgggcaggaa gttcttcctg atcgccggca ccatgaccgc 2401 cggcatctgc tcggcgctga tgtactttgt gcgcaactcc gtccagaatc tcgtcgtctc 2461 ggccatcttc agtggcgcca tttcggcggc caatgccgcc ctggactgcc tcatcaccga 2521 agtattcccc accaagctga gggccaccgg cgtggccatt tcgatggtgg ccgcccgcct 2581 gggcggcatc attggcaaca tcgtgatcgc ccagctgctg gacaactact gtccctcgcc 2641 cacgttcatt gtgtcgggtc tgctcattgg cggcggtctc atgtgcctcc tcttacccaa 2701 tacgacgcgc aaggaactca attagatgtg cctaaataac taacgatagc tcccgtacac 2761 ccagattaca aaaagaccca tagaatcaaa accatttgcc ttgctttgag ttgagatttt 2821 gatacttttt catgtcacaa agaaaaagtt tttttttcca acctacaaat atcaacttaa 2881 caaggatttt taaagagttc aaacactttc cccttcaaaa aatcagccat agaatgcccc 2941 tcccctcaag taatttccat tcgccccaat cccgccagag gatcggggtt tatctgtgta 3001 tatatggtat gtgtgtgcta caatacacga ttatttgtat cgtcagtaat tatttaacga 3061 tagcgataac gattttcttt gtgtgtctaa ttttaaaagc ccccctctcc ccttccccac 3121 ccctacgaaa atatctatct aactatttgg aatttaaacg aaccaaccaa aatcagaaac 3181 gggcatacca aactgataag caaagaaaac cccaagccag cgagaagata tagcaggtag 3241 gatcgatgca aatcgatgaa tatgtttatg tacgatatgt agagagtaat atatatattt 3301 ggcaagcgcc ggcgccggct gaagcagcag cagaggggct gggtaacggt aaagatacag 3361 ataaagataa agacccgaga agcagaaccc aaaataatct tatgggaggt ctatagtatc 3421 gctatcgttc tcgccaccct gctgtccgtt attgttgtta ttattgctat tattaatgca 3481 tccaatgtaa aacacatacg tatataactt tatctatata ttaaacatat atcaaaacca 3541 aaattttttt tgtttttttt tttcgtcatg taggaccaaa gcacaggaag tgaaagaata 3601 tttgtaaaat ttagttacgt tattacaagt tacgctacat atatacaaca aaaaactaat 3661 aaacaaaaaa agaacaaacc ac